RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C MRPL31P14063 131 aaPredicted RBP2.54□□□□□ -2
RPN1YHR027C UBC4P15731 148 aa2.54□□□□□ -2
RPN1YHR027C RPS26AP39938 119 aaKnown RBP2.54□□□□□ -2
RPN1YHR027C RPS26BP39939 119 aaKnown RBP2.54□□□□□ -2
RPN1YHR027C YJR115WP47152 169 aa2.54□□□□□ -2
RPN1YHR027C MST27P53176 234 aa2.54□□□□□ -2
RPN1YHR027C CUZ1P53899 274 aa2.54□□□□□ -2
RPN1YHR027C MIX14Q04341 121 aa2.54□□□□□ -2
RPN1YHR027C YLR012CQ07927 99 aa2.54□□□□□ -2
RPN1YHR027C YOL029CQ08187 201 aa2.54□□□□□ -2
RPN1YHR027C IRC23Q08416 157 aa2.54□□□□□ -2
RPN1YHR027C YPR053CQ6Q5F3 151 aa2.54□□□□□ -2
RPN1YHR027C DSE2P38844 325 aa2.54□□□□□ -2
RPN1YHR027C YAR029WP39549 74 aa2.54□□□□□ -2
RPN1YHR027C RRT13P40042 185 aa2.54□□□□□ -2
RPN1YHR027C CYR1P08678 2026 aaKnown RBP2.54□□□□□ -2
RPN1YHR027C YHR173CP38864 112 aa2.53□□□□□ -2
RPN1YHR027C PEX22P39718 180 aa2.53□□□□□ -2
RPN1YHR027C API2Q04413 109 aa2.53□□□□□ -2
RPN1YHR027C GAT3Q07928 141 aa2.53□□□□□ -2
RPN1YHR027C PIR1Q03178 341 aa2.53□□□□□ -2
RPN1YHR027C MET32Q12041 191 aa2.53□□□□□ -2
RPN1YHR027C AQY1P0CD91 305 aa2.52□□□□□ -2.01
RPN1YHR027C DAT1P13483 248 aaKnown RBP2.52□□□□□ -2.01
RPN1YHR027C SWD3P38123 315 aa2.52□□□□□ -2.01
RPN1YHR027C VTC1P40046 129 aaRIP-Chip data2.52□□□□□ -2.01not detected
RPN1YHR027C YIA6P40556 373 aa2.52□□□□□ -2.01
RPN1YHR027C YFL051CP43552 160 aa2.52□□□□□ -2.01
RPN1YHR027C YNL046WP53956 172 aa2.52□□□□□ -2.01
RPN1YHR027C HAL1Q01766 294 aa2.52□□□□□ -2.01
RPN1YHR027C YPL261CQ08976 102 aa2.52□□□□□ -2.01
RPN1YHR027C TDA8Q6B2U8 126 aa2.52□□□□□ -2.01
RPN1YHR027C RPL20AP0CX23 172 aaKnown RBP2.52□□□□□ -2.01
RPN1YHR027C RPL20BP0CX24 172 aaPredicted RBP2.52□□□□□ -2.01
RPN1YHR027C RPL42AP0CX27 106 aaKnown RBP2.52□□□□□ -2.01
RPN1YHR027C RPL42BP0CX28 106 aaKnown RBP2.52□□□□□ -2.01
RPN1YHR027C HUA1P40325 198 aa2.52□□□□□ -2.01
RPN1YHR027C SWS2P53937 143 aa2.52□□□□□ -2.01
RPN1YHR027C TIM22Q12328 207 aa2.52□□□□□ -2.01
RPN1YHR027C YDR246W-AQ3E763 66 aa2.52□□□□□ -2.01
RPN1YHR027C BET1P22804 142 aa2.52□□□□□ -2.01
RPN1YHR027C YKR032WP36127 104 aa2.52□□□□□ -2.01
RPN1YHR027C PAU7P39545 55 aa2.52□□□□□ -2.01
RPN1YHR027C SIM1P40472 476 aa2.52□□□□□ -2.01
RPN1YHR027C GAT4P40569 121 aa2.52□□□□□ -2.01
RPN1YHR027C VEL1P53058 206 aa2.52□□□□□ -2.01
RPN1YHR027C YOL118CQ08259 102 aa2.52□□□□□ -2.01
RPN1YHR027C RPL18AP0CX49 186 aaKnown RBP2.51□□□□□ -2.01
RPN1YHR027C RPL18BP0CX50 186 aaKnown RBP2.51□□□□□ -2.01
RPN1YHR027C FPR2P32472 135 aa2.51□□□□□ -2.01
RPN1YHR027C YER187WP40102 141 aa2.51□□□□□ -2.01
RPN1YHR027C YNL217WP40152 326 aa2.51□□□□□ -2.01
RPN1YHR027C YNL208WP40159 199 aaKnown RBP2.51□□□□□ -2.01
RPN1YHR027C RSM19P53733 91 aaPredicted RBP2.51□□□□□ -2.01
RPN1YHR027C FIT2Q08906 153 aa2.51□□□□□ -2.01
RPN1YHR027C YDR461C-AQ2V2P7 80 aa2.51□□□□□ -2.01
RPN1YHR027C IGO2Q9P305 131 aa2.51□□□□□ -2.01
RPN1YHR027C PFY1P07274 126 aa2.51□□□□□ -2.01
RPN1YHR027C RPL16BP26785 198 aaKnown RBP2.51□□□□□ -2.01
RPN1YHR027C YRA2P36036 203 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
RPN1YHR027C UBC13P52490 153 aa2.51□□□□□ -2.01
RPN1YHR027C TOM7P53507 60 aa2.51□□□□□ -2.01
RPN1YHR027C YHR213WP0CI67 198 aa2.5□□□□□ -2.01
RPN1YHR027C MGR2Q02889 113 aa2.5□□□□□ -2.01
RPN1YHR027C YDR102CQ03864 110 aa2.5□□□□□ -2.01
RPN1YHR027C RRS1Q08746 203 aaKnown RBP2.5□□□□□ -2.01
RPN1YHR027C YOR387CQ08910 206 aa2.5□□□□□ -2.01
RPN1YHR027C NIP7Q08962 181 aaKnown RBP2.5□□□□□ -2.01
RPN1YHR027C RRT15Q3E811 62 aa2.5□□□□□ -2.01
RPN1YHR027C YBR126W-AQ8TGU7 68 aa2.5□□□□□ -2.01
RPN1YHR027C ISF1P32488 338 aa2.5□□□□□ -2.01
RPN1YHR027C YSY6P38374 65 aa2.5□□□□□ -2.01
RPN1YHR027C YOR343CQ12484 108 aa2.5□□□□□ -2.01
RPN1YHR027C COA3Q3E7B2 85 aa2.5□□□□□ -2.01
RPN1YHR027C RPL32P38061 130 aaKnown RBP2.49□□□□□ -2.01
RPN1YHR027C YFR054CP43622 192 aa2.49□□□□□ -2.01
RPN1YHR027C NCA3P46955 337 aa2.49□□□□□ -2.01
RPN1YHR027C PIR5P46999 287 aa2.49□□□□□ -2.01
RPN1YHR027C NRM1P53718 249 aa2.49□□□□□ -2.01
RPN1YHR027C YDR209CQ03480 137 aa2.49□□□□□ -2.01
RPN1YHR027C EMC6Q12431 108 aa2.49□□□□□ -2.01
RPN1YHR027C YOR192C-CQ3E736 78 aa2.49□□□□□ -2.01
RPN1YHR027C PCL2P25693 308 aa2.49□□□□□ -2.01
RPN1YHR027C YFL019CP43576 117 aa2.49□□□□□ -2.01
RPN1YHR027C OST1P41543 476 aaKnown RBP2.49□□□□□ -2.01
RPN1YHR027C HNT2P49775 206 aa2.49□□□□□ -2.01
RPN1YHR027C YHP1Q04116 353 aa2.49□□□□□ -2.01
RPN1YHR027C SPO24Q3E752 67 aa2.49□□□□□ -2.01
RPN1YHR027C MIC10Q96VH5 97 aa2.49□□□□□ -2.01
RPN1YHR027C AGA1P32323 725 aa2.48□□□□□ -2.01
RPN1YHR027C YBL081WP38180 368 aaKnown RBP2.48□□□□□ -2.01
RPN1YHR027C CTR2P38865 189 aa2.48□□□□□ -2.01
RPN1YHR027C ECO1P43605 281 aa2.48□□□□□ -2.01
RPN1YHR027C SMD1Q02260 146 aaPredicted RBP2.48□□□□□ -2.01
RPN1YHR027C HSP12P22943 109 aaKnown RBP2.48□□□□□ -2.01
RPN1YHR027C SPT4P32914 102 aaPredicted RBP2.48□□□□□ -2.01
RPN1YHR027C MIG3P39943 394 aa2.48□□□□□ -2.01
RPN1YHR027C SPI1P40092 148 aa2.48□□□□□ -2.01
RPN1YHR027C PGU1P47180 361 aa2.48□□□□□ -2.01
RPN1YHR027C RPL30P14120 105 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 111.8 ms