RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W THI74Q04083 370 aa1.18□□□□□ -2.22
CSI1YMR025W VAM10Q08474 114 aa1.18□□□□□ -2.22
CSI1YMR025W YPR013CQ12145 317 aa1.18□□□□□ -2.22
CSI1YMR025W RPL13AQ12690 199 aaPredicted RBP1.18□□□□□ -2.22
CSI1YMR025W TSC3Q3E790 80 aa1.18□□□□□ -2.22
CSI1YMR025W TAR1Q8TGM6 124 aa1.18□□□□□ -2.22
CSI1YMR025W URA5P13298 226 aaKnown RBP1.17□□□□□ -2.22
CSI1YMR025W FZF1P32805 299 aa1.17□□□□□ -2.22
CSI1YMR025W UPS2P35200 230 aa1.17□□□□□ -2.22
CSI1YMR025W PAN3P36102 679 aaPredicted RBP1.17□□□□□ -2.22
CSI1YMR025W YBL071CP38185 102 aa1.17□□□□□ -2.22
CSI1YMR025W YNL217WP40152 326 aa1.17□□□□□ -2.22
CSI1YMR025W SER2P42941 309 aa1.17□□□□□ -2.22
CSI1YMR025W UBC7Q02159 165 aa1.17□□□□□ -2.22
CSI1YMR025W DYN2Q02647 92 aa1.17□□□□□ -2.22
CSI1YMR025W SDH7Q04401 133 aa1.17□□□□□ -2.22
CSI1YMR025W YNL146C-AQ3E7Z1 64 aa1.17□□□□□ -2.22
CSI1YMR025W YOR011W-AQ3E807 68 aa1.17□□□□□ -2.22
CSI1YMR025W YHR213WP0CI67 198 aa1.16□□□□□ -2.22
CSI1YMR025W BET1P22804 142 aa1.16□□□□□ -2.22
CSI1YMR025W MRP17P28778 131 aa1.16□□□□□ -2.22
CSI1YMR025W IPI1P38803 334 aaPredicted RBP1.16□□□□□ -2.22
CSI1YMR025W SNU13P39990 126 aaKnown RBP1.16□□□□□ -2.22
CSI1YMR025W YER135CP40082 130 aa1.16□□□□□ -2.22
CSI1YMR025W YIP3P53633 176 aa1.16□□□□□ -2.22
CSI1YMR025W VPS28Q02767 242 aa1.16□□□□□ -2.22
CSI1YMR025W RDI1Q12434 202 aa1.16□□□□□ -2.22
CSI1YMR025W RPL2AP0CX45 254 aaKnown RBP1.15□□□□□ -2.23
CSI1YMR025W RPL2BP0CX46 254 aaKnown RBP1.15□□□□□ -2.23
CSI1YMR025W RPS11AP0CX47 156 aaKnown RBP1.15□□□□□ -2.23
CSI1YMR025W RPS11BP0CX48 156 aaKnown RBP1.15□□□□□ -2.23
CSI1YMR025W RPB3P16370 318 aaKnown RBP1.15□□□□□ -2.23
CSI1YMR025W ATP15P21306 62 aa1.15□□□□□ -2.23
CSI1YMR025W MAG1P22134 296 aaKnown RBP1.15□□□□□ -2.23
CSI1YMR025W UTP11P34247 250 aaPredicted RBP1.15□□□□□ -2.23
CSI1YMR025W GLE2P40066 365 aa1.15□□□□□ -2.23
CSI1YMR025W CGR1P53188 120 aa1.15□□□□□ -2.23
CSI1YMR025W SNO1Q03144 224 aa1.15□□□□□ -2.23
CSI1YMR025W YMR090WQ04304 227 aaKnown RBP1.15□□□□□ -2.23
CSI1YMR025W FRQ1Q06389 190 aa1.15□□□□□ -2.23
CSI1YMR025W YPR145C-AQ2V2P0 78 aa1.15□□□□□ -2.23
CSI1YMR025W YCR075W-AQ3E830 75 aa1.15□□□□□ -2.23
CSI1YMR025W SPS2P08459 502 aa1.14□□□□□ -2.23
CSI1YMR025W RPS25BP0C0T4 108 aaKnown RBP1.14□□□□□ -2.23
CSI1YMR025W YCR001WP25347 104 aa1.14□□□□□ -2.23
CSI1YMR025W SPT14P32363 452 aa1.14□□□□□ -2.23
CSI1YMR025W ACP1P32463 125 aa1.14□□□□□ -2.23
CSI1YMR025W EMP24P32803 203 aaKnown RBP1.14□□□□□ -2.23
CSI1YMR025W SFT2P38166 215 aa1.14□□□□□ -2.23
CSI1YMR025W SLM6P38343 150 aa1.14□□□□□ -2.23
CSI1YMR025W YNL200CP40165 246 aaKnown RBP1.14□□□□□ -2.23
CSI1YMR025W SWM2P40342 146 aa1.14□□□□□ -2.23
CSI1YMR025W SPC1P46965 94 aa1.14□□□□□ -2.23
CSI1YMR025W IMP2P46972 177 aa1.14□□□□□ -2.23
CSI1YMR025W YJR015WP47090 510 aa1.14□□□□□ -2.23
CSI1YMR025W MIC27P50945 234 aa1.14□□□□□ -2.23
CSI1YMR025W MMS2P53152 137 aa1.14□□□□□ -2.23
CSI1YMR025W MRPS17Q03246 237 aaPredicted RBP1.14□□□□□ -2.23
CSI1YMR025W SHH3Q04487 196 aa1.14□□□□□ -2.23
CSI1YMR025W YLR162WQ06235 118 aa1.14□□□□□ -2.23
CSI1YMR025W CCW12Q12127 133 aa1.14□□□□□ -2.23
CSI1YMR025W RPS25AQ3E792 108 aaPredicted RBP1.14□□□□□ -2.23
CSI1YMR025W SHB17P36136 271 aaKnown RBP1.13□□□□□ -2.23
CSI1YMR025W YEA6P39953 335 aa1.13□□□□□ -2.23
CSI1YMR025W YGR025WP53216 100 aa1.13□□□□□ -2.23
CSI1YMR025W TMA23Q03525 211 aa1.13□□□□□ -2.23
CSI1YMR025W YMR253CQ04835 414 aa1.13□□□□□ -2.23
CSI1YMR025W FSF1Q12029 327 aaKnown RBP1.13□□□□□ -2.23
CSI1YMR025W POC4Q12245 148 aaPredicted RBP1.13□□□□□ -2.23
CSI1YMR025W YLR146W-AQ2V2P1 62 aa1.13□□□□□ -2.23
CSI1YMR025W YGR240C-AQ3E786 66 aa1.13□□□□□ -2.23
CSI1YMR025W COA2Q3E823 68 aa1.13□□□□□ -2.23
CSI1YMR025W YHR213W-AQ8TGT4 77 aa1.13□□□□□ -2.23
CSI1YMR025W VAR1P02381 398 aa1.12□□□□□ -2.23
CSI1YMR025W MRS1P07266 363 aa1.12□□□□□ -2.23
CSI1YMR025W RPL27AP0C2H6 136 aaKnown RBP1.12□□□□□ -2.23
CSI1YMR025W ANB1P19211 157 aa1.12□□□□□ -2.23
CSI1YMR025W CKS1P20486 150 aaKnown RBP1.12□□□□□ -2.23
CSI1YMR025W QCR9P22289 66 aa1.12□□□□□ -2.23
CSI1YMR025W HSP12P22943 109 aaKnown RBP1.12□□□□□ -2.23
CSI1YMR025W LSM2P38203 95 aaKnown RBP1.12□□□□□ -2.23
CSI1YMR025W YBR242WP38331 238 aa1.12□□□□□ -2.23
CSI1YMR025W YEA4P40004 342 aa1.12□□□□□ -2.23
CSI1YMR025W YGR269WP40326 108 aa1.12□□□□□ -2.23
CSI1YMR025W YMR082CQ04276 118 aa1.12□□□□□ -2.23
CSI1YMR025W COA4Q05809 96 aa1.12□□□□□ -2.23
CSI1YMR025W RRT7Q07829 113 aa1.12□□□□□ -2.23
CSI1YMR025W RTC6O14464 93 aa1.11□□□□□ -2.23
CSI1YMR025W DER1P38307 211 aa1.11□□□□□ -2.23
CSI1YMR025W AME1P38313 324 aa1.11□□□□□ -2.23
CSI1YMR025W SPI1P40092 148 aa1.11□□□□□ -2.23
CSI1YMR025W TOM7P53507 60 aa1.11□□□□□ -2.23
CSI1YMR025W YDR366CP87287 132 aa1.11□□□□□ -2.23
CSI1YMR025W YLR042CQ07990 161 aa1.11□□□□□ -2.23
CSI1YMR025W LCL2Q08045 131 aa1.11□□□□□ -2.23
CSI1YMR025W YLR236CA0A023PZG4 107 aa1.1□□□□□ -2.23
CSI1YMR025W YPR010C-AA5Z2X5 72 aa1.1□□□□□ -2.23
CSI1YMR025W MBF1O14467 151 aaKnown RBP1.1□□□□□ -2.23
CSI1YMR025W YGL010WP25338 174 aa1.1□□□□□ -2.23
CSI1YMR025W YBR013CP38215 129 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms