RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W IRC25Q07951 179 aa3.76□□□□□ -1.81
ABF1YKL112W YMR175W-AQ3E766 64 aa3.76□□□□□ -1.81
ABF1YKL112W YFR032C-BQ8TGU2 87 aa3.76□□□□□ -1.81
ABF1YKL112W CYC1P00044 109 aaPredicted RBP3.75□□□□□ -1.81
ABF1YKL112W ANT1Q06497 328 aa3.75□□□□□ -1.81
ABF1YKL112W PAU19P0CE85 124 aa3.75□□□□□ -1.81
ABF1YKL112W PAU21P0CE86 164 aa3.75□□□□□ -1.81
ABF1YKL112W PAU22P0CE87 164 aa3.75□□□□□ -1.81
ABF1YKL112W PAU3P25610 124 aa3.75□□□□□ -1.81
ABF1YKL112W SWD3P38123 315 aa3.75□□□□□ -1.81
ABF1YKL112W HTD2P38790 280 aaKnown RBP3.75□□□□□ -1.81
ABF1YKL112W YND1P40009 630 aa3.75□□□□□ -1.81
ABF1YKL112W TPC1P53257 314 aa3.75□□□□□ -1.81
ABF1YKL112W YDR042CQ03205 200 aa3.75□□□□□ -1.81
ABF1YKL112W YLR346CQ06139 101 aa3.75□□□□□ -1.81
ABF1YKL112W YCL021W-AQ96VH3 125 aa3.75□□□□□ -1.81
ABF1YKL112W RPS8AP0CX39 200 aaKnown RBP3.74□□□□□ -1.81
ABF1YKL112W RPS8BP0CX40 200 aaKnown RBP3.74□□□□□ -1.81
ABF1YKL112W ERG4P25340 473 aa3.74□□□□□ -1.81
ABF1YKL112W RPB7P34087 171 aa3.74□□□□□ -1.81
ABF1YKL112W ECM34P38728 170 aa3.74□□□□□ -1.81
ABF1YKL112W ATO3Q12359 275 aa3.74□□□□□ -1.81
ABF1YKL112W YIL102C-AQ2V2P5 75 aa3.74□□□□□ -1.81
ABF1YKL112W TDA8Q6B2U8 126 aa3.74□□□□□ -1.81
ABF1YKL112W MAK32P23060 363 aa3.73□□□□□ -1.81
ABF1YKL112W AIM26P32858 118 aa3.73□□□□□ -1.81
ABF1YKL112W GCV3P39726 170 aaPredicted RBP3.73□□□□□ -1.81
ABF1YKL112W SKI6P46948 246 aaPredicted RBP3.73□□□□□ -1.81
ABF1YKL112W SWT21P53873 357 aaPredicted RBP3.73□□□□□ -1.81
ABF1YKL112W TOM6P33448 61 aa3.73□□□□□ -1.81
ABF1YKL112W YBR292CP38357 123 aa3.73□□□□□ -1.81
ABF1YKL112W PEP8P40335 379 aa3.73□□□□□ -1.81
ABF1YKL112W DDR48P18899 430 aaKnown RBP3.72□□□□□ -1.81
ABF1YKL112W YAL064WP39711 94 aa3.72□□□□□ -1.81
ABF1YKL112W NIP7Q08962 181 aaKnown RBP3.72□□□□□ -1.81
ABF1YKL112W YLR363W-AQ3E747 85 aa3.72□□□□□ -1.81
ABF1YKL112W BPH1P25356 2167 aa3.72□□□□□ -1.81
ABF1YKL112W RRT7Q07829 113 aa3.72□□□□□ -1.81
ABF1YKL112W YAL063C-AQ3E791 96 aa3.72□□□□□ -1.81
ABF1YKL112W YLR365WQ7LIF2 110 aa3.72□□□□□ -1.81
ABF1YKL112W MDN1Q12019 4910 aaKnown RBP3.71□□□□□ -1.82
ABF1YKL112W GPX1P36014 167 aa3.71□□□□□ -1.82
ABF1YKL112W YCR041WP37265 110 aa3.71□□□□□ -1.82
ABF1YKL112W FYV4P38783 130 aaPredicted RBP3.71□□□□□ -1.82
ABF1YKL112W YER135CP40082 130 aa3.71□□□□□ -1.82
ABF1YKL112W MIC27P50945 234 aa3.71□□□□□ -1.82
ABF1YKL112W YLR296WQ05898 108 aa3.71□□□□□ -1.82
ABF1YKL112W YML100W-AQ8TGT0 57 aa3.71□□□□□ -1.82
ABF1YKL112W BET1P22804 142 aa3.7□□□□□ -1.82
ABF1YKL112W OM14P38325 134 aa3.7□□□□□ -1.82
ABF1YKL112W YNR064CP53750 290 aa3.7□□□□□ -1.82
ABF1YKL112W MIX14Q04341 121 aa3.7□□□□□ -1.82
ABF1YKL112W ELP6Q04868 273 aa3.7□□□□□ -1.82
ABF1YKL112W YOL014WQ08110 124 aa3.7□□□□□ -1.82
ABF1YKL112W YOR385WQ08909 290 aa3.7□□□□□ -1.82
ABF1YKL112W EMC6Q12431 108 aa3.7□□□□□ -1.82
ABF1YKL112W YFL041W-AQ3E817 63 aa3.7□□□□□ -1.82
ABF1YKL112W YMR316C-AI2HB70 103 aa3.7□□□□□ -1.82
ABF1YKL112W YFL019CP43576 117 aa3.7□□□□□ -1.82
ABF1YKL112W PGU1P47180 361 aa3.7□□□□□ -1.82
ABF1YKL112W RSM19P53733 91 aaPredicted RBP3.7□□□□□ -1.82
ABF1YKL112W POP3P53833 195 aaPredicted RBP3.7□□□□□ -1.82
ABF1YKL112W USV1Q12132 391 aa3.7□□□□□ -1.82
ABF1YKL112W YER145C-AA0A023PYF4 145 aa3.69□□□□□ -1.82
ABF1YKL112W PAU16P35994 123 aa3.69□□□□□ -1.82
ABF1YKL112W EDC2P40023 145 aaPredicted RBP3.69□□□□□ -1.82
ABF1YKL112W SYM1Q06563 197 aa3.69□□□□□ -1.82
ABF1YKL112W RPB9P27999 122 aa3.69□□□□□ -1.82
ABF1YKL112W SNF11P38956 169 aa3.69□□□□□ -1.82
ABF1YKL112W ASP1P38986 381 aaPredicted RBP3.69□□□□□ -1.82
ABF1YKL112W YNL217WP40152 326 aa3.69□□□□□ -1.82
ABF1YKL112W HAL1Q01766 294 aa3.69□□□□□ -1.82
ABF1YKL112W YDR102CQ03864 110 aa3.69□□□□□ -1.82
ABF1YKL112W FYV12Q08559 129 aa3.69□□□□□ -1.82
ABF1YKL112W ATG41Q12048 136 aa3.69□□□□□ -1.82
ABF1YKL112W ODC2Q99297 307 aa3.69□□□□□ -1.82
ABF1YKL112W URA2P07259 2214 aaKnown RBP3.69□□□□□ -1.82
ABF1YKL112W YHR213WP0CI67 198 aa3.68□□□□□ -1.82
ABF1YKL112W URA5P13298 226 aaKnown RBP3.68□□□□□ -1.82
ABF1YKL112W NHP2P32495 156 aaPredicted RBP3.68□□□□□ -1.82
ABF1YKL112W YEL045CP32616 141 aa3.68□□□□□ -1.82
ABF1YKL112W BNS1P50084 137 aa3.68□□□□□ -1.82
ABF1YKL112W SPG1P50088 95 aa3.68□□□□□ -1.82
ABF1YKL112W LPP1Q04396 274 aa3.68□□□□□ -1.82
ABF1YKL112W RIM9Q04734 239 aa3.68□□□□□ -1.82
ABF1YKL112W MIM1Q08176 113 aa3.68□□□□□ -1.82
ABF1YKL112W YLR111WQ12528 110 aa3.68□□□□□ -1.82
ABF1YKL112W YCR025CP25352 136 aa3.68□□□□□ -1.82
ABF1YKL112W TDA2P40045 126 aa3.68□□□□□ -1.82
ABF1YKL112W LYS5P50113 272 aa3.68□□□□□ -1.82
ABF1YKL112W YKR045CP36138 183 aa3.67□□□□□ -1.82
ABF1YKL112W PAU5P43575 122 aa3.67□□□□□ -1.82
ABF1YKL112W YFL015CP43578 164 aa3.67□□□□□ -1.82
ABF1YKL112W NPC2Q12408 173 aa3.67□□□□□ -1.82
ABF1YKL112W YBL008W-AQ3E821 79 aa3.67□□□□□ -1.82
ABF1YKL112W YOR032W-AQ8TGS1 66 aa3.67□□□□□ -1.82
ABF1YKL112W YKL044WP36092 106 aa3.66□□□□□ -1.82
ABF1YKL112W YHL042WP38729 150 aa3.66□□□□□ -1.82
ABF1YKL112W RRT13P40042 185 aa3.66□□□□□ -1.82
ABF1YKL112W YJL028WP47062 111 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms