RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Foxp2P58463 714 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Msx2Q03358 267 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Igsf9Q05BQ1 1179 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tnfaip8l3Q3TBL6 204 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Arid5aQ3U108 590 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Klhl14Q69ZK5 630 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Snx30Q8CE50 437 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cog3Q8CI04 820 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 UvragQ8K245 698 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Q99KU6 348 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mrps5Q99N87 432 aaKnown RBP10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rassf3Q99P51 232 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tmed5Q9CXE7 229 aa10.14□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Atf6F6VAN0 656 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 AlpiF8VPQ6 554 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Spin2fJ3QPU0 254 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Shoc2O88520 582 aaKnown RBP10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Stx3Q64704 289 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 CbarpQ66L44 698 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Fbxo44Q8BK26 255 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Clasp2Q8BRT1 1286 aaKnown RBP10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gbp9Q8BTS3 619 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ophn1Q99J31 802 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Scnn1bQ9WU38 638 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ly6iQ9WU67 134 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Atp6v0a1Q9Z1G4 839 aaKnown RBP10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 1700031M16RikA0A087WSH0 82 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ankfn1A0A140LIW7 1083 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rabgap1lA6H6A9 815 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Apold1E9Q0X2 246 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tekt5G5E8A8 557 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Impa1O55023 277 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 PrkchP23298 683 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tac1P41539 130 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Usp10P52479 792 aaKnown RBP10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 NrlP54846 237 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Sycp3P70281 254 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Alkbh5Q3TSG4 395 aaKnown RBP10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Garnl3Q3V0G7 1038 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Samhd1Q60710 627 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 SnrpaQ62189 287 aaKnown RBP10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Six1Q62231 284 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ankrd45Q810N6 248 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rassf9Q8K342 435 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ccdc80Q8R2G6 949 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Olfr615Q8VGY4 313 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ascc2Q91WR3 749 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Arhgef25Q9CWR0 618 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rpap3Q9D706 660 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ggps1Q9WTN0 300 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 TicrrQ8BQ33 1889 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Vmn2r104E9Q2J5 860 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cyp4f17G3UW78 524 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Prom1O54990 867 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Slc10a3P21129 473 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Arl4aP61213 200 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Atp6v1b2P62814 511 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mex3cQ05A36 652 aaKnown RBP10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 DselQ0VBN2 1207 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Slc24a2Q14BI1 711 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tars2Q3UQ84 723 aaKnown RBP10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tfdp2Q64163 446 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 2700097O09RikQ6PGK3 301 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gucy2gQ6TL19 1100 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gramd1bQ80TI0 738 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rhbdf2Q80WQ6 827 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Q80WR5 230 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Lamtor4Q8CF66 99 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 OgtQ8CGY8 1046 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Plekhh3Q8VCE9 796 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Olfr395Q8VGR3 312 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Epn3Q91W69 636 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pacsin3Q99JB8 424 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cyp4f16Q99N17 524 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Arl8bQ9CQW2 186 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 PmpcbQ9CXT8 489 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Trim42Q9D2H5 723 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Dpp7Q9ET22 506 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Limd1Q9QXD8 668 aa10.13□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gm4907B1AXB9 411 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Lilra5D3Z7A9 295 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 IapP03975 557 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mov10P23249 1004 aaKnown RBP10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Q3TQQ9 903 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gm8773Q3UQ24 132 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rbm20Q3UQS8 1199 aaKnown RBP10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 PighQ5M9N4 188 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rbl2Q64700 1135 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 DaglbQ91WC9 669 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pcdhb3Q91XZ7 784 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cpt1bQ924X2 772 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mphosph6Q9D1Q1 161 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cep72Q9D3R3 646 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ppp1r12aQ9DBR7 1029 aaKnown RBP10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Sfmbt1Q9JMD1 863 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pck1Q9Z2V4 622 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Dock5B2RY04 1868 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 AunipE9Q6Z5 340 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Sptlc1O35704 473 aa10.12□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Il2rbP16297 539 aa10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms