RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	YER190C-B	P0CX94	160 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	YEL077W-A	P0CX95	160 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	YGR296C-B	P0CX96	160 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	YPL283W-B	P0CX97	160 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	YPR204C-A	P0CX98	160 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	YFL068W	P0CX99	160 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	YLL066W-A	P0CY00	160 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	YLL067W-A	P0CY01	160 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	VMA16	P23968	213 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	YTH1	Q06102	208 aa	Predicted RBP	4.15	□□□□□ -1.75
GDB1	YPR184W	CNB1	P25296	175 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	BDH1	P39714	382 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	ATP19	P81451	68 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	DGA1	Q08650	418 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	IGO2	Q9P305	131 aa		4.15	□□□□□ -1.75
GDB1	YPR184W	RDL1	Q12305	139 aa	Known RBP	4.14	□□□□□ -1.75
GDB1	YPR184W	NAT5	Q08689	176 aa		4.14	□□□□□ -1.75
GDB1	YPR184W	GRE1	Q08969	168 aa		4.14	□□□□□ -1.75
GDB1	YPR184W	ATP14	Q12349	124 aa		4.14	□□□□□ -1.75
GDB1	YPR184W	BLM10	P43583	2143 aa		4.14	□□□□□ -1.75
GDB1	YPR184W	RPL27B	P0C2H7	136 aa	Known RBP	4.14	□□□□□ -1.75
GDB1	YPR184W	KRE1	P17260	313 aa		4.14	□□□□□ -1.75
GDB1	YPR184W	VMA3	P25515	160 aa		4.14	□□□□□ -1.75
GDB1	YPR184W	VAM10	Q08474	114 aa		4.14	□□□□□ -1.75
GDB1	YPR184W	FSF1	Q12029	327 aa	Known RBP	4.14	□□□□□ -1.75
GDB1	YPR184W	FCY1	Q12178	158 aa		4.14	□□□□□ -1.75
GDB1	YPR184W	MRPL33	P20084	86 aa		4.14	□□□□□ -1.75
GDB1	YPR184W	NTF2	P33331	125 aa	Known RBP	4.14	□□□□□ -1.75
GDB1	YPR184W	AIM34	Q03673	198 aa		4.14	□□□□□ -1.75
GDB1	YPR184W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
GDB1	YPR184W	CYT2	Q00873	224 aa		4.13	□□□□□ -1.75
GDB1	YPR184W	YDR157W	A0A023PZE8	133 aa		4.13	□□□□□ -1.75
GDB1	YPR184W	UGX2	P32772	223 aa		4.13	□□□□□ -1.75
GDB1	YPR184W	DCV1	P43595	202 aa		4.13	□□□□□ -1.75
GDB1	YPR184W	YBL029C-A	Q3E756	94 aa		4.13	□□□□□ -1.75
GDB1	YPR184W	QCR8	P08525	94 aa		4.13	□□□□□ -1.75
GDB1	YPR184W	YKR041W	P36134	250 aa		4.13	□□□□□ -1.75
GDB1	YPR184W	FYV4	P38783	130 aa	Predicted RBP	4.13	□□□□□ -1.75
GDB1	YPR184W	YDR215C	Q12240	137 aa		4.13	□□□□□ -1.75
GDB1	YPR184W	RPS11A	P0CX47	156 aa	Known RBP	4.12	□□□□□ -1.75
GDB1	YPR184W	RPS11B	P0CX48	156 aa	Known RBP	4.12	□□□□□ -1.75
GDB1	YPR184W	CKS1	P20486	150 aa	Known RBP	4.12	□□□□□ -1.75
GDB1	YPR184W	YAR068W	P39564	161 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	DSK2	P48510	373 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	HPA2	Q06592	156 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	CWP2	P43497	92 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	EMC6	Q12431	108 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	YIL134C-A	Q45U18	67 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	YER039C-A	P0CD97	72 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	MRS3	P10566	314 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	COX10	P21592	462 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	SRP21	P32342	167 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	GSP1	P32835	219 aa	Known RBP	4.12	□□□□□ -1.75
GDB1	YPR184W	GSP2	P32836	220 aa	Known RBP	4.12	□□□□□ -1.75
GDB1	YPR184W	YNL217W	P40152	326 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	CIN5	P40917	295 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	PRP8	P33334	2413 aa	Known RBP	4.12	□□□□□ -1.75
GDB1	YPR184W	YNL208W	P40159	199 aa	Known RBP	4.12	□□□□□ -1.75
GDB1	YPR184W	SNO1	Q03144	224 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	YLR194C	Q05777	254 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	YBR182C-A	Q8TGU6	64 aa		4.12	□□□□□ -1.75
GDB1	YPR184W	MLF3	P32047	452 aa		4.11	□□□□□ -1.75
GDB1	YPR184W	YKL069W	P36088	180 aa		4.11	□□□□□ -1.75
GDB1	YPR184W	YCR041W	P37265	110 aa		4.11	□□□□□ -1.75
GDB1	YPR184W	YLR281C	Q05863	155 aa		4.11	□□□□□ -1.75
GDB1	YPR184W	MRL1	Q06815	381 aa		4.11	□□□□□ -1.75
GDB1	YPR184W	YGR240C-A	Q3E786	66 aa		4.11	□□□□□ -1.75
GDB1	YPR184W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.11	□□□□□ -1.75
GDB1	YPR184W	VAR1	P02381	398 aa		4.11	□□□□□ -1.75
GDB1	YPR184W	ARC15	P40518	154 aa	RIP-Chip data	4.11	□□□□□ -1.75	not detected
GDB1	YPR184W	AGE2	P40529	298 aa		4.11	□□□□□ -1.75
GDB1	YPR184W	YER135C	P40082	130 aa		4.11	□□□□□ -1.75
GDB1	YPR184W	YIL002W-A	Q3E7Z5	69 aa		4.11	□□□□□ -1.75
GDB1	YPR184W	YKL044W	P36092	106 aa		4.1	□□□□□ -1.75
GDB1	YPR184W	ATG33	Q06485	197 aa		4.1	□□□□□ -1.75
GDB1	YPR184W	FLO5	P38894	1075 aa		4.1	□□□□□ -1.75
GDB1	YPR184W	OXA1	P39952	402 aa		4.1	□□□□□ -1.75
GDB1	YPR184W	CAX4	P53223	239 aa		4.1	□□□□□ -1.75
GDB1	YPR184W	YMR105W-A	Q8TGS8	64 aa		4.1	□□□□□ -1.75
GDB1	YPR184W	BRR2	P32639	2163 aa	Known RBP	4.1	□□□□□ -1.75
GDB1	YPR184W	CYC7	P00045	113 aa		4.1	□□□□□ -1.75
GDB1	YPR184W	VMA11	P32842	164 aa		4.1	□□□□□ -1.75
GDB1	YPR184W	PHS1	P40857	217 aa		4.1	□□□□□ -1.75
GDB1	YPR184W	SCM4	P32564	187 aa		4.1	□□□□□ -1.75
GDB1	YPR184W	MIC12	P38341	106 aa		4.1	□□□□□ -1.75
GDB1	YPR184W	COF1	Q03048	143 aa	Known RBP	4.1	□□□□□ -1.75
GDB1	YPR184W	YLR042C	Q07990	161 aa		4.1	□□□□□ -1.75
GDB1	YPR184W	TMA10	Q06177	86 aa		4.09	□□□□□ -1.75
GDB1	YPR184W	MRPL24	P36525	258 aa	Predicted RBP	4.09	□□□□□ -1.75
GDB1	YPR184W	YNL194C	P40169	301 aa		4.09	□□□□□ -1.75
GDB1	YPR184W	YIA6	P40556	373 aa		4.09	□□□□□ -1.75
GDB1	YPR184W	YGL088W	P53151	121 aa		4.09	□□□□□ -1.75
GDB1	YPR184W	TOM7	P53507	60 aa		4.09	□□□□□ -1.75
GDB1	YPR184W	AYT1	Q12226	474 aa		4.09	□□□□□ -1.75
GDB1	YPR184W	YCR001W	P25347	104 aa		4.09	□□□□□ -1.75
GDB1	YPR184W	ERG28	P40030	148 aa		4.09	□□□□□ -1.75
GDB1	YPR184W	YDR029W	Q12111	104 aa		4.09	□□□□□ -1.75
GDB1	YPR184W	RTC6	O14464	93 aa		4.09	□□□□□ -1.76
GDB1	YPR184W	YCR085W	P25650	117 aa		4.09	□□□□□ -1.76
GDB1	YPR184W	YIL012W	P40551	113 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms