RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W PRM3Q08931 133 aa2.78□□□□□ -1.96
MSD1YPL104W FSF1Q12029 327 aaKnown RBP2.78□□□□□ -1.96
MSD1YPL104W YPL162CQ12042 273 aa2.78□□□□□ -1.96
MSD1YPL104W GSP1P32835 219 aaKnown RBP2.78□□□□□ -1.97
MSD1YPL104W GSP2P32836 220 aaKnown RBP2.78□□□□□ -1.97
MSD1YPL104W YER134CP40081 178 aa2.78□□□□□ -1.97
MSD1YPL104W PRE5P40302 234 aaKnown RBP2.78□□□□□ -1.97
MSD1YPL104W CDC40P40968 455 aaPredicted RBP2.78□□□□□ -1.97
MSD1YPL104W YDL186WP48568 277 aa2.78□□□□□ -1.97
MSD1YPL104W ERV14P53173 138 aa2.78□□□□□ -1.97
MSD1YPL104W YGR025WP53216 100 aa2.78□□□□□ -1.97
MSD1YPL104W YIP3P53633 176 aa2.78□□□□□ -1.97
MSD1YPL104W BET5Q03630 159 aa2.78□□□□□ -1.97
MSD1YPL104W WIP1Q2V2P8 89 aa2.78□□□□□ -1.97
MSD1YPL104W RPL27AP0C2H6 136 aaKnown RBP2.77□□□□□ -1.97
MSD1YPL104W TEM1P38987 245 aa2.77□□□□□ -1.97
MSD1YPL104W FIP1P45976 327 aa2.77□□□□□ -1.97
MSD1YPL104W GPI19Q04082 140 aa2.77□□□□□ -1.97
MSD1YPL104W TIM22Q12328 207 aa2.77□□□□□ -1.97
MSD1YPL104W YKL102CP34249 101 aa2.76□□□□□ -1.97
MSD1YPL104W PAU16P35994 123 aa2.76□□□□□ -1.97
MSD1YPL104W YHR022CP38763 256 aa2.76□□□□□ -1.97
MSD1YPL104W PRM7Q12459 698 aa2.76□□□□□ -1.97
MSD1YPL104W YNL146C-AQ3E7Z1 64 aa2.76□□□□□ -1.97
MSD1YPL104W YOR011W-AQ3E807 68 aa2.76□□□□□ -1.97
MSD1YPL104W RPL42AP0CX27 106 aaKnown RBP2.76□□□□□ -1.97
MSD1YPL104W RPL42BP0CX28 106 aaKnown RBP2.76□□□□□ -1.97
MSD1YPL104W FUN14P18411 198 aa2.76□□□□□ -1.97
MSD1YPL104W SCM4P32564 187 aa2.76□□□□□ -1.97
MSD1YPL104W YHR140WP38842 239 aa2.76□□□□□ -1.97
MSD1YPL104W BRP1P53194 125 aa2.76□□□□□ -1.97
MSD1YPL104W DIA1P54005 336 aa2.76□□□□□ -1.97
MSD1YPL104W CNL1Q06333 122 aa2.76□□□□□ -1.97
MSD1YPL104W CCW12Q12127 133 aa2.76□□□□□ -1.97
MSD1YPL104W LSO2Q3E772 92 aaKnown RBP2.76□□□□□ -1.97
MSD1YPL104W MRPL44P19956 98 aa2.75□□□□□ -1.97
MSD1YPL104W TOA2P32774 122 aa2.75□□□□□ -1.97
MSD1YPL104W PRY2P36110 329 aa2.75□□□□□ -1.97
MSD1YPL104W YNL200CP40165 246 aaKnown RBP2.75□□□□□ -1.97
MSD1YPL104W SIM1P40472 476 aa2.75□□□□□ -1.97
MSD1YPL104W MRPL49P40858 161 aaPredicted RBP2.75□□□□□ -1.97
MSD1YPL104W YJL028WP47062 111 aa2.75□□□□□ -1.97
MSD1YPL104W YOR097CQ12274 175 aaPredicted RBP2.75□□□□□ -1.97
MSD1YPL104W TAR1Q8TGM6 124 aa2.75□□□□□ -1.97
MSD1YPL104W AGA1P32323 725 aa2.74□□□□□ -1.97
MSD1YPL104W UTR5P32630 166 aa2.74□□□□□ -1.97
MSD1YPL104W YKR032WP36127 104 aa2.74□□□□□ -1.97
MSD1YPL104W PET8P38921 284 aa2.74□□□□□ -1.97
MSD1YPL104W KEG1P43614 200 aa2.74□□□□□ -1.97
MSD1YPL104W YMR244WQ04018 355 aa2.74□□□□□ -1.97
MSD1YPL104W FYV7Q12247 151 aa2.74□□□□□ -1.97
MSD1YPL104W YOL085CQ99345 113 aa2.74□□□□□ -1.97
MSD1YPL104W VAR1P02381 398 aa2.74□□□□□ -1.97
MSD1YPL104W YER135CP40082 130 aa2.74□□□□□ -1.97
MSD1YPL104W MIC26P50087 233 aa2.74□□□□□ -1.97
MSD1YPL104W MRPS8Q03799 155 aa2.74□□□□□ -1.97
MSD1YPL104W MSA1Q08471 629 aa2.74□□□□□ -1.97
MSD1YPL104W TPT1Q12272 230 aaKnown RBP2.74□□□□□ -1.97
MSD1YPL104W CRC1Q12289 327 aa2.74□□□□□ -1.97
MSD1YPL104W NUM1Q00402 2748 aa2.74□□□□□ -1.97
MSD1YPL104W YHR212W-AP0CX91 67 aa2.73□□□□□ -1.97
MSD1YPL104W YFL068WP0CX99 160 aa2.73□□□□□ -1.97
MSD1YPL104W YLL066W-AP0CY00 160 aa2.73□□□□□ -1.97
MSD1YPL104W YLL067W-AP0CY01 160 aa2.73□□□□□ -1.97
MSD1YPL104W YER076CP40049 302 aa2.73□□□□□ -1.97
MSD1YPL104W ALG13P53178 202 aa2.73□□□□□ -1.97
MSD1YPL104W POP3P53833 195 aaPredicted RBP2.73□□□□□ -1.97
MSD1YPL104W TVP18Q04767 167 aa2.73□□□□□ -1.97
MSD1YPL104W DPP1Q05521 289 aa2.73□□□□□ -1.97
MSD1YPL104W YGR035W-AQ45U48 73 aa2.73□□□□□ -1.97
MSD1YPL104W YPR014CQ6B0W2 109 aa2.73□□□□□ -1.97
MSD1YPL104W HTL1Q9URQ5 78 aa2.73□□□□□ -1.97
MSD1YPL104W ATP5P09457 212 aa2.72□□□□□ -1.97
MSD1YPL104W YCR023CP25351 611 aa2.72□□□□□ -1.97
MSD1YPL104W MPC2P38857 129 aa2.72□□□□□ -1.97
MSD1YPL104W MIG3P39943 394 aa2.72□□□□□ -1.97
MSD1YPL104W YIL014C-AQ02598 104 aa2.72□□□□□ -1.97
MSD1YPL104W MGR2Q02889 113 aa2.72□□□□□ -1.97
MSD1YPL104W PKR1Q03880 122 aaKnown RBP2.72□□□□□ -1.97
MSD1YPL104W GRH1Q04410 372 aaKnown RBP2.72□□□□□ -1.97
MSD1YPL104W YLR050CQ12155 161 aaKnown RBP2.72□□□□□ -1.97
MSD1YPL104W YBR200W-AQ3E755 54 aa2.72□□□□□ -1.97
MSD1YPL104W SAL1D6W196 494 aa2.72□□□□□ -1.97
MSD1YPL104W PFY1P07274 126 aa2.72□□□□□ -1.97
MSD1YPL104W KTI12P34253 313 aaKnown RBP2.72□□□□□ -1.97
MSD1YPL104W YDR366CP87287 132 aa2.72□□□□□ -1.97
MSD1YPL104W NAT5Q08689 176 aa2.72□□□□□ -1.97
MSD1YPL104W Q0255P03881 472 aa2.71□□□□□ -1.98
MSD1YPL104W SEC11P15367 167 aa2.71□□□□□ -1.98
MSD1YPL104W RPL16BP26785 198 aaKnown RBP2.71□□□□□ -1.98
MSD1YPL104W FYV4P38783 130 aaPredicted RBP2.71□□□□□ -1.98
MSD1YPL104W HAC1P41546 238 aa2.71□□□□□ -1.98
MSD1YPL104W YFR035CP43608 114 aa2.71□□□□□ -1.98
MSD1YPL104W YGL230CP53074 147 aa2.71□□□□□ -1.98
MSD1YPL104W SAE3P89114 91 aa2.71□□□□□ -1.98
MSD1YPL104W YDR042CQ03205 200 aa2.71□□□□□ -1.98
MSD1YPL104W YDL157CQ12082 118 aa2.71□□□□□ -1.98
MSD1YPL104W YDL085C-AQ3E7B7 68 aaKnown RBP2.71□□□□□ -1.98
MSD1YPL104W RPL27BP0C2H7 136 aaKnown RBP2.7□□□□□ -1.98
MSD1YPL104W RPL2AP0CX45 254 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms