RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPG4	YMR107W	RPS14A	P06367	137 aa	Known RBP	4.22	□□□□□ -1.73
SPG4	YMR107W	RPS8A	P0CX39	200 aa	Known RBP	4.22	□□□□□ -1.73
SPG4	YMR107W	RPS8B	P0CX40	200 aa	Known RBP	4.22	□□□□□ -1.73
SPG4	YMR107W	RPS14B	P39516	138 aa	Known RBP	4.22	□□□□□ -1.73
SPG4	YMR107W	OXA1	P39952	402 aa		4.22	□□□□□ -1.73
SPG4	YMR107W	NCA3	P46955	337 aa		4.22	□□□□□ -1.73
SPG4	YMR107W	GON7	P46984	123 aa		4.22	□□□□□ -1.73
SPG4	YMR107W	SDH7	Q04401	133 aa		4.22	□□□□□ -1.73
SPG4	YMR107W	RRG8	Q06109	277 aa		4.22	□□□□□ -1.73
SPG4	YMR107W	HPA2	Q06592	156 aa		4.22	□□□□□ -1.73
SPG4	YMR107W	TIM22	Q12328	207 aa		4.22	□□□□□ -1.73
SPG4	YMR107W	PFY1	P07274	126 aa		4.21	□□□□□ -1.74
SPG4	YMR107W	YER039C-A	P0CD97	72 aa		4.21	□□□□□ -1.74
SPG4	YMR107W	MRPL20	P22354	195 aa	Predicted RBP	4.21	□□□□□ -1.74
SPG4	YMR107W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SPG4	YMR107W	VPS55	P47111	140 aa		4.21	□□□□□ -1.74
SPG4	YMR107W	SWS2	P53937	143 aa		4.21	□□□□□ -1.74
SPG4	YMR107W	LSM6	Q06406	86 aa	Known RBP	4.21	□□□□□ -1.74
SPG4	YMR107W	POL2	P21951	2222 aa	Known RBP	4.2	□□□□□ -1.74
SPG4	YMR107W	SPI1	P40092	148 aa		4.2	□□□□□ -1.74
SPG4	YMR107W	YDL186W	P48568	277 aa		4.2	□□□□□ -1.74
SPG4	YMR107W	SBH2	P52871	88 aa		4.2	□□□□□ -1.74
SPG4	YMR107W	MRPS12	P53732	153 aa		4.2	□□□□□ -1.74
SPG4	YMR107W	DAD4	P69851	72 aa		4.2	□□□□□ -1.74
SPG4	YMR107W	RRS1	Q08746	203 aa	Known RBP	4.2	□□□□□ -1.74
SPG4	YMR107W	CSF1	Q12150	2958 aa		4.2	□□□□□ -1.74
SPG4	YMR107W	YCL021W-A	Q96VH3	125 aa		4.2	□□□□□ -1.74
SPG4	YMR107W	YLR415C	O13578	112 aa		4.19	□□□□□ -1.74
SPG4	YMR107W	UBC5	P15732	148 aa		4.19	□□□□□ -1.74
SPG4	YMR107W	YCR085W	P25650	117 aa		4.19	□□□□□ -1.74
SPG4	YMR107W	YKL097C	P34245	136 aa		4.19	□□□□□ -1.74
SPG4	YMR107W	YER121W	P40076	114 aa		4.19	□□□□□ -1.74
SPG4	YMR107W	TOS6	P48560	102 aa		4.19	□□□□□ -1.74
SPG4	YMR107W	DUO1	P53168	247 aa	Known RBP	4.19	□□□□□ -1.74
SPG4	YMR107W	CAX4	P53223	239 aa		4.19	□□□□□ -1.74
SPG4	YMR107W	GPI19	Q04082	140 aa		4.19	□□□□□ -1.74
SPG4	YMR107W	YTH1	Q06102	208 aa	Predicted RBP	4.19	□□□□□ -1.74
SPG4	YMR107W	YOR029W	Q12243	111 aa		4.19	□□□□□ -1.74
SPG4	YMR107W	YDR381C-A	Q3E6R5	114 aa		4.19	□□□□□ -1.74
SPG4	YMR107W	ENV10	Q99382	181 aa		4.19	□□□□□ -1.74
SPG4	YMR107W	RPL27A	P0C2H6	136 aa	Known RBP	4.18	□□□□□ -1.74
SPG4	YMR107W	MRPL24	P36525	258 aa	Predicted RBP	4.18	□□□□□ -1.74
SPG4	YMR107W	TIF34	P40217	347 aa	Known RBP	4.18	□□□□□ -1.74
SPG4	YMR107W	REE1	P40893	198 aa		4.18	□□□□□ -1.74
SPG4	YMR107W	FIP1	P45976	327 aa		4.18	□□□□□ -1.74
SPG4	YMR107W	YPL261C	Q08976	102 aa		4.18	□□□□□ -1.74
SPG4	YMR107W	IGO2	Q9P305	131 aa		4.18	□□□□□ -1.74
SPG4	YMR107W	IRA2	P19158	3079 aa		4.18	□□□□□ -1.74
SPG4	YMR107W	BEM2	P39960	2167 aa	Known RBP	4.17	□□□□□ -1.74
SPG4	YMR107W	TRA1	P38811	3744 aa		4.17	□□□□□ -1.74
SPG4	YMR107W	YHR214C-D	P0CX93	97 aa		4.17	□□□□□ -1.74
SPG4	YMR107W	IMG2	P25642	146 aa	Predicted RBP	4.17	□□□□□ -1.74
SPG4	YMR107W	PCL2	P25693	308 aa		4.17	□□□□□ -1.74
SPG4	YMR107W	VMA11	P32842	164 aa		4.17	□□□□□ -1.74
SPG4	YMR107W	NRG2	P38082	220 aa		4.17	□□□□□ -1.74
SPG4	YMR107W	YHR140W	P38842	239 aa		4.17	□□□□□ -1.74
SPG4	YMR107W	YJL027C	P47063	138 aa	Predicted RBP	4.17	□□□□□ -1.74
SPG4	YMR107W	YDR114C	Q04597	100 aa		4.17	□□□□□ -1.74
SPG4	YMR107W	FAB1	P34756	2278 aa		4.17	□□□□□ -1.74
SPG4	YMR107W	YER084W	P40057	128 aa		4.16	□□□□□ -1.74
SPG4	YMR107W	YNL217W	P40152	326 aa		4.16	□□□□□ -1.74
SPG4	YMR107W	MRPL49	P40858	161 aa	Predicted RBP	4.16	□□□□□ -1.74
SPG4	YMR107W	CWP2	P43497	92 aa		4.16	□□□□□ -1.74
SPG4	YMR107W	MRPL19	P53875	158 aa		4.16	□□□□□ -1.74
SPG4	YMR107W	SDC1	Q03323	175 aa		4.16	□□□□□ -1.74
SPG4	YMR107W	IRC23	Q08416	157 aa		4.16	□□□□□ -1.74
SPG4	YMR107W	YLR342W-A	Q3E810	57 aa		4.16	□□□□□ -1.74
SPG4	YMR107W	YBL071C	P38185	102 aa		4.15	□□□□□ -1.75
SPG4	YMR107W	MBB1	P39534	108 aa		4.15	□□□□□ -1.75
SPG4	YMR107W	YIA6	P40556	373 aa		4.15	□□□□□ -1.75
SPG4	YMR107W	YFL051C	P43552	160 aa		4.15	□□□□□ -1.75
SPG4	YMR107W	SKI6	P46948	246 aa	Predicted RBP	4.15	□□□□□ -1.75
SPG4	YMR107W	MST27	P53176	234 aa		4.15	□□□□□ -1.75
SPG4	YMR107W	LIP2	Q06005	328 aa		4.15	□□□□□ -1.75
SPG4	YMR107W	RXT3	Q07458	294 aa		4.15	□□□□□ -1.75
SPG4	YMR107W	PRM7	Q12459	698 aa		4.15	□□□□□ -1.75
SPG4	YMR107W	YMR105W-A	Q8TGS8	64 aa		4.15	□□□□□ -1.75
SPG4	YMR107W	RPS28B	P0C0X0	67 aa	Known RBP	4.14	□□□□□ -1.75
SPG4	YMR107W	HMRA2	P0CY13	119 aa		4.14	□□□□□ -1.75
SPG4	YMR107W	SMP1	P38128	452 aa		4.14	□□□□□ -1.75
SPG4	YMR107W	YGR039W	P53225	103 aa		4.14	□□□□□ -1.75
SPG4	YMR107W	RPL15B	P54780	204 aa	Predicted RBP	4.14	□□□□□ -1.75
SPG4	YMR107W	UBC7	Q02159	165 aa		4.14	□□□□□ -1.75
SPG4	YMR107W	DAD1	Q12248	94 aa		4.14	□□□□□ -1.75
SPG4	YMR107W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.14	□□□□□ -1.75
SPG4	YMR107W	YHR139C-A	O13536	103 aa		4.13	□□□□□ -1.75
SPG4	YMR107W	YER085C	P40058	173 aa		4.13	□□□□□ -1.75
SPG4	YMR107W	LCB3	P47013	409 aa		4.13	□□□□□ -1.75
SPG4	YMR107W	ATP23	P53722	227 aa		4.13	□□□□□ -1.75
SPG4	YMR107W	AIM11	P87275	137 aa		4.13	□□□□□ -1.75
SPG4	YMR107W	GAT3	Q07928	141 aa		4.13	□□□□□ -1.75
SPG4	YMR107W	YOR376W	Q08900	122 aa		4.13	□□□□□ -1.75
SPG4	YMR107W	TIR2	P33890	251 aa		4.12	□□□□□ -1.75
SPG4	YMR107W	RPL32	P38061	130 aa	Known RBP	4.12	□□□□□ -1.75
SPG4	YMR107W	DSE2	P38844	325 aa		4.12	□□□□□ -1.75
SPG4	YMR107W	UBC11	P52492	156 aa		4.12	□□□□□ -1.75
SPG4	YMR107W	YIP1	P53039	248 aa		4.12	□□□□□ -1.75
SPG4	YMR107W	YPL038W-A	Q3E7B4	63 aa		4.12	□□□□□ -1.75
SPG4	YMR107W	PIR5	P46999	287 aa		4.11	□□□□□ -1.75
SPG4	YMR107W	BNA1	P47096	177 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms