RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C UPS3Q04006 179 aa7.46□□□□□ -1.22
SHB17YKR043C TIM22Q12328 207 aa7.46□□□□□ -1.22
SHB17YKR043C ERG27Q12452 347 aaKnown RBP7.46□□□□□ -1.22
SHB17YKR043C YCR075W-AQ3E830 75 aa7.46□□□□□ -1.22
SHB17YKR043C YCL001W-BQ96VH2 84 aa7.46□□□□□ -1.22
SHB17YKR043C RPL12AP0CX53 165 aaKnown RBP7.45□□□□□ -1.22
SHB17YKR043C RPL12BP0CX54 165 aa7.45□□□□□ -1.22
SHB17YKR043C QRI5P32344 111 aa7.45□□□□□ -1.22
SHB17YKR043C YDR366CP87287 132 aa7.45□□□□□ -1.22
SHB17YKR043C ATP5P09457 212 aa7.44□□□□□ -1.22
SHB17YKR043C RPL16BP26785 198 aaKnown RBP7.44□□□□□ -1.22
SHB17YKR043C RRT13P40042 185 aa7.44□□□□□ -1.22
SHB17YKR043C YPS5P53057 165 aa7.44□□□□□ -1.22
SHB17YKR043C YBR200W-AQ3E755 54 aa7.44□□□□□ -1.22
SHB17YKR043C YDL085C-AQ3E7B7 68 aaKnown RBP7.44□□□□□ -1.22
SHB17YKR043C YBR126W-AQ8TGU7 68 aa7.44□□□□□ -1.22
SHB17YKR043C MRPL31P14063 131 aaPredicted RBP7.43□□□□□ -1.22
SHB17YKR043C BRP1P53194 125 aa7.43□□□□□ -1.22
SHB17YKR043C GIM5Q04493 163 aa7.43□□□□□ -1.22
SHB17YKR043C DIA1P54005 336 aa7.42□□□□□ -1.22
SHB17YKR043C YCH1P42937 148 aa7.41□□□□□ -1.22
SHB17YKR043C SAE3P89114 91 aa7.41□□□□□ -1.22
SHB17YKR043C YGL010WP25338 174 aa7.4□□□□□ -1.22
SHB17YKR043C RPB11P38902 120 aa7.4□□□□□ -1.22
SHB17YKR043C AIM34Q03673 198 aa7.4□□□□□ -1.22
SHB17YKR043C YPR053CQ6Q5F3 151 aa7.4□□□□□ -1.22
SHB17YKR043C CUP2P15315 225 aa7.39□□□□□ -1.23
SHB17YKR043C MIX23P38162 196 aa7.39□□□□□ -1.23
SHB17YKR043C YGR017WP53210 297 aa7.39□□□□□ -1.23
SHB17YKR043C POM33Q12164 279 aa7.39□□□□□ -1.23
SHB17YKR043C GLC8P41818 229 aa7.38□□□□□ -1.23
SHB17YKR043C CSM4Q08955 156 aa7.38□□□□□ -1.23
SHB17YKR043C POR1P04840 283 aaKnown RBP7.37□□□□□ -1.23
SHB17YKR043C HMRA1P0CY11 126 aa7.37□□□□□ -1.23
SHB17YKR043C DAD2P36162 133 aa7.37□□□□□ -1.23
SHB17YKR043C RPR2P40571 144 aa7.37□□□□□ -1.23
SHB17YKR043C ATG33Q06485 197 aa7.37□□□□□ -1.23
SHB17YKR043C YGR240C-AQ3E786 66 aa7.37□□□□□ -1.23
SHB17YKR043C RPL31AP0C2H8 113 aaKnown RBP7.36□□□□□ -1.23
SHB17YKR043C ELF1P36053 145 aa7.36□□□□□ -1.23
SHB17YKR043C KRE9P39005 276 aa7.36□□□□□ -1.23
SHB17YKR043C UIP3P39547 235 aa7.36□□□□□ -1.23
SHB17YKR043C YNL217WP40152 326 aa7.36□□□□□ -1.23
SHB17YKR043C YGL015CP33199 130 aa7.35□□□□□ -1.23
SHB17YKR043C PAM17P36147 197 aa7.35□□□□□ -1.23
SHB17YKR043C YHR140WP38842 239 aa7.35□□□□□ -1.23
SHB17YKR043C THG1P53215 237 aaKnown RBP7.35□□□□□ -1.23
SHB17YKR043C GPI19Q04082 140 aa7.35□□□□□ -1.23
SHB17YKR043C ARC18Q05933 178 aaKnown RBP7.35□□□□□ -1.23
SHB17YKR043C YLR042CQ07990 161 aa7.35□□□□□ -1.23
SHB17YKR043C YPR014CQ6B0W2 109 aa7.35□□□□□ -1.23
SHB17YKR043C YCR023CP25351 611 aa7.34□□□□□ -1.23
SHB17YKR043C PAU7P39545 55 aa7.34□□□□□ -1.23
SHB17YKR043C ATP23P53722 227 aa7.34□□□□□ -1.23
SHB17YKR043C RPL27AP0C2H6 136 aaKnown RBP7.33□□□□□ -1.24
SHB17YKR043C ZRT1P32804 376 aa7.33□□□□□ -1.24
SHB17YKR043C GTO3Q04806 366 aa7.33□□□□□ -1.24
SHB17YKR043C CRC1Q12289 327 aa7.33□□□□□ -1.24
SHB17YKR043C CDC40P40968 455 aaPredicted RBP7.32□□□□□ -1.24
SHB17YKR043C RPS22BQ3E7Y3 130 aaKnown RBP7.32□□□□□ -1.24
SHB17YKR043C HAP3P13434 144 aa7.31□□□□□ -1.24
SHB17YKR043C PAU16P35994 123 aa7.31□□□□□ -1.24
SHB17YKR043C DGA1Q08650 418 aa7.3□□□□□ -1.24
SHB17YKR043C YPT53P36019 220 aa7.29□□□□□ -1.24
SHB17YKR043C SDS23P53172 527 aa7.29□□□□□ -1.24
SHB17YKR043C CNL1Q06333 122 aa7.29□□□□□ -1.24
SHB17YKR043C NAT5Q08689 176 aa7.29□□□□□ -1.24
SHB17YKR043C CWC27Q02770 301 aa7.28□□□□□ -1.24
SHB17YKR043C TVP18Q04767 167 aa7.28□□□□□ -1.24
SHB17YKR043C PAU23Q07987 124 aa7.28□□□□□ -1.24
SHB17YKR043C PAU17Q12370 124 aa7.28□□□□□ -1.24
SHB17YKR043C TEM1P38987 245 aa7.27□□□□□ -1.25
SHB17YKR043C SPC1P46965 94 aa7.27□□□□□ -1.25
SHB17YKR043C PKR1Q03880 122 aaKnown RBP7.27□□□□□ -1.25
SHB17YKR043C TPT1Q12272 230 aaKnown RBP7.27□□□□□ -1.25
SHB17YKR043C YCR007CP25354 239 aa7.26□□□□□ -1.25
SHB17YKR043C RPL42AP0CX27 106 aaKnown RBP7.25□□□□□ -1.25
SHB17YKR043C RPL42BP0CX28 106 aaKnown RBP7.25□□□□□ -1.25
SHB17YKR043C RPL23AP0CX41 137 aaKnown RBP7.25□□□□□ -1.25
SHB17YKR043C RPL23BP0CX42 137 aaKnown RBP7.25□□□□□ -1.25
SHB17YKR043C KTI12P34253 313 aaKnown RBP7.25□□□□□ -1.25
SHB17YKR043C YKR032WP36127 104 aa7.25□□□□□ -1.25
SHB17YKR043C YER134CP40081 178 aa7.25□□□□□ -1.25
SHB17YKR043C YCR024C-BQ3E7Z8 88 aa7.25□□□□□ -1.25
SHB17YKR043C UBC5P15732 148 aa7.24□□□□□ -1.25
SHB17YKR043C DPP1Q05521 289 aa7.24□□□□□ -1.25
SHB17YKR043C FSF1Q12029 327 aaKnown RBP7.24□□□□□ -1.25
SHB17YKR043C YGL118CP53132 145 aa7.23□□□□□ -1.25
SHB17YKR043C PMP3P87284 55 aa7.23□□□□□ -1.25
SHB17YKR043C YDL157CQ12082 118 aa7.23□□□□□ -1.25
SHB17YKR043C PET8P38921 284 aa7.22□□□□□ -1.25
SHB17YKR043C YJL028WP47062 111 aa7.22□□□□□ -1.25
SHB17YKR043C YLL066W-BQ8TGJ7 56 aa7.22□□□□□ -1.25
SHB17YKR043C PBA1Q05778 276 aa7.21□□□□□ -1.26
SHB17YKR043C SEC4P07560 215 aaKnown RBP7.2□□□□□ -1.26
SHB17YKR043C GSP1P32835 219 aaKnown RBP7.2□□□□□ -1.26
SHB17YKR043C GSP2P32836 220 aaKnown RBP7.2□□□□□ -1.26
SHB17YKR043C DCV1P43595 202 aa7.2□□□□□ -1.26
SHB17YKR043C ERI1P62651 68 aaKnown RBP7.2□□□□□ -1.26
SHB17YKR043C YPR195CQ06594 109 aa7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms