RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W CDC43P18898 376 aa3.18□□□□□ -1.9
SSO1YPL232W ARO2P28777 376 aaKnown RBP3.18□□□□□ -1.9
SSO1YPL232W DUT1P33317 147 aa3.18□□□□□ -1.9
SSO1YPL232W YER076CP40049 302 aa3.18□□□□□ -1.9
SSO1YPL232W MRPL31P14063 131 aaPredicted RBP3.17□□□□□ -1.9
SSO1YPL232W TAL1P15019 335 aaKnown RBP3.17□□□□□ -1.9
SSO1YPL232W YKL069WP36088 180 aa3.17□□□□□ -1.9
SSO1YPL232W RIB5P38145 238 aa3.17□□□□□ -1.9
SSO1YPL232W YBR090CP38253 122 aa3.17□□□□□ -1.9
SSO1YPL232W CYB5P40312 120 aa3.17□□□□□ -1.9
SSO1YPL232W MOG1P47123 218 aa3.17□□□□□ -1.9
SSO1YPL232W PAU4P53427 120 aa3.17□□□□□ -1.9
SSO1YPL232W ADD37Q03233 198 aa3.17□□□□□ -1.9
SSO1YPL232W ANT1Q06497 328 aa3.17□□□□□ -1.9
SSO1YPL232W ECM12O13529 151 aa3.16□□□□□ -1.9
SSO1YPL232W RPL42AP0CX27 106 aaKnown RBP3.16□□□□□ -1.9
SSO1YPL232W RPL42BP0CX28 106 aaKnown RBP3.16□□□□□ -1.9
SSO1YPL232W FRS1P15624 595 aaKnown RBP3.16□□□□□ -1.9
SSO1YPL232W MRPS9P38120 278 aa3.16□□□□□ -1.9
SSO1YPL232W YHR140WP38842 239 aa3.16□□□□□ -1.9
SSO1YPL232W TAD2P47058 250 aa3.16□□□□□ -1.9
SSO1YPL232W OST3P48439 350 aa3.16□□□□□ -1.9
SSO1YPL232W SDS23P53172 527 aa3.16□□□□□ -1.9
SSO1YPL232W EOS1P53938 366 aa3.16□□□□□ -1.9
SSO1YPL232W SME1Q12330 94 aaPredicted RBP3.16□□□□□ -1.9
SSO1YPL232W CMC4Q3E7A9 73 aa3.16□□□□□ -1.9
SSO1YPL232W RPS22AP0C0W1 130 aaKnown RBP3.15□□□□□ -1.91
SSO1YPL232W SRB7P47822 140 aa3.15□□□□□ -1.91
SSO1YPL232W YGL149WP53116 101 aa3.15□□□□□ -1.91
SSO1YPL232W TVP18Q04767 167 aa3.15□□□□□ -1.91
SSO1YPL232W ENV10Q99382 181 aa3.15□□□□□ -1.91
SSO1YPL232W YLR415CO13578 112 aa3.14□□□□□ -1.91
SSO1YPL232W PAU1P0CE88 120 aa3.14□□□□□ -1.91
SSO1YPL232W PAU14P0CE89 120 aa3.14□□□□□ -1.91
SSO1YPL232W PAU6P0CE90 120 aa3.14□□□□□ -1.91
SSO1YPL232W PAU18P0CE91 120 aa3.14□□□□□ -1.91
SSO1YPL232W PAU8P0CE92 120 aa3.14□□□□□ -1.91
SSO1YPL232W PAU11P0CE93 120 aa3.14□□□□□ -1.91
SSO1YPL232W PAU13P38725 120 aa3.14□□□□□ -1.91
SSO1YPL232W GCV3P39726 170 aaPredicted RBP3.14□□□□□ -1.91
SSO1YPL232W SEC72P39742 193 aaKnown RBP3.14□□□□□ -1.91
SSO1YPL232W DCV1P43595 202 aa3.14□□□□□ -1.91
SSO1YPL232W PAU10Q03050 120 aa3.14□□□□□ -1.91
SSO1YPL232W GPI19Q04082 140 aa3.14□□□□□ -1.91
SSO1YPL232W PAU20Q08322 120 aa3.14□□□□□ -1.91
SSO1YPL232W PAU9Q3E770 120 aa3.14□□□□□ -1.91
SSO1YPL232W YGL088WP53151 121 aa3.13□□□□□ -1.91
SSO1YPL232W COX19Q3E731 98 aa3.13□□□□□ -1.91
SSO1YPL232W TMA7Q3E764 64 aaKnown RBP3.13□□□□□ -1.91
SSO1YPL232W YBR085C-AO43137 85 aa3.12□□□□□ -1.91
SSO1YPL232W RPL27AP0C2H6 136 aaKnown RBP3.12□□□□□ -1.91
SSO1YPL232W MSK1P32048 576 aa3.12□□□□□ -1.91
SSO1YPL232W SRP21P32342 167 aa3.12□□□□□ -1.91
SSO1YPL232W YBR209WP38311 105 aa3.12□□□□□ -1.91
SSO1YPL232W RPB11P38902 120 aa3.12□□□□□ -1.91
SSO1YPL232W SPC25P40014 221 aa3.12□□□□□ -1.91
SSO1YPL232W GLO1P50107 326 aa3.12□□□□□ -1.91
SSO1YPL232W ARC18Q05933 178 aaKnown RBP3.12□□□□□ -1.91
SSO1YPL232W YLR118CQ12354 227 aa3.12□□□□□ -1.91
SSO1YPL232W YGL041C-BQ3E750 60 aa3.12□□□□□ -1.91
SSO1YPL232W YMR175W-AQ3E766 64 aa3.12□□□□□ -1.91
SSO1YPL232W YLR156WP0CE96 114 aa3.11□□□□□ -1.91
SSO1YPL232W YLR159WP0CE97 114 aa3.11□□□□□ -1.91
SSO1YPL232W YLR161WP0CE98 114 aa3.11□□□□□ -1.91
SSO1YPL232W MAG1P22134 296 aaKnown RBP3.11□□□□□ -1.91
SSO1YPL232W YKL070WP36087 169 aa3.11□□□□□ -1.91
SSO1YPL232W YBR219CP38317 127 aa3.11□□□□□ -1.91
SSO1YPL232W YER085CP40058 173 aa3.11□□□□□ -1.91
SSO1YPL232W CSM4Q08955 156 aa3.11□□□□□ -1.91
SSO1YPL232W ZRT1P32804 376 aa3.1□□□□□ -1.91
SSO1YPL232W SRP14P38985 146 aa3.1□□□□□ -1.91
SSO1YPL232W VTC1P40046 129 aaRIP-Chip data3.1□□□□□ -1.91not detected
SSO1YPL232W YGL194C-AQ2V2P6 80 aa3.1□□□□□ -1.91
SSO1YPL232W YGR149WP48236 432 aa3.09□□□□□ -1.91
SSO1YPL232W THG1P53215 237 aaKnown RBP3.09□□□□□ -1.91
SSO1YPL232W GIM5Q04493 163 aa3.09□□□□□ -1.91
SSO1YPL232W YCL001W-BQ96VH2 84 aa3.09□□□□□ -1.91
SSO1YPL232W AIM29P36154 155 aa3.08□□□□□ -1.92
SSO1YPL232W SDH8P38345 138 aa3.08□□□□□ -1.92
SSO1YPL232W GTO3Q04806 366 aa3.08□□□□□ -1.92
SSO1YPL232W ADH2P00331 348 aaKnown RBP3.07□□□□□ -1.92
SSO1YPL232W UBC4P15731 148 aa3.07□□□□□ -1.92
SSO1YPL232W SAR1P20606 190 aaKnown RBP3.07□□□□□ -1.92
SSO1YPL232W QRI5P32344 111 aa3.07□□□□□ -1.92
SSO1YPL232W VMA7P39111 118 aa3.07□□□□□ -1.92
SSO1YPL232W YAR029WP39549 74 aa3.07□□□□□ -1.92
SSO1YPL232W YAL065CO13511 128 aa3.06□□□□□ -1.92
SSO1YPL232W TRP1P00912 224 aa3.06□□□□□ -1.92
SSO1YPL232W SHG1P38337 142 aa3.06□□□□□ -1.92
SSO1YPL232W PAU7P39545 55 aa3.06□□□□□ -1.92
SSO1YPL232W YEL008WP40001 126 aa3.06□□□□□ -1.92
SSO1YPL232W YIL024CP40543 189 aa3.06□□□□□ -1.92
SSO1YPL232W URM1P40554 99 aaPredicted RBP3.06□□□□□ -1.92
SSO1YPL232W CWP2P43497 92 aa3.06□□□□□ -1.92
SSO1YPL232W PAU5P43575 122 aa3.06□□□□□ -1.92
SSO1YPL232W YJR146WP47174 117 aa3.06□□□□□ -1.92
SSO1YPL232W YOR268CQ08734 132 aa3.06□□□□□ -1.92
SSO1YPL232W YKR032WP36127 104 aa3.05□□□□□ -1.92
SSO1YPL232W YKR070WP36151 352 aaKnown RBP3.05□□□□□ -1.92
SSO1YPL232W HIT1P46973 164 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms