RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Nrif1Q923B3 828 aa11.99□□□□□ -0.49
Trim55-201ENSMUST00000029139 Trpd52l3Q9CQ14 231 aa11.99□□□□□ -0.49
Trim55-201ENSMUST00000029139 Mipol1Q9D9F8 279 aa11.99□□□□□ -0.49
Trim55-201ENSMUST00000029139 Kifc1Q9QWT9 674 aa11.99□□□□□ -0.49
Trim55-201ENSMUST00000029139 Mtmr9Q9Z2D0 545 aa11.99□□□□□ -0.49
Trim55-201ENSMUST00000029139 Zfp831A2ADM8 1628 aa11.99□□□□□ -0.49
Trim55-201ENSMUST00000029139 Frmpd4A2AFR3 1320 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Syngap1F6SEU4 1340 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 RptorQ8K4Q0 1335 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Spats1A2RRY8 269 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Vmn2r70K7N702 854 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Hcn3O88705 779 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Me1P06801 572 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Nedd1P33215 660 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 EsrrgP62509 458 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Ly9Q01965 654 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Slc27a5Q4LDG0 689 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Arhgef2Q60875 985 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Tlr13Q6R5N8 991 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 TpppQ7TQD2 218 aaKnown RBP11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Gramd1bQ80TI0 738 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Elmo2Q8BHL5 732 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 C1qtnf7Q8BVD7 289 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Hid1Q8R1F6 788 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Akr1d1Q8VCX1 325 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Fam114a2Q8VE88 497 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Afg3l1Q920A7 789 aaKnown RBP11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Q9CPS8 106 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Thg1lQ9CY52 298 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Erp44Q9D1Q6 406 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Calml3Q9D6P8 149 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Znf609Q8BZ47 1413 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Abcb11Q9QY30 1321 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Rnf19bA2A7Q9 732 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Zbed5B2RPU8 756 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Cyp2a22B2RXZ2 492 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Zfp408H7BX78 710 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Gm21972J3QN38 98 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Gdi1P50396 447 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 TgfbiP82198 683 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Zc3h15Q3TIV5 426 aaKnown RBP11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Llgl2Q3TJ91 1027 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Zfp868Q3UTQ6 422 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Nr1d2Q60674 576 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Klf2Q60843 354 aaKnown RBP11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Grid1Q61627 1009 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Kiaa1841Q68FF0 718 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Edrf1Q6GQV7 1239 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Krt72Q6IME9 520 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Slf2Q6P9P0 1278 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Tmem214Q8BM55 687 aaKnown RBP11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Phka2Q8BWJ3 1235 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Elmo3Q8BYZ7 720 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Nemp2Q8CB65 421 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Cplx3Q8R1B5 158 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Vmn1r185Q8R299 319 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Slc25a3Q8VEM8 357 aaKnown RBP11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 SfpqQ8VIJ6 699 aaKnown RBP11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Actrt2Q9D9L5 377 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Sorbs3Q9R1Z8 733 aa11.98□□□□□ -0.49
Trim55-201ENSMUST00000029139 Zfp612A0A1D5RMC2 672 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Gpr161B2RPY5 545 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Fam71aB7XG49 585 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 4930579F01RikE9Q3L6 325 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Svs3aF2Z472 265 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Ap1b1O35643 943 aaKnown RBP11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Ets1P27577 440 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 IppP28575 584 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Cd9P40240 226 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 S100a1P56565 94 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Shc3Q61120 474 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Jade3Q6IE82 823 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Ttyh3Q6P5F7 524 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Arhgap26Q6ZQ82 814 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Aggf1Q7TN31 711 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Actr5Q80US4 605 aaKnown RBP11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Rnaseh2bQ80ZV0 308 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Atl1Q8BH66 558 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Ptbp3Q8BHD7 523 aaKnown RBP11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 AcmsdQ8R519 336 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Pcdhgc3Q91XX1 934 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Uckl1Q91YL3 548 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 DmgdhQ9DBT9 869 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Pex3Q9QXY9 372 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Spint1Q9R097 507 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Gm45233A0A0N4SVE0 221 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Fbrsl1E9Q9T0 1031 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 MthfslL7N466 203 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Capn5O08688 640 aaKnown RBP11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Fgl2P12804 432 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 HdcP23738 662 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Gmeb2P58929 530 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Stx2Q00262 289 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Nr4a2Q06219 598 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 C87499Q3UX49 493 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Armcx5Q3UZB0 606 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Srrm1Q52KI8 946 aaKnown RBP11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Bpifb1Q61114 474 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Nab1Q61122 486 aa11.97□□□□□ -0.49
Trim55-201ENSMUST00000029139 Nr2e1Q64104 385 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms