RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W SHH3Q04487 196 aa1.65□□□□□ -2.15
NUP100YKL068W GTT2Q12390 233 aa1.65□□□□□ -2.15
NUP100YKL068W MLP1Q02455 1875 aaKnown RBP1.64□□□□□ -2.15
NUP100YKL068W YGL041W-AP0C5N3 154 aa1.64□□□□□ -2.15
NUP100YKL068W YOL162WP0CF19 215 aa1.64□□□□□ -2.15
NUP100YKL068W YEL073CP39974 107 aa1.64□□□□□ -2.15
NUP100YKL068W YIR035CP40579 254 aa1.64□□□□□ -2.15
NUP100YKL068W YGR026WP53217 278 aa1.64□□□□□ -2.15
NUP100YKL068W IRC23Q08416 157 aa1.64□□□□□ -2.15
NUP100YKL068W YOR268CQ08734 132 aa1.64□□□□□ -2.15
NUP100YKL068W YPR063CQ12160 140 aa1.64□□□□□ -2.15
NUP100YKL068W GAA1P39012 614 aa1.64□□□□□ -2.15
NUP100YKL068W YFR035CP43608 114 aa1.64□□□□□ -2.15
NUP100YKL068W YJL027CP47063 138 aaPredicted RBP1.64□□□□□ -2.15
NUP100YKL068W KEI1Q06346 221 aa1.64□□□□□ -2.15
NUP100YKL068W YOR385WQ08909 290 aa1.64□□□□□ -2.15
NUP100YKL068W YGL194C-AQ2V2P6 80 aa1.64□□□□□ -2.15
NUP100YKL068W PIR5P46999 287 aa1.63□□□□□ -2.15
NUP100YKL068W COX5BP00425 151 aa1.63□□□□□ -2.15
NUP100YKL068W YCR099CP25657 155 aa1.63□□□□□ -2.15
NUP100YKL068W YHL042WP38729 150 aa1.63□□□□□ -2.15
NUP100YKL068W MZM1Q03429 123 aaPredicted RBP1.63□□□□□ -2.15
NUP100YKL068W YHP1Q04116 353 aa1.63□□□□□ -2.15
NUP100YKL068W RAS2P01120 322 aaKnown RBP1.62□□□□□ -2.15
NUP100YKL068W YHR180WP38868 163 aa1.62□□□□□ -2.15
NUP100YKL068W CCS1P40202 249 aaKnown RBP1.62□□□□□ -2.15
NUP100YKL068W FLX1P40464 311 aa1.62□□□□□ -2.15
NUP100YKL068W YFR045WP43617 309 aa1.62□□□□□ -2.15
NUP100YKL068W YDL241WQ07738 123 aa1.62□□□□□ -2.15
NUP100YKL068W RPL13AQ12690 199 aaPredicted RBP1.62□□□□□ -2.15
NUP100YKL068W YOR381W-AQ3E804 55 aa1.62□□□□□ -2.15
NUP100YKL068W MED11Q99278 115 aa1.62□□□□□ -2.15
NUP100YKL068W RPS19AP07280 144 aaKnown RBP1.62□□□□□ -2.15
NUP100YKL068W RPS19BP07281 144 aaPredicted RBP1.62□□□□□ -2.15
NUP100YKL068W PRE1P22141 198 aaKnown RBP1.62□□□□□ -2.15
NUP100YKL068W YEL067CP39978 195 aa1.62□□□□□ -2.15
NUP100YKL068W KNH1P50112 268 aa1.62□□□□□ -2.15
NUP100YKL068W GIS2P53849 153 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
NUP100YKL068W PIR1Q03178 341 aa1.62□□□□□ -2.15
NUP100YKL068W ATG10Q07879 167 aa1.62□□□□□ -2.15
NUP100YKL068W SNU13P39990 126 aaKnown RBP1.61□□□□□ -2.15
NUP100YKL068W DOC1P53068 250 aa1.61□□□□□ -2.15
NUP100YKL068W UPS3Q04006 179 aa1.61□□□□□ -2.15
NUP100YKL068W SCS22Q6Q595 175 aa1.61□□□□□ -2.15
NUP100YKL068W EMP24P32803 203 aaKnown RBP1.61□□□□□ -2.15
NUP100YKL068W LSM8P47093 109 aaKnown RBP1.61□□□□□ -2.15
NUP100YKL068W SOM1Q05676 74 aa1.61□□□□□ -2.15
NUP100YKL068W TMA19P35691 167 aaKnown RBP1.61□□□□□ -2.15
NUP100YKL068W ERG25P53045 309 aa1.61□□□□□ -2.15
NUP100YKL068W YPR174CQ06616 221 aaPredicted RBP1.61□□□□□ -2.15
NUP100YKL068W SPO73P40031 143 aa1.6□□□□□ -2.15
NUP100YKL068W YPR195CQ06594 109 aa1.6□□□□□ -2.15
NUP100YKL068W KSH1Q8TGJ3 72 aa1.6□□□□□ -2.15
NUP100YKL068W FAS1P07149 2051 aaKnown RBP1.6□□□□□ -2.15
NUP100YKL068W UBC4P15731 148 aa1.6□□□□□ -2.15
NUP100YKL068W MIG1P27705 504 aa1.6□□□□□ -2.15
NUP100YKL068W SCM4P32564 187 aa1.6□□□□□ -2.15
NUP100YKL068W CLB6P32943 380 aa1.6□□□□□ -2.15
NUP100YKL068W QCR10P37299 77 aa1.6□□□□□ -2.15
NUP100YKL068W YHR130CP38834 111 aa1.6□□□□□ -2.15
NUP100YKL068W FIT1Q04433 528 aa1.6□□□□□ -2.15
NUP100YKL068W ATG41Q12048 136 aa1.6□□□□□ -2.15
NUP100YKL068W YEL045CP32616 141 aa1.59□□□□□ -2.15
NUP100YKL068W YKL044WP36092 106 aa1.59□□□□□ -2.15
NUP100YKL068W RPL33BP41056 107 aaKnown RBP1.59□□□□□ -2.15
NUP100YKL068W MPC1P53157 130 aaKnown RBP1.59□□□□□ -2.15
NUP100YKL068W THG1P53215 237 aaKnown RBP1.59□□□□□ -2.15
NUP100YKL068W YMR090WQ04304 227 aaKnown RBP1.59□□□□□ -2.15
NUP100YKL068W IRC19Q07843 230 aa1.59□□□□□ -2.15
NUP100YKL068W YPR013CQ12145 317 aa1.59□□□□□ -2.15
NUP100YKL068W YOR015WQ12169 119 aa1.59□□□□□ -2.15
NUP100YKL068W INO4P13902 151 aa1.59□□□□□ -2.16
NUP100YKL068W YLR236CA0A023PZG4 107 aa1.58□□□□□ -2.16
NUP100YKL068W RPS23AP0CX29 145 aaKnown RBP1.58□□□□□ -2.16
NUP100YKL068W RPS23BP0CX30 145 aa1.58□□□□□ -2.16
NUP100YKL068W MAK31P23059 88 aa1.58□□□□□ -2.16
NUP100YKL068W YER084WP40057 128 aa1.58□□□□□ -2.16
NUP100YKL068W YIL059CP40520 121 aa1.58□□□□□ -2.16
NUP100YKL068W ATP19P81451 68 aa1.58□□□□□ -2.16
NUP100YKL068W RAF1Q06891 181 aa1.58□□□□□ -2.16
NUP100YKL068W YLR365WQ7LIF2 110 aa1.58□□□□□ -2.16
NUP100YKL068W CCW14O13547 238 aa1.58□□□□□ -2.16
NUP100YKL068W FYV5P25585 152 aa1.58□□□□□ -2.16
NUP100YKL068W SNF11P38956 169 aa1.58□□□□□ -2.16
NUP100YKL068W TMC1Q08422 150 aaPredicted RBP1.58□□□□□ -2.16
NUP100YKL068W RAD28Q12021 506 aa1.58□□□□□ -2.16
NUP100YKL068W MIC10Q96VH5 97 aa1.58□□□□□ -2.16
NUP100YKL068W ATG40Q99325 256 aa1.58□□□□□ -2.16
NUP100YKL068W ECM31P38122 312 aa1.57□□□□□ -2.16
NUP100YKL068W YFL012WP43580 148 aa1.57□□□□□ -2.16
NUP100YKL068W CIS3P47001 227 aa1.57□□□□□ -2.16
NUP100YKL068W BOL2P53082 120 aa1.57□□□□□ -2.16
NUP100YKL068W YMR082CQ04276 118 aa1.57□□□□□ -2.16
NUP100YKL068W TIR3P40552 269 aa1.57□□□□□ -2.16
NUP100YKL068W YPI1P43587 155 aa1.57□□□□□ -2.16
NUP100YKL068W YGR269WP40326 108 aa1.57□□□□□ -2.16
NUP100YKL068W YCL001W-AP87012 153 aa1.57□□□□□ -2.16
NUP100YKL068W GRX5Q02784 150 aa1.57□□□□□ -2.16
NUP100YKL068W YML079WQ03629 201 aa1.57□□□□□ -2.16
NUP100YKL068W FIT3Q08907 204 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms