RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Tdrd7Q8K1H1 1086 aaKnown RBP4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Actrt1Q9D9J3 376 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ccnyl1D3YUJ3 367 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Prdm15E9Q8T2 1174 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Hoxc8P09025 242 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Phka1P18826 1241 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Hoxa2P31245 372 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Prim2P33610 505 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Polr2fP61219 127 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 PrkcqQ02111 707 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 CybbQ61093 570 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fnip1Q68FD7 1165 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cyp4x1Q6A152 507 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Scn3bQ8BHK2 215 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Vmn1r199Q8R280 367 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Slc5a5Q99PN0 618 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lsm7Q9CQQ8 103 aaKnown RBP4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ten1Q9D7K2 161 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rpn2Q9DBG6 631 aaKnown RBP4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Usp29Q9ES63 869 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Sdr16c6Q05A13 316 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pik3r6Q3U6Q4 756 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Opa3Q505D7 179 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 C2cd5Q7TPS5 1016 aaKnown RBP4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Kcns3Q8BQZ8 491 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mapre2Q8R001 326 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Havcr2Q8VIM0 281 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rassf3Q99P51 232 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 PpihQ9D868 188 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ubiad1Q9DC60 336 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Plcg1Q62077 1302 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm3173A6NAS3 172 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Wdr72D3YYM4 1114 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm3020E9Q3J7 150 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm2897K7N6T7 172 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Snx3O70492 162 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rab21P35282 222 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 AdssP46664 456 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Capza2P47754 286 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Coq7P97478 217 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Klra9Q2TJJ8 266 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tatdn3Q3U1C6 294 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Nlrc4Q3UP24 1024 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Sfi1Q3UZY0 1216 aaKnown RBP4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tor4aQ8BH02 426 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm3411Q8C7R2 150 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Klhl11Q8CE33 709 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Zmynd11Q8R5C8 602 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 IrgqQ8VIM9 583 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Yipf1Q91VU1 306 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 GldcQ91W43 1025 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 MbipQ99LQ1 341 aa4.73□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Sec14l1A8Y5H7 715 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Unc13dB2RUP2 1085 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm38392E9Q2A2 434 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cbx3P23198 183 aaKnown RBP4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lpar1P61793 364 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mapk1P63085 358 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mageb5Q14AN0 366 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Emc10Q3TAS6 258 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Trip13Q3UA06 432 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Zbtb45Q52KG4 520 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cfap206Q6PE87 622 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tab1Q8CF89 502 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rfc4Q99J62 364 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 CoprsQ9CQ13 173 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Efhd2Q9D8Y0 240 aaKnown RBP4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 NagaQ9QWR8 415 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Khdrbs2Q9WU01 349 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Large1Q9Z1M7 756 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Grik3B1AS29 919 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Osbpl8B9EJ86 889 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Axin2O88566 840 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ifnb1P01575 182 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 SarsP26638 512 aaKnown RBP4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pbx1P41778 430 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 VdrP48281 422 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Phactr4Q501J7 694 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mettl25Q6NXH8 597 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Xpo1Q6P5F9 1071 aaKnown RBP4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tmc8Q7TN58 722 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Dnajc6Q80TZ3 938 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 SntnQ8C9X1 147 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Prl7b1Q8CGZ9 251 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pik3cgQ9JHG7 1102 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Trpc5Q9QX29 975 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Zcchc7B1AX39 541 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Vav1P27870 845 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Anxa5P48036 319 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gdf10P97737 476 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ccdc69Q3TCJ8 202 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Adad1Q5SUE7 619 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rabl6Q5U3K5 725 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cep95Q8BVV7 827 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Chchd6Q91VN4 273 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 PpidQ9CR16 370 aaKnown RBP4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Kctd14A0A0U1RNG7 287 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 L3mbtl1A2A5N8 826 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Raph1F2Z3U3 1266 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm5145F8VQ88 278 aa4.72□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms