RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W ERV14P53173 138 aa-0.17□□□□□ -2.44
VAM3YOR106W YGL041C-BQ3E750 60 aa-0.17□□□□□ -2.44
VAM3YOR106W POL2P21951 2222 aaKnown RBP-0.17□□□□□ -2.44
VAM3YOR106W TY4B-HP0C2J7 1802 aa-0.17□□□□□ -2.44
VAM3YOR106W YAP3P38749 330 aa-0.18□□□□□ -2.44
VAM3YOR106W CYB5P40312 120 aa-0.19□□□□□ -2.44
VAM3YOR106W YIL014C-AQ02598 104 aa-0.19□□□□□ -2.44
VAM3YOR106W TLG1Q03322 224 aa-0.19□□□□□ -2.44
VAM3YOR106W SEC59P20048 519 aa-0.2□□□□□ -2.44
VAM3YOR106W HYM1P32464 399 aa-0.2□□□□□ -2.44
VAM3YOR106W RPA12P32529 125 aaKnown RBP-0.2□□□□□ -2.44
VAM3YOR106W YLR285C-AQ3E771 56 aa-0.2□□□□□ -2.44
VAM3YOR106W TRM732Q03496 1420 aa-0.21□□□□□ -2.44
VAM3YOR106W YBR072C-AQ3E794 53 aa-0.21□□□□□ -2.44
VAM3YOR106W YRF1-6P53819 1859 aa-0.21□□□□□ -2.44
VAM3YOR106W ARC19P33204 171 aaKnown RBP-0.22□□□□□ -2.44
VAM3YOR106W VPS55P47111 140 aa-0.22□□□□□ -2.44
VAM3YOR106W YKL044WP36092 106 aa-0.24□□□□□ -2.45
VAM3YOR106W MPC1P53157 130 aaKnown RBP-0.24□□□□□ -2.45
VAM3YOR106W CSN9Q03981 162 aa-0.24□□□□□ -2.45
VAM3YOR106W GIM4P40005 111 aaKnown RBP-0.25□□□□□ -2.45
VAM3YOR106W GPI19Q04082 140 aa-0.25□□□□□ -2.45
VAM3YOR106W ECM5Q03214 1411 aa-0.25□□□□□ -2.45
VAM3YOR106W MRPS12P53732 153 aa-0.26□□□□□ -2.45
VAM3YOR106W PAU12P53343 120 aa-0.27□□□□□ -2.45
VAM3YOR106W YNL190WP53872 204 aa-0.27□□□□□ -2.45
VAM3YOR106W YNL277W-AQ3E7Z0 62 aa-0.27□□□□□ -2.45
VAM3YOR106W YOR376W-AQ3E805 51 aa-0.27□□□□□ -2.45
VAM3YOR106W DNA2P38859 1522 aa-0.28□□□□□ -2.45
VAM3YOR106W YJL197C-AP0C5P0 93 aa-0.28□□□□□ -2.45
VAM3YOR106W SNF11P38956 169 aa-0.28□□□□□ -2.45
VAM3YOR106W COX23P38824 151 aa-0.3□□□□□ -2.46
VAM3YOR106W YHR130CP38834 111 aa-0.3□□□□□ -2.46
VAM3YOR106W CYC2P38909 366 aa-0.3□□□□□ -2.46
VAM3YOR106W GCV3P39726 170 aaPredicted RBP-0.3□□□□□ -2.46
VAM3YOR106W SAE3P89114 91 aa-0.3□□□□□ -2.46
VAM3YOR106W PCC1Q3E833 88 aa-0.3□□□□□ -2.46
VAM3YOR106W Q0144Q9ZZW2 109 aa-0.3□□□□□ -2.46
VAM3YOR106W HMRA2P0CY13 119 aa-0.31□□□□□ -2.46
VAM3YOR106W SFT1P43682 97 aa-0.31□□□□□ -2.46
VAM3YOR106W CNL1Q06333 122 aa-0.31□□□□□ -2.46
VAM3YOR106W SLO1Q3E784 85 aa-0.31□□□□□ -2.46
VAM3YOR106W YPK9Q12697 1472 aa-0.31□□□□□ -2.46
VAM3YOR106W GAT4P40569 121 aa-0.32□□□□□ -2.46
VAM3YOR106W FRQ1Q06389 190 aa-0.32□□□□□ -2.46
VAM3YOR106W YLR363W-AQ3E747 85 aa-0.32□□□□□ -2.46
VAM3YOR106W CCW14O13547 238 aa-0.33□□□□□ -2.46
VAM3YOR106W QCR6P00127 147 aa-0.33□□□□□ -2.46
VAM3YOR106W RPS20P38701 121 aaKnown RBP-0.33□□□□□ -2.46
VAM3YOR106W SPC24Q04477 213 aa-0.33□□□□□ -2.46
VAM3YOR106W OST5Q92316 86 aa-0.33□□□□□ -2.46
VAM3YOR106W ACP1P32463 125 aa-0.34□□□□□ -2.46
VAM3YOR106W RUB1Q03919 77 aa-0.34□□□□□ -2.46
VAM3YOR106W YPL261CQ08976 102 aa-0.34□□□□□ -2.46
VAM3YOR106W YLR255CO13574 117 aa-0.35□□□□□ -2.47
VAM3YOR106W TDA2P40045 126 aa-0.35□□□□□ -2.47
VAM3YOR106W TIM8P57744 87 aa-0.35□□□□□ -2.47
VAM3YOR106W SHU1P38751 150 aa-0.36□□□□□ -2.47
VAM3YOR106W RPL22BP56628 122 aaKnown RBP-0.36□□□□□ -2.47
VAM3YOR106W PAU24P38155 120 aa-0.37□□□□□ -2.47
VAM3YOR106W SNN1P48232 102 aa-0.37□□□□□ -2.47
VAM3YOR106W YGR042WP53227 271 aa-0.37□□□□□ -2.47
VAM3YOR106W ADK1P07170 222 aaKnown RBP-0.38□□□□□ -2.47
VAM3YOR106W POP7P38291 140 aa-0.38□□□□□ -2.47
VAM3YOR106W YIL086CP40503 102 aa-0.38□□□□□ -2.47
VAM3YOR106W PAU2P32612 120 aa-0.39□□□□□ -2.47
VAM3YOR106W ATX1P38636 73 aa-0.39□□□□□ -2.47
VAM3YOR106W YOR097CQ12274 175 aaPredicted RBP-0.39□□□□□ -2.47
VAM3YOR106W PAM16P42949 149 aa-0.4□□□□□ -2.47
VAM3YOR106W RIM15P43565 1770 aa-0.4□□□□□ -2.47
VAM3YOR106W RPO41P13433 1351 aaKnown RBP-0.41□□□□□ -2.47
VAM3YOR106W YER187WP40102 141 aa-0.41□□□□□ -2.48
VAM3YOR106W YDR278CQ05612 105 aa-0.41□□□□□ -2.48
VAM3YOR106W YLR361C-AQ3E795 98 aa-0.41□□□□□ -2.48
VAM3YOR106W RAD50P12753 1312 aa-0.41□□□□□ -2.48
VAM3YOR106W YIR020CP40575 100 aa-0.42□□□□□ -2.48
VAM3YOR106W NKP2Q06162 153 aa-0.42□□□□□ -2.48
VAM3YOR106W DAD1Q12248 94 aa-0.42□□□□□ -2.48
VAM3YOR106W MYO2P19524 1574 aaKnown RBP-0.43□□□□□ -2.48
VAM3YOR106W TOP2P06786 1428 aaKnown RBP-0.43□□□□□ -2.48
VAM3YOR106W MRP49P32388 137 aa-0.43□□□□□ -2.48
VAM3YOR106W LSM6Q06406 86 aaKnown RBP-0.43□□□□□ -2.48
VAM3YOR106W PAU19P0CE85 124 aa-0.44□□□□□ -2.48
VAM3YOR106W PAU3P25610 124 aa-0.44□□□□□ -2.48
VAM3YOR106W IMP2P46972 177 aa-0.44□□□□□ -2.48
VAM3YOR106W YCL048W-AQ2V2Q2 79 aa-0.44□□□□□ -2.48
VAM3YOR106W MPC2P38857 129 aa-0.45□□□□□ -2.48
VAM3YOR106W RPS11AP0CX47 156 aaKnown RBP-0.46□□□□□ -2.48
VAM3YOR106W RPS11BP0CX48 156 aaKnown RBP-0.46□□□□□ -2.48
VAM3YOR106W SGF11Q03067 99 aa-0.46□□□□□ -2.48
VAM3YOR106W RPB11P38902 120 aa-0.47□□□□□ -2.48
VAM3YOR106W YNL198CP40166 100 aa-0.47□□□□□ -2.48
VAM3YOR106W YOL118CQ08259 102 aa-0.47□□□□□ -2.48
VAM3YOR106W YGL204CP53089 101 aa-0.48□□□□□ -2.49
VAM3YOR106W DYN2Q02647 92 aa-0.48□□□□□ -2.49
VAM3YOR106W YFR009W-AP0C5M9 85 aa-0.49□□□□□ -2.49
VAM3YOR106W YLR099W-AQ3E798 87 aa-0.49□□□□□ -2.49
VAM3YOR106W YPL038W-AQ3E7B4 63 aa-0.49□□□□□ -2.49
VAM3YOR106W YCR099CP25657 155 aa-0.5□□□□□ -2.49
VAM3YOR106W YAR029WP39549 74 aa-0.5□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms