RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Zfp263Q8CF60 680 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tasp1Q8R1G1 420 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 MlklQ9D2Y4 472 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Slc12a4Q9JIS8 1085 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Caln1Q9JJG7 219 aa13.49□□□□□ -0.25
Nup88-203ENSMUST00000108531 Zc3h7aE9PWW6 970 aaKnown RBP13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Gm3371F7CQW8 167 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tekt5G5E8A8 557 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Stra6O70491 670 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Magea6O89010 325 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Pdcd2P46718 343 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 SftpdP50404 374 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Dynlt1P51807 113 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 MafP54843 370 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Prmt9Q3U3W5 846 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Psg28Q4KL66 472 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Fam214aQ69ZK7 1075 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Crybg3Q80W49 1005 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Adgra1Q8C4G9 578 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ccdc80Q8R2G6 949 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Lman1lQ8VCD3 505 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 TgdsQ8VDR7 355 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Cttnbp2nlQ99LJ0 638 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Q9CPS8 106 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Copg2Q9QXK3 871 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Asb1Q9WV74 336 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 MycsQ9Z304 431 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Slc8a3S4R2P9 928 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Apol11aE9PZG0 334 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Farp1F8VPU2 1048 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 RpsaP14206 295 aaKnown RBP13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 PtpraP18052 829 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Hif1aQ61221 836 aaKnown RBP13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Psd2Q6P1I6 770 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Dync1li2Q6PDL0 492 aaKnown RBP13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 PrcpQ7TMR0 491 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Olfr670Q7TRP3 312 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Rcn2Q8BP92 320 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 PygbQ8CI94 843 aaKnown RBP13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ablim1Q8K4G5 861 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Pofut2Q8VHI3 429 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Bco2Q99NF1 532 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Decr1Q9CQ62 335 aaKnown RBP13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mageb3Q9D2H4 330 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Cry2Q9R194 592 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ror2Q9Z138 944 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mbd1Q9Z2E2 636 aa13.48□□□□□ -0.25
Nup88-203ENSMUST00000108531 Olfr1305A2AVW3 312 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Vmn2r39L7N2E5 861 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 DldO08749 509 aaKnown RBP13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Timm44O35857 452 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Il2rbP16297 539 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mov10P23249 1004 aaKnown RBP13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ythdf1P59326 559 aaKnown RBP13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ripply1Q2WG77 201 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 CblbQ3TTA7 982 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ppp1r13lQ5I1X5 824 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Gpatch2lQ6PE65 482 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Trpm4Q7TN37 1213 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Q8BGA7 448 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Rhpn2Q8BWR8 686 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Cog3Q8CI04 820 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Arhgap18Q8K0Q5 663 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Fam151aQ8QZW3 608 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Pomgnt1Q91X88 660 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 MutyhQ99P21 515 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 MceeQ9D1I5 178 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mrps9Q9D7N3 390 aaKnown RBP13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tekt1Q9DAJ2 418 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 HemgnQ9ERZ0 503 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Slc13a1Q9JHI4 594 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Actl7bQ9QY83 418 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Gm29133A0A1B0GT72 266 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ptpn3A2ALK8 913 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Atp8b4A2ANX3 1194 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tatdn2B7ZNL9 783 aaKnown RBP13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 NumblO08919 604 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 GclmO09172 274 aaKnown RBP13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Cdh16O88338 830 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Il3P01586 166 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 AlplP09242 524 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Irf3P70671 419 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mphosph8Q3TYA6 858 aaKnown RBP13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mea1Q64327 174 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Tas2r109Q7M707 316 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Mamdc2Q8CG85 686 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Usp33Q8R5K2 909 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Bbs5Q9CZQ9 341 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Nt5c3aQ9D020 331 aa13.47□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ms4a14A0A087WSD2 1232 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Ankfn1A0A140LIW7 1083 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Lta4hP24527 611 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Klf1P46099 358 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Scarf2P59222 833 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Sem1P60897 70 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Kpnb1P70168 876 aaKnown RBP13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Grb7Q03160 535 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Gm29609Q3UU56 907 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Xlr3cQ61806 226 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Chn2Q80XD1 332 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms