RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Ccdc182Q9D9C6 152 aa11.16□□□□□ -0.62
Trim61-201ENSMUST00000078409 Abcb9Q9JJ59 762 aa11.16□□□□□ -0.62
Trim61-201ENSMUST00000078409 Nr1h3Q9Z0Y9 445 aa11.16□□□□□ -0.62
Trim61-201ENSMUST00000078409 Rbbp8nlA2ABX0 614 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Rsbn1lD3Z0K6 821 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Gm6351K9J7D1 481 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 MntO08789 591 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Chil3O35744 398 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Tph1P17532 447 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 TaglnP37804 201 aaKnown RBP11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Gpc4P51655 557 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Slc12a2P55012 1205 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Shox2P70390 331 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Atf4Q06507 349 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Q14AM7 275 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Tp53i13Q5F267 385 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 GcdhQ60759 438 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Cln3Q61124 438 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 GmipQ6PGG2 971 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Trnau1apQ80VC6 287 aaKnown RBP11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 1700001K19RikQ80ZT1 219 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Lrrtm3Q8BZ81 582 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Morc2bQ8C5W4 1022 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Tbc1d14Q8CGA2 694 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Gin1Q8K259 518 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Vmn1r218Q8R261 298 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Dnajc28Q8VCE1 385 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Zcchc18Q8VD24 393 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Pcdhga4Q91XY4 930 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Pcdha5Q91Y15 934 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Bap1Q99PU7 728 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 ZwintQ9CQU5 252 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Gadd45gip1Q9CR59 222 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Desi2Q9D291 194 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Trpv4Q9EPK8 871 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Vps35Q9EQH3 796 aaKnown RBP11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 PodxlQ9R0M4 503 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Tpk1Q9R0M5 243 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Myh7bA2AQP0 1941 aa11.15□□□□□ -0.62
Trim61-201ENSMUST00000078409 Gm11758A2BEI6 360 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Gm11757A2BEI8 360 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Gm11239E9Q5Z9 360 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Gm11237F2Z3W5 360 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Gm11238F2Z478 360 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Zfp846G3X996 541 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Gm11236J3QMS7 360 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Vwa3bJ9JI28 736 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Enc1O35709 589 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Olfm1O88998 485 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 CatspereP0DP43 985 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Tcea1P10711 301 aaKnown RBP11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Rag1P15919 1040 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Tnnc2P20801 160 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Pde1bQ01065 535 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Ikzf1Q03267 517 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 NpeppsQ11011 920 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Gm3414Q3TNU4 584 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Gdpd4Q3TT99 632 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Gm428Q3UTE2 360 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Zp3rQ60736 579 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 FaddQ61160 205 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 PnocQ64387 187 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Adgrg6Q6F3F9 1165 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Ttyh3Q6P5F7 524 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Bud31Q6PGH1 103 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Sh3tc2Q80VA5 1289 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Tmem11Q8BK08 190 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 TdrpQ8C5P7 182 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Onecut3Q8K557 490 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Hid1Q8R1F6 788 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Vmn1r185Q8R299 319 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Bst2Q8R2Q8 172 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Washc1Q8VDD8 475 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Rassf3Q99P51 232 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Med30Q9CQI9 178 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 XpotQ9CRT8 963 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Snx29Q9D3S3 818 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Serpinb12Q9D7P9 423 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Pmepa1Q9D7R2 260 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 DpysQ9EQF5 519 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 FarsbQ9WUA2 589 aaKnown RBP11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Htatip2Q9Z2G9 242 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Scn3aA2ASI5 1947 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Gm36210A0A1B0GS00 229 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Tmem238lA0A1B0GS74 79 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Zfp993A2A8V4 313 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Dnajc25A2ALW5 357 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Olfr1145A2AVC7 325 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Zfp992B1ASD8 573 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Mmrn1B2RPV6 1210 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 TroapB7ZNG4 668 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Itgb1P09055 798 aaKnown RBP11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Gng11P61953 73 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Sec31bQ3TZ89 1158 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Agap2Q3UHD9 1186 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Ccdc106Q3ULM0 279 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Fam8a1Q3URQ4 399 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Ermp1Q3UVK0 898 aaKnown RBP11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 Glra4Q61603 456 aa11.14□□□□□ -0.63
Trim61-201ENSMUST00000078409 RetsatQ64FW2 609 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms