RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C RBL2P48606 106 aaKnown RBP0.5□□□□□ -2.33
RKR1YMR247C ATG41Q12048 136 aa0.5□□□□□ -2.33
RKR1YMR247C YDL157CQ12082 118 aa0.5□□□□□ -2.33
RKR1YMR247C ACC1Q00955 2233 aaKnown RBP0.5□□□□□ -2.33
RKR1YMR247C YHR213WP0CI67 198 aa0.5□□□□□ -2.33
RKR1YMR247C ETR1P38071 380 aa0.5□□□□□ -2.33
RKR1YMR247C RRT1P38192 103 aa0.5□□□□□ -2.33
RKR1YMR247C YHL018WP38744 120 aaPredicted RBP0.5□□□□□ -2.33
RKR1YMR247C IPI1P38803 334 aaPredicted RBP0.5□□□□□ -2.33
RKR1YMR247C GPI14P47088 403 aaKnown RBP0.5□□□□□ -2.33
RKR1YMR247C VPS55P47111 140 aa0.5□□□□□ -2.33
RKR1YMR247C YGR039WP53225 103 aa0.5□□□□□ -2.33
RKR1YMR247C YDR274CP87283 123 aa0.5□□□□□ -2.33
RKR1YMR247C YDR366CP87287 132 aa0.5□□□□□ -2.33
RKR1YMR247C PIR1Q03178 341 aa0.5□□□□□ -2.33
RKR1YMR247C RUB1Q03919 77 aa0.5□□□□□ -2.33
RKR1YMR247C YPR114WQ06107 315 aa0.5□□□□□ -2.33
RKR1YMR247C FRQ1Q06389 190 aa0.5□□□□□ -2.33
RKR1YMR247C YDR157WA0A023PZE8 133 aa0.49□□□□□ -2.33
RKR1YMR247C RPS22AP0C0W1 130 aaKnown RBP0.49□□□□□ -2.33
RKR1YMR247C AME1P38313 324 aa0.49□□□□□ -2.33
RKR1YMR247C ERV14P53173 138 aa0.49□□□□□ -2.33
RKR1YMR247C EST3Q03096 181 aa0.49□□□□□ -2.33
RKR1YMR247C LIP1Q03579 150 aa0.49□□□□□ -2.33
RKR1YMR247C RAV2Q03956 351 aa0.49□□□□□ -2.33
RKR1YMR247C GIM5Q04493 163 aa0.49□□□□□ -2.33
RKR1YMR247C FCF2Q12035 217 aaPredicted RBP0.49□□□□□ -2.33
RKR1YMR247C RPS22BQ3E7Y3 130 aaKnown RBP0.49□□□□□ -2.33
RKR1YMR247C Q0144Q9ZZW2 109 aa0.49□□□□□ -2.33
RKR1YMR247C COX8P04039 78 aa0.49□□□□□ -2.33
RKR1YMR247C HTD2P38790 280 aaKnown RBP0.49□□□□□ -2.33
RKR1YMR247C MPM1P40364 252 aa0.49□□□□□ -2.33
RKR1YMR247C COX12Q01519 83 aa0.49□□□□□ -2.33
RKR1YMR247C YLR118CQ12354 227 aa0.49□□□□□ -2.33
RKR1YMR247C GTT2Q12390 233 aa0.49□□□□□ -2.33
RKR1YMR247C YLR361C-AQ3E795 98 aa0.49□□□□□ -2.33
RKR1YMR247C YFL019CP43576 117 aa0.49□□□□□ -2.33
RKR1YMR247C YNR064CP53750 290 aa0.49□□□□□ -2.33
RKR1YMR247C FIT1Q04433 528 aa0.49□□□□□ -2.33
RKR1YMR247C SEN15Q04675 128 aa0.49□□□□□ -2.33
RKR1YMR247C RDI1Q12434 202 aa0.49□□□□□ -2.33
RKR1YMR247C HUT1Q12520 339 aa0.49□□□□□ -2.33
RKR1YMR247C YML100W-AQ8TGT0 57 aa0.49□□□□□ -2.33
RKR1YMR247C MRPL24P36525 258 aaPredicted RBP0.49□□□□□ -2.33
RKR1YMR247C HSP10P38910 106 aa0.49□□□□□ -2.33
RKR1YMR247C MPC3P53311 146 aa0.49□□□□□ -2.33
RKR1YMR247C YDR102CQ03864 110 aa0.49□□□□□ -2.33
RKR1YMR247C YDR246W-AQ3E763 66 aa0.49□□□□□ -2.33
RKR1YMR247C MDN1Q12019 4910 aaKnown RBP0.48□□□□□ -2.33
RKR1YMR247C YGL041W-AP0C5N3 154 aa0.48□□□□□ -2.33
RKR1YMR247C SRP21P32342 167 aa0.48□□□□□ -2.33
RKR1YMR247C PAM17P36147 197 aa0.48□□□□□ -2.33
RKR1YMR247C YHL005CP38752 130 aa0.48□□□□□ -2.33
RKR1YMR247C YPL073CP40323 161 aa0.48□□□□□ -2.33
RKR1YMR247C LSM3P57743 89 aaKnown RBP0.48□□□□□ -2.33
RKR1YMR247C YOL014WQ08110 124 aa0.48□□□□□ -2.33
RKR1YMR247C YOR385WQ08909 290 aa0.48□□□□□ -2.33
RKR1YMR247C COX5BP00425 151 aa0.48□□□□□ -2.33
RKR1YMR247C ATP5P09457 212 aa0.48□□□□□ -2.33
RKR1YMR247C YKR041WP36134 250 aa0.48□□□□□ -2.33
RKR1YMR247C YER181CP40097 107 aa0.48□□□□□ -2.33
RKR1YMR247C YGL149WP53116 101 aa0.48□□□□□ -2.33
RKR1YMR247C YGL101WP53144 215 aa0.48□□□□□ -2.33
RKR1YMR247C NHP10Q03435 203 aa0.48□□□□□ -2.33
RKR1YMR247C SDH7Q04401 133 aa0.48□□□□□ -2.33
RKR1YMR247C YPR202WQ08993 238 aa0.48□□□□□ -2.33
RKR1YMR247C HFA1P32874 2273 aa0.48□□□□□ -2.33
RKR1YMR247C RPL36BO14455 100 aaKnown RBP0.47□□□□□ -2.33
RKR1YMR247C RPL36AP05745 100 aaPredicted RBP0.47□□□□□ -2.33
RKR1YMR247C FYV4P38783 130 aaPredicted RBP0.47□□□□□ -2.33
RKR1YMR247C EAF6P47128 113 aa0.47□□□□□ -2.33
RKR1YMR247C DIG2Q03373 323 aaKnown RBP0.47□□□□□ -2.33
RKR1YMR247C RIM9Q04734 239 aa0.47□□□□□ -2.33
RKR1YMR247C TAR1Q8TGM6 124 aa0.47□□□□□ -2.33
RKR1YMR247C YER039C-AP0CD97 72 aa0.47□□□□□ -2.33
RKR1YMR247C SPT14P32363 452 aa0.47□□□□□ -2.33
RKR1YMR247C SRX1P36077 127 aa0.47□□□□□ -2.33
RKR1YMR247C YNL019CP53975 284 aa0.47□□□□□ -2.33
RKR1YMR247C HPA2Q06592 156 aa0.47□□□□□ -2.33
RKR1YMR247C ANB1P19211 157 aa0.47□□□□□ -2.33
RKR1YMR247C HSP12P22943 109 aaKnown RBP0.47□□□□□ -2.33
RKR1YMR247C EMC4P53073 190 aa0.47□□□□□ -2.33
RKR1YMR247C THI74Q04083 370 aa0.47□□□□□ -2.33
RKR1YMR247C NKP2Q06162 153 aa0.47□□□□□ -2.33
RKR1YMR247C IRC19Q07843 230 aa0.47□□□□□ -2.33
RKR1YMR247C PFY1P07274 126 aa0.47□□□□□ -2.33
RKR1YMR247C RPL35AP0CX84 120 aaKnown RBP0.47□□□□□ -2.33
RKR1YMR247C RPL35BP0CX85 120 aaKnown RBP0.47□□□□□ -2.33
RKR1YMR247C YCR001WP25347 104 aa0.47□□□□□ -2.33
RKR1YMR247C SFT2P38166 215 aa0.47□□□□□ -2.33
RKR1YMR247C YNR077CP53758 84 aa0.47□□□□□ -2.33
RKR1YMR247C SPC24Q04477 213 aa0.47□□□□□ -2.33
RKR1YMR247C GPI11Q06636 219 aa0.47□□□□□ -2.33
RKR1YMR247C YER121WP40076 114 aa0.46□□□□□ -2.34
RKR1YMR247C FIP1P45976 327 aa0.46□□□□□ -2.34
RKR1YMR247C DIE2P50076 525 aa0.46□□□□□ -2.34
RKR1YMR247C RAF1Q06891 181 aa0.46□□□□□ -2.34
RKR1YMR247C POR2P40478 281 aa0.46□□□□□ -2.34
RKR1YMR247C YCL001W-AP87012 153 aa0.46□□□□□ -2.34
RKR1YMR247C YMR099CQ03161 297 aaKnown RBP0.46□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 104.5 ms