RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W SDH8P38345 138 aa10.54□□□□□ -0.72
RPN10YHR200W CGR1P53188 120 aa10.54□□□□□ -0.72
RPN10YHR200W YOL085CQ99345 113 aa10.54□□□□□ -0.72
RPN10YHR200W RPS11AP0CX47 156 aaKnown RBP10.53□□□□□ -0.72
RPN10YHR200W RPS11BP0CX48 156 aaKnown RBP10.53□□□□□ -0.72
RPN10YHR200W TVP18Q04767 167 aa10.53□□□□□ -0.72
RPN10YHR200W Q0255P03881 472 aa10.52□□□□□ -0.73
RPN10YHR200W MRPL11P36521 249 aaPredicted RBP10.52□□□□□ -0.73
RPN10YHR200W OST3P48439 350 aa10.52□□□□□ -0.73
RPN10YHR200W YBR200W-AQ3E755 54 aa10.52□□□□□ -0.73
RPN10YHR200W DYN1P36022 4092 aa10.51□□□□□ -0.73
RPN10YHR200W TEM1P38987 245 aa10.51□□□□□ -0.73
RPN10YHR200W YCH1P42937 148 aa10.51□□□□□ -0.73
RPN10YHR200W CYC7P00045 113 aa10.5□□□□□ -0.73
RPN10YHR200W BRP1P53194 125 aa10.5□□□□□ -0.73
RPN10YHR200W HTL1Q9URQ5 78 aa10.5□□□□□ -0.73
RPN10YHR200W LSM8P47093 109 aaKnown RBP10.49□□□□□ -0.73
RPN10YHR200W YBR126W-AQ8TGU7 68 aa10.48□□□□□ -0.73
RPN10YHR200W RPL42AP0CX27 106 aaKnown RBP10.47□□□□□ -0.73
RPN10YHR200W RPL42BP0CX28 106 aaKnown RBP10.47□□□□□ -0.73
RPN10YHR200W RPL16BP26785 198 aaKnown RBP10.47□□□□□ -0.73
RPN10YHR200W AIM34Q03673 198 aa10.47□□□□□ -0.73
RPN10YHR200W YCR075W-AQ3E830 75 aa10.47□□□□□ -0.73
RPN10YHR200W YIL134C-AQ45U18 67 aa10.47□□□□□ -0.73
RPN10YHR200W GSP1P32835 219 aaKnown RBP10.46□□□□□ -0.73
RPN10YHR200W GSP2P32836 220 aaKnown RBP10.46□□□□□ -0.73
RPN10YHR200W YER134CP40081 178 aa10.46□□□□□ -0.73
RPN10YHR200W COX12Q01519 83 aa10.46□□□□□ -0.73
RPN10YHR200W YPR053CQ6Q5F3 151 aa10.46□□□□□ -0.73
RPN10YHR200W YLR281CQ05863 155 aa10.45□□□□□ -0.74
RPN10YHR200W CNL1Q06333 122 aa10.45□□□□□ -0.74
RPN10YHR200W MLF3P32047 452 aa10.44□□□□□ -0.74
RPN10YHR200W KTI12P34253 313 aaKnown RBP10.44□□□□□ -0.74
RPN10YHR200W YKR032WP36127 104 aa10.44□□□□□ -0.74
RPN10YHR200W DUO1P53168 247 aaKnown RBP10.44□□□□□ -0.74
RPN10YHR200W SEN15Q04675 128 aa10.44□□□□□ -0.74
RPN10YHR200W MSC3Q05812 728 aa10.44□□□□□ -0.74
RPN10YHR200W ERG27Q12452 347 aaKnown RBP10.44□□□□□ -0.74
RPN10YHR200W YNL200CP40165 246 aaKnown RBP10.42□□□□□ -0.74
RPN10YHR200W YLR122CQ12312 125 aa10.42□□□□□ -0.74
RPN10YHR200W PAU16P35994 123 aa10.41□□□□□ -0.74
RPN10YHR200W YER076CP40049 302 aa10.41□□□□□ -0.74
RPN10YHR200W VHS2P40463 436 aa10.41□□□□□ -0.74
RPN10YHR200W YFR035CP43608 114 aa10.41□□□□□ -0.74
RPN10YHR200W ERV14P53173 138 aa10.41□□□□□ -0.74
RPN10YHR200W SAL1D6W196 494 aa10.4□□□□□ -0.74
RPN10YHR200W PFY1P07274 126 aa10.4□□□□□ -0.74
RPN10YHR200W YCR023CP25351 611 aa10.4□□□□□ -0.74
RPN10YHR200W CDC40P40968 455 aaPredicted RBP10.4□□□□□ -0.74
RPN10YHR200W MGR2Q02889 113 aa10.4□□□□□ -0.74
RPN10YHR200W VPS71Q03433 280 aa10.4□□□□□ -0.74
RPN10YHR200W PET8P38921 284 aa10.39□□□□□ -0.75
RPN10YHR200W RRT13P40042 185 aa10.39□□□□□ -0.75
RPN10YHR200W ATP23P53722 227 aa10.39□□□□□ -0.75
RPN10YHR200W YPR014CQ6B0W2 109 aa10.39□□□□□ -0.75
RPN10YHR200W YLR042CQ07990 161 aa10.38□□□□□ -0.75
RPN10YHR200W YIL014C-AQ02598 104 aa10.37□□□□□ -0.75
RPN10YHR200W YPS5P53057 165 aa10.36□□□□□ -0.75
RPN10YHR200W YLR050CQ12155 161 aaKnown RBP10.36□□□□□ -0.75
RPN10YHR200W YKR070WP36151 352 aaKnown RBP10.35□□□□□ -0.75
RPN10YHR200W DCV1P43595 202 aa10.35□□□□□ -0.75
RPN10YHR200W TOS6P48560 102 aa10.35□□□□□ -0.75
RPN10YHR200W POP3P53833 195 aaPredicted RBP10.35□□□□□ -0.75
RPN10YHR200W DPP1Q05521 289 aa10.35□□□□□ -0.75
RPN10YHR200W YJL028WP47062 111 aa10.34□□□□□ -0.75
RPN10YHR200W FCF1Q05498 189 aaPredicted RBP10.34□□□□□ -0.75
RPN10YHR200W FUN14P18411 198 aa10.33□□□□□ -0.76
RPN10YHR200W GLO1P50107 326 aa10.33□□□□□ -0.76
RPN10YHR200W FYV7Q12247 151 aa10.33□□□□□ -0.76
RPN10YHR200W RPL27BP0C2H7 136 aaKnown RBP10.32□□□□□ -0.76
RPN10YHR200W AQY1P0CD91 305 aa10.32□□□□□ -0.76
RPN10YHR200W PCL2P25693 308 aa10.32□□□□□ -0.76
RPN10YHR200W YNL217WP40152 326 aa10.32□□□□□ -0.76
RPN10YHR200W YDR042CQ03205 200 aa10.32□□□□□ -0.76
RPN10YHR200W VAM10Q08474 114 aa10.32□□□□□ -0.76
RPN10YHR200W SGF11Q03067 99 aa10.31□□□□□ -0.76
RPN10YHR200W YGR240C-AQ3E786 66 aa10.31□□□□□ -0.76
RPN10YHR200W APS1P35181 156 aa10.3□□□□□ -0.76
RPN10YHR200W PMP3P87284 55 aa10.3□□□□□ -0.76
RPN10YHR200W DGA1Q08650 418 aa10.3□□□□□ -0.76
RPN10YHR200W TPT1Q12272 230 aaKnown RBP10.3□□□□□ -0.76
RPN10YHR200W YOR008C-AQ3E7B9 74 aa10.3□□□□□ -0.76
RPN10YHR200W YCR001WP25347 104 aa10.29□□□□□ -0.76
RPN10YHR200W URM1P40554 99 aaPredicted RBP10.29□□□□□ -0.76
RPN10YHR200W PRE1P22141 198 aaKnown RBP10.27□□□□□ -0.77
RPN10YHR200W PKR1Q03880 122 aaKnown RBP10.27□□□□□ -0.77
RPN10YHR200W MRPL44P19956 98 aa10.26□□□□□ -0.77
RPN10YHR200W HMRA2P0CY13 119 aa10.25□□□□□ -0.77
RPN10YHR200W NRG2P38082 220 aa10.25□□□□□ -0.77
RPN10YHR200W FYV4P38783 130 aaPredicted RBP10.25□□□□□ -0.77
RPN10YHR200W KRE9P39005 276 aa10.25□□□□□ -0.77
RPN10YHR200W HAC1P41546 238 aa10.25□□□□□ -0.77
RPN10YHR200W ATP5P09457 212 aa10.23□□□□□ -0.77
RPN10YHR200W YCR007CP25354 239 aa10.23□□□□□ -0.77
RPN10YHR200W YMR103CQ04436 120 aa10.23□□□□□ -0.77
RPN10YHR200W SCM4P32564 187 aa10.22□□□□□ -0.77
RPN10YHR200W ERI1P62651 68 aaKnown RBP10.22□□□□□ -0.77
RPN10YHR200W UBC5P15732 148 aa10.21□□□□□ -0.77
RPN10YHR200W MRP49P32388 137 aa10.21□□□□□ -0.77
RPN10YHR200W MSL1P40567 111 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 99.5 ms