RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Alg13Q9D8C3 1166 aaKnown RBP12.58□□□□□ -0.4
Upk3b-201ENSMUST00000062606 1700123K08RikQ9D991 295 aa12.58□□□□□ -0.4
Upk3b-201ENSMUST00000062606 EqtnQ9D9V2 337 aa12.58□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Natd1Q9DBW3 110 aa12.58□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Pold3Q9EQ28 462 aa12.58□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Trpc4apQ9JLV2 797 aa12.58□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Maged1Q9QYH6 775 aaKnown RBP12.58□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Ror2Q9Z138 944 aa12.58□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Fam171a1A2ATK9 892 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Hsf3D0VYS2 492 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Hcn4O70507 1186 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Prl2c3P04768 224 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Hoxd11P23813 323 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Msh2P43247 935 aaKnown RBP12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Lzts1P60853 599 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Patl1Q3TC46 770 aaKnown RBP12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Zcchc2Q69ZB8 1166 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Cdc14aQ6GQT0 603 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Tcp10aQ80W76 438 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Thap3Q8BJ25 218 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Ccdc122Q8BVN0 290 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 H2-Q4Q8HWB2 354 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Marc2Q922Q1 338 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Spata17Q9D552 379 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Myh11O08638 1972 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 UtrnE9Q6R7 3430 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Ms4a4aA0A087WRT7 236 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 JrklB2RRL2 523 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Gm1661E9Q963 441 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Serpinb3aG3X9V8 387 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 F10O88947 481 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Gjc1P28229 396 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 PuraP42669 321 aaKnown RBP12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Tff2Q03404 129 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Hddc2Q3SXD3 199 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 StilQ60988 1262 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 KaznQ69ZS8 779 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 March6Q6ZQ89 909 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Prr14Q7TPN9 612 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 PdgfcQ8CI19 345 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Lmbrd1Q8K0B2 537 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 FggQ8VCM7 436 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Stx17Q9D0I4 301 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Lrrc57Q9D1G5 239 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Itm2bO89051 266 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Casp14O89094 257 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Tarbp2P97473 365 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Fam193bQ3U2K0 892 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Dnajc1Q61712 552 aaKnown RBP12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Ntan1Q64311 310 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 PicalmQ7M6Y3 660 aaKnown RBP12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Ece2Q80Z60 881 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Drd5Q8BLD9 478 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Ildr1Q8CBR1 537 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Zbtb44Q8R0A2 453 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Vopp1Q8R1C3 172 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Prmt7Q922X9 692 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Clvs1Q9D4C9 354 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Xrn2Q9DBR1 951 aaKnown RBP12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Tnfsf13bQ9WU72 309 aa12.57□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Gm36028A0A0U1RPM1 299 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Tbkbp1A2A9T0 611 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 NumblO08919 604 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 BhmtO35490 407 aaKnown RBP12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 RarbP22605 482 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 TtlP38585 377 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Cyp2c39P56656 490 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Xkr4Q5GH67 647 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Aldh1a2Q62148 518 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Phlda1Q62392 405 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Map3k10Q66L42 940 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Cyfip1Q7TMB8 1253 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 TdrpQ8C5P7 182 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Arhgef3Q91X46 524 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Fkbp6Q91XW8 327 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 CtsqQ91ZF4 343 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Dqx1Q924H9 718 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Cttnbp2nlQ99LJ0 638 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Ska1Q9CPV1 254 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Mbtps1Q9WTZ2 1052 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Noc2lQ9WV70 747 aaKnown RBP12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Arid2E9Q7E2 1828 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Chil3O35744 398 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Pms2P54279 859 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Pcbp1P60335 356 aaKnown RBP12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Samhd1Q60710 627 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 AgpsQ8C0I1 645 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Cacnb1Q8R3Z5 597 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Gbe1Q9D6Y9 702 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Rexo2Q9D8S4 237 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Caln1Q9JJG7 219 aa12.56□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Tbc1d16A2ABG4 766 aa12.55□□□□□ -0.4
Upk3b-201ENSMUST00000062606 TroapB7ZNG4 668 aa12.55□□□□□ -0.4
Upk3b-201ENSMUST00000062606 R3hdm1E9Q9Q2 1135 aaKnown RBP12.55□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Gm7942L7N277 499 aa12.55□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Vti1aO89116 217 aa12.55□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Cops2P61202 443 aaKnown RBP12.55□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Sox10Q04888 466 aa12.55□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Ssrp1Q08943 708 aaKnown RBP12.55□□□□□ -0.4
Upk3b-201ENSMUST00000062606 Fam205cQ80YD3 371 aa12.55□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms