RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Plekha7Q3UIL6 1118 aaKnown RBP16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 PighQ5M9N4 188 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Hmgb4Q6P8W9 181 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Cspg5Q71M36 566 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Ric8bQ80XE1 520 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Gucy1b2Q8BXH3 824 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Zfp266E9Q2S7 604 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Plin2P43883 425 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 McuQ3UMR5 350 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Q8BL95 290 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Gprc6aQ8K4Z6 928 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Mad2l2Q9D752 211 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Klhl4B1AZR0 717 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Vmn2r104E9Q2J5 860 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Gm5849J3QPE5 117 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Gm3755K7N743 167 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Gpr101Q80T62 511 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Fam210aQ8BGY7 273 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 GancQ8BVW0 898 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Taf5Q8C092 801 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Ttc8Q8VD72 515 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Hs6st1Q9QYK5 411 aa16.99■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Crabp2P22935 138 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Lrpap1P55302 360 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Gjb4Q02738 266 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Tex24Q5DP50 351 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Dennd5aQ6PAL8 1287 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Fam102aQ78T81 392 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Elmo2Q8BHL5 732 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Ugt2b34Q8K154 532 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Zcchc18Q8VD24 393 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Nrbp2Q91V36 499 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Necab2Q91ZP9 389 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Dbndd1Q9CZ00 160 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Atp8b4A2ANX3 1194 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Armt1A6H630 439 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Ikzf3O08900 507 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Soat2O88908 525 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Scd1P13516 355 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Arf4P61750 180 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Smu1Q3UKJ7 513 aaKnown RBP16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Ntrk3Q6VNS1 825 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Mtmr10Q7TPM9 771 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Rft1Q8C3B8 541 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Cdhr1Q8VHP6 859 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Rfc4Q99J62 364 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 FignQ9ERZ6 759 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Htra2Q9JIY5 458 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Abca5Q8K448 1642 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Atn1O35126 1175 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Nedd4P46935 887 aaKnown RBP16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Msx3P70354 204 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Tdpoz2Q717B2 364 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Plekha8Q80W71 519 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Eif4bQ8BGD9 611 aaKnown RBP16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Ifi44Q8BV66 422 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 PaoxQ8C0L6 504 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Wdr37Q8CBE3 496 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Slc18a1Q8R090 521 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Agap3Q8VHH5 910 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 YwhabQ9CQV8 246 aaKnown RBP16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Neu2Q9JMH3 379 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 H2afyQ9QZQ8 372 aaKnown RBP16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Ddx39bQ9Z1N5 428 aaKnown RBP16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Lmtk2Q3TYD6 1471 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Gm45233A0A0N4SVE0 221 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Bpifb9bA2AJD1 591 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Ccnb1ip1D3Z3K2 276 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Gm5152L7N200 190 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Fads2p1Q0VAX3 487 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Bpifb9aQ80XI7 591 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 MispQ9D279 648 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 EtfbQ9DCW4 255 aaKnown RBP16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Mbd2Q9Z2E1 414 aa16.98■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Smok3cA0A087WSF2 504 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Itih4A6X935 942 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Apoa4P06728 395 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 CrklP47941 303 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Ankrd13bQ5F259 626 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 TgdsQ8VDR7 355 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Mccc1Q99MR8 717 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 1600015I10RikE9Q745 711 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Bmpr2O35607 1038 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 CidecP56198 239 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Col1a2Q01149 1372 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Ccdc85cE9Q6B2 420 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Mtnd4P03911 459 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 AdslP54822 484 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Ythdf1P59326 559 aaKnown RBP16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Fam172aQ3TNH5 417 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Gm8773Q3UQ24 132 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 PigsQ6PD26 555 aaKnown RBP16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 PccaQ91ZA3 724 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Bcs1lQ9CZP5 418 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 TcimQ9D915 106 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Usp12Q9D9M2 370 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 WizO88286 1684 aaKnown RBP16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Stat3P42227 770 aaKnown RBP16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Slc2a13Q3UHK1 637 aa16.97■□□□□ 0.31
Col17a1-202ENSMUST00000086923 Pum3Q8BKS9 647 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms