RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C OST5Q92316 86 aa1.46□□□□□ -2.18
VPS9YML097C CDC39P25655 2108 aaKnown RBP1.45□□□□□ -2.18
VPS9YML097C TSC11P40061 1430 aa1.45□□□□□ -2.18
VPS9YML097C LHP1P33399 275 aaKnown RBP1.45□□□□□ -2.18
VPS9YML097C TDA2P40045 126 aa1.45□□□□□ -2.18
VPS9YML097C MGR2Q02889 113 aa1.45□□□□□ -2.18
VPS9YML097C YOR072WQ08486 104 aa1.45□□□□□ -2.18
VPS9YML097C YSF3P0C074 85 aaPredicted RBP1.44□□□□□ -2.18
VPS9YML097C YER137CP40083 148 aaKnown RBP1.44□□□□□ -2.18
VPS9YML097C PAU12P53343 120 aa1.44□□□□□ -2.18
VPS9YML097C YIL014C-AQ02598 104 aa1.44□□□□□ -2.18
VPS9YML097C ROM2P51862 1356 aaKnown RBP1.44□□□□□ -2.18
VPS9YML097C YHR130CP38834 111 aa1.43□□□□□ -2.18
VPS9YML097C RGI1P40043 161 aaPredicted RBP1.43□□□□□ -2.18
VPS9YML097C YIR020CP40575 100 aa1.43□□□□□ -2.18
VPS9YML097C YLR365WQ7LIF2 110 aa1.43□□□□□ -2.18
VPS9YML097C GSC2P40989 1895 aa1.43□□□□□ -2.18
VPS9YML097C RPS22AP0C0W1 130 aaKnown RBP1.42□□□□□ -2.18
VPS9YML097C POR2P40478 281 aa1.42□□□□□ -2.18
VPS9YML097C RPS12P48589 143 aaKnown RBP1.42□□□□□ -2.18
VPS9YML097C RPL37AP49166 88 aaKnown RBP1.42□□□□□ -2.18
VPS9YML097C HPA2Q06592 156 aa1.42□□□□□ -2.18
VPS9YML097C RPS22BQ3E7Y3 130 aaKnown RBP1.42□□□□□ -2.18
VPS9YML097C YIL163CP40448 117 aa1.4□□□□□ -2.19
VPS9YML097C GTT1P40582 234 aa1.4□□□□□ -2.19
VPS9YML097C GNA1P43577 159 aaPredicted RBP1.4□□□□□ -2.19
VPS9YML097C RPL22BP56628 122 aaKnown RBP1.4□□□□□ -2.19
VPS9YML097C FIT3Q08907 204 aa1.4□□□□□ -2.19
VPS9YML097C OCA6Q12454 224 aa1.4□□□□□ -2.19
VPS9YML097C KOG1P38873 1557 aa1.4□□□□□ -2.19
VPS9YML097C DNA2P38859 1522 aa1.4□□□□□ -2.19
VPS9YML097C YEA6P39953 335 aa1.39□□□□□ -2.19
VPS9YML097C DAD1Q12248 94 aa1.39□□□□□ -2.19
VPS9YML097C PCC1Q3E833 88 aa1.39□□□□□ -2.19
VPS9YML097C MED11Q99278 115 aa1.39□□□□□ -2.19
VPS9YML097C SRX1P36077 127 aa1.38□□□□□ -2.19
VPS9YML097C YBR013CP38215 129 aa1.38□□□□□ -2.19
VPS9YML097C COX23P38824 151 aa1.38□□□□□ -2.19
VPS9YML097C RPL22AP05749 121 aaKnown RBP1.37□□□□□ -2.19
VPS9YML097C UBC5P15732 148 aa1.37□□□□□ -2.19
VPS9YML097C PAU2P32612 120 aa1.37□□□□□ -2.19
VPS9YML097C YBR090CP38253 122 aa1.37□□□□□ -2.19
VPS9YML097C HUR1P45820 110 aa1.37□□□□□ -2.19
VPS9YML097C ICS3P47034 131 aa1.37□□□□□ -2.19
VPS9YML097C MIC27P50945 234 aa1.37□□□□□ -2.19
VPS9YML097C SWC7Q06707 132 aa1.37□□□□□ -2.19
VPS9YML097C LCL2Q08045 131 aa1.37□□□□□ -2.19
VPS9YML097C COA6Q3E846 104 aa1.37□□□□□ -2.19
VPS9YML097C PAU24P38155 120 aa1.36□□□□□ -2.19
VPS9YML097C SNN1P48232 102 aa1.36□□□□□ -2.19
VPS9YML097C BUD4P47136 1447 aa1.36□□□□□ -2.19
VPS9YML097C SLH1P53327 1967 aaKnown RBP1.36□□□□□ -2.19
VPS9YML097C LYS2P07702 1392 aa1.36□□□□□ -2.19
VPS9YML097C YPK9Q12697 1472 aa1.35□□□□□ -2.19
VPS9YML097C YMR103CQ04436 120 aa1.35□□□□□ -2.19
VPS9YML097C TY3B-IQ7LHG5 1498 aaKnown RBP1.35□□□□□ -2.19
VPS9YML097C TY1B-HO13535 1793 aa1.35□□□□□ -2.19
VPS9YML097C YLR419WQ06698 1435 aaKnown RBP1.34□□□□□ -2.2
VPS9YML097C HHY1P39982 102 aa1.34□□□□□ -2.2
VPS9YML097C FYV7Q12247 151 aa1.34□□□□□ -2.2
VPS9YML097C YOS1Q3E834 85 aa1.34□□□□□ -2.2
VPS9YML097C YHR213W-BQ8TGK1 99 aa1.34□□□□□ -2.2
VPS9YML097C TY4B-JP47024 1803 aa1.33□□□□□ -2.2
VPS9YML097C TOP2P06786 1428 aaKnown RBP1.33□□□□□ -2.2
VPS9YML097C PDR11P40550 1411 aa1.33□□□□□ -2.2
VPS9YML097C GEA1P47102 1408 aaPredicted RBP1.33□□□□□ -2.2
VPS9YML097C MRPL31P14063 131 aaPredicted RBP1.33□□□□□ -2.2
VPS9YML097C UBC4P15731 148 aa1.33□□□□□ -2.2
VPS9YML097C VMA21P41806 77 aa1.33□□□□□ -2.2
VPS9YML097C YLR363W-AQ3E747 85 aa1.33□□□□□ -2.2
VPS9YML097C YLR285C-AQ3E771 56 aa1.33□□□□□ -2.2
VPS9YML097C HUG1Q6Q5K6 68 aa1.33□□□□□ -2.2
VPS9YML097C MIC10Q96VH5 97 aa1.33□□□□□ -2.2
VPS9YML097C KRE5P22023 1365 aa1.32□□□□□ -2.2
VPS9YML097C HFA1P32874 2273 aa1.32□□□□□ -2.2
VPS9YML097C PAU19P0CE85 124 aa1.32□□□□□ -2.2
VPS9YML097C PAU3P25610 124 aa1.32□□□□□ -2.2
VPS9YML097C YGL041C-BQ3E750 60 aa1.32□□□□□ -2.2
VPS9YML097C YGR240C-AQ3E786 66 aa1.32□□□□□ -2.2
VPS9YML097C YCR101CP25607 182 aa1.31□□□□□ -2.2
VPS9YML097C CYB5P40312 120 aa1.31□□□□□ -2.2
VPS9YML097C YMR090WQ04304 227 aaKnown RBP1.31□□□□□ -2.2
VPS9YML097C SWR1Q05471 1514 aa1.3□□□□□ -2.2
VPS9YML097C BUD23P25627 275 aaPredicted RBP1.3□□□□□ -2.2
VPS9YML097C RPL37BP51402 88 aaKnown RBP1.3□□□□□ -2.2
VPS9YML097C MRPS12P53732 153 aa1.3□□□□□ -2.2
VPS9YML097C YCL048W-AQ2V2Q2 79 aa1.3□□□□□ -2.2
VPS9YML097C ENV10Q99382 181 aa1.3□□□□□ -2.2
VPS9YML097C TY1B-DR4Q07793 1604 aa1.3□□□□□ -2.2
VPS9YML097C MVB12P42939 101 aa1.29□□□□□ -2.2
VPS9YML097C VPS55P47111 140 aa1.29□□□□□ -2.2
VPS9YML097C YMR321CQ04898 105 aa1.29□□□□□ -2.2
VPS9YML097C BPT1P14772 1559 aa1.28□□□□□ -2.2
VPS9YML097C YRF1-3P0CX14 1859 aa1.28□□□□□ -2.2
VPS9YML097C YRF1-7P0CX15 1859 aa1.28□□□□□ -2.2
VPS9YML097C YMR141CP40211 102 aa1.28□□□□□ -2.2
VPS9YML097C HMRA2P0CY13 119 aa1.27□□□□□ -2.21
VPS9YML097C PAU16P35994 123 aa1.27□□□□□ -2.21
VPS9YML097C PAU15P40585 124 aa1.27□□□□□ -2.21
VPS9YML097C MIX14Q04341 121 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms