RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C LPP1Q04396 274 aa2□□□□□ -2.09
DNL4YOR005C FSF1Q12029 327 aaKnown RBP2□□□□□ -2.09
DNL4YOR005C HTL1Q9URQ5 78 aa2□□□□□ -2.09
DNL4YOR005C YKR070WP36151 352 aaKnown RBP1.99□□□□□ -2.09
DNL4YOR005C TEL1P38110 2787 aa1.99□□□□□ -2.09
DNL4YOR005C CAB4P53332 305 aa1.99□□□□□ -2.09
DNL4YOR005C UPS1Q05776 175 aa1.99□□□□□ -2.09
DNL4YOR005C YIL102C-AQ2V2P5 75 aa1.99□□□□□ -2.09
DNL4YOR005C YGL258W-AQ3E740 77 aa1.99□□□□□ -2.09
DNL4YOR005C BOL1Q3E793 110 aa1.99□□□□□ -2.09
DNL4YOR005C YDR034W-BQ6Q5X2 51 aa1.99□□□□□ -2.09
DNL4YOR005C Q0144Q9ZZW2 109 aa1.99□□□□□ -2.09
DNL4YOR005C SRX1P36077 127 aa1.99□□□□□ -2.09
DNL4YOR005C LSM2P38203 95 aaKnown RBP1.99□□□□□ -2.09
DNL4YOR005C YHR173CP38864 112 aa1.99□□□□□ -2.09
DNL4YOR005C YPI1P43587 155 aa1.99□□□□□ -2.09
DNL4YOR005C YGL260WP53056 76 aa1.99□□□□□ -2.09
DNL4YOR005C ATO3Q12359 275 aa1.99□□□□□ -2.09
DNL4YOR005C COX10P21592 462 aa1.99□□□□□ -2.09
DNL4YOR005C HSP12P22943 109 aaKnown RBP1.99□□□□□ -2.09
DNL4YOR005C HSP150P32478 413 aa1.99□□□□□ -2.09
DNL4YOR005C PAM17P36147 197 aa1.99□□□□□ -2.09
DNL4YOR005C MED6P38782 295 aa1.99□□□□□ -2.09
DNL4YOR005C YJR015WP47090 510 aa1.99□□□□□ -2.09
DNL4YOR005C TDA4P47153 279 aa1.99□□□□□ -2.09
DNL4YOR005C YDR102CQ03864 110 aa1.99□□□□□ -2.09
DNL4YOR005C YOL160WQ08321 113 aa1.99□□□□□ -2.09
DNL4YOR005C FIT3Q08907 204 aa1.99□□□□□ -2.09
DNL4YOR005C YKL023C-AQ2V2P3 75 aa1.99□□□□□ -2.09
DNL4YOR005C CUP2P15315 225 aa1.98□□□□□ -2.09
DNL4YOR005C TOM40P23644 387 aaKnown RBP1.98□□□□□ -2.09
DNL4YOR005C ROX3P25046 220 aa1.98□□□□□ -2.09
DNL4YOR005C RPS27AP35997 82 aaKnown RBP1.98□□□□□ -2.09
DNL4YOR005C YKL044WP36092 106 aa1.98□□□□□ -2.09
DNL4YOR005C RPS27BP38711 82 aa1.98□□□□□ -2.09
DNL4YOR005C DOG2P38773 246 aa1.98□□□□□ -2.09
DNL4YOR005C YAR068WP39564 161 aa1.98□□□□□ -2.09
DNL4YOR005C YIL163CP40448 117 aa1.98□□□□□ -2.09
DNL4YOR005C DSK2P48510 373 aa1.98□□□□□ -2.09
DNL4YOR005C SBH2P52871 88 aa1.98□□□□□ -2.09
DNL4YOR005C BRP1P53194 125 aa1.98□□□□□ -2.09
DNL4YOR005C VPS71Q03433 280 aa1.98□□□□□ -2.09
DNL4YOR005C SCW10Q04951 389 aa1.98□□□□□ -2.09
DNL4YOR005C YLR296WQ05898 108 aa1.98□□□□□ -2.09
DNL4YOR005C GEP5Q12393 293 aa1.98□□□□□ -2.09
DNL4YOR005C GCN1P33892 2672 aaKnown RBP1.98□□□□□ -2.09
DNL4YOR005C RPS28BP0C0X0 67 aaKnown RBP1.98□□□□□ -2.09
DNL4YOR005C HYP2P23301 157 aaKnown RBP1.98□□□□□ -2.09
DNL4YOR005C YBR220CP38318 560 aa1.98□□□□□ -2.09
DNL4YOR005C PAU7P39545 55 aa1.98□□□□□ -2.09
DNL4YOR005C YNL198CP40166 100 aa1.98□□□□□ -2.09
DNL4YOR005C CAX4P53223 239 aa1.98□□□□□ -2.09
DNL4YOR005C ELC1Q03071 99 aa1.98□□□□□ -2.09
DNL4YOR005C MPD1Q12404 318 aaKnown RBP1.98□□□□□ -2.09
DNL4YOR005C RPS28AQ3E7X9 67 aaPredicted RBP1.98□□□□□ -2.09
DNL4YOR005C YHR214C-DP0CX93 97 aa1.97□□□□□ -2.09
DNL4YOR005C POP3P53833 195 aaPredicted RBP1.97□□□□□ -2.09
DNL4YOR005C YDR391CQ04170 232 aa1.97□□□□□ -2.09
DNL4YOR005C POC4Q12245 148 aaPredicted RBP1.97□□□□□ -2.09
DNL4YOR005C NOP1P15646 327 aaKnown RBP1.97□□□□□ -2.09
DNL4YOR005C PCL1P24867 279 aa1.97□□□□□ -2.09
DNL4YOR005C MSA2P36157 363 aa1.97□□□□□ -2.09
DNL4YOR005C SNU13P39990 126 aaKnown RBP1.97□□□□□ -2.09
DNL4YOR005C YIL086CP40503 102 aa1.97□□□□□ -2.09
DNL4YOR005C HST4P53688 370 aa1.97□□□□□ -2.09
DNL4YOR005C YDL180WQ12301 547 aa1.97□□□□□ -2.09
DNL4YOR005C WIP1Q2V2P8 89 aa1.97□□□□□ -2.09
DNL4YOR005C YOR192C-CQ3E736 78 aa1.97□□□□□ -2.09
DNL4YOR005C ADH1P00330 348 aaKnown RBP1.96□□□□□ -2.1
DNL4YOR005C HSK3P69852 69 aa1.96□□□□□ -2.1
DNL4YOR005C DYN2Q02647 92 aa1.96□□□□□ -2.1
DNL4YOR005C YOL118CQ08259 102 aa1.96□□□□□ -2.1
DNL4YOR005C YOR020W-AQ3E824 90 aa1.96□□□□□ -2.1
DNL4YOR005C ISD11Q6Q560 94 aa1.96□□□□□ -2.1
DNL4YOR005C MRPL31P14063 131 aaPredicted RBP1.96□□□□□ -2.1
DNL4YOR005C YNL200CP40165 246 aaKnown RBP1.96□□□□□ -2.1
DNL4YOR005C FIT2Q08906 153 aa1.96□□□□□ -2.1
DNL4YOR005C TDA8Q6B2U8 126 aa1.96□□□□□ -2.1
DNL4YOR005C YOR304C-AO14468 76 aa1.95□□□□□ -2.1
DNL4YOR005C YCR023CP25351 611 aa1.95□□□□□ -2.1
DNL4YOR005C TIF34P40217 347 aaKnown RBP1.95□□□□□ -2.1
DNL4YOR005C YDR042CQ03205 200 aa1.95□□□□□ -2.1
DNL4YOR005C PRM3Q08931 133 aa1.95□□□□□ -2.1
DNL4YOR005C SCS22Q6Q595 175 aa1.95□□□□□ -2.1
DNL4YOR005C YOR032W-AQ8TGS1 66 aa1.95□□□□□ -2.1
DNL4YOR005C YBR090CP38253 122 aa1.95□□□□□ -2.1
DNL4YOR005C ATX1P38636 73 aa1.95□□□□□ -2.1
DNL4YOR005C SMD1Q02260 146 aaPredicted RBP1.95□□□□□ -2.1
DNL4YOR005C YFR045WP43617 309 aa1.95□□□□□ -2.1
DNL4YOR005C AIM34Q03673 198 aa1.95□□□□□ -2.1
DNL4YOR005C RAV2Q03956 351 aa1.95□□□□□ -2.1
DNL4YOR005C SDH7Q04401 133 aa1.95□□□□□ -2.1
DNL4YOR005C SHH4Q06236 168 aa1.95□□□□□ -2.1
DNL4YOR005C PRP8P33334 2413 aaKnown RBP1.94□□□□□ -2.1
DNL4YOR005C CSH1P38287 376 aa1.94□□□□□ -2.1
DNL4YOR005C GLE2P40066 365 aa1.94□□□□□ -2.1
DNL4YOR005C YER181CP40097 107 aa1.94□□□□□ -2.1
DNL4YOR005C YPL073CP40323 161 aa1.94□□□□□ -2.1
DNL4YOR005C MIX17Q03667 156 aa1.94□□□□□ -2.1
DNL4YOR005C INO4P13902 151 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms