RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEM1YHR004C RSF2P46974 1380 aa2.32□□□□□ -2.04
NEM1YHR004C YLR422WQ06409 1932 aa2.32□□□□□ -2.04
NEM1YHR004C MSL1P40567 111 aaPredicted RBP2.32□□□□□ -2.04
NEM1YHR004C YLR296WQ05898 108 aa2.32□□□□□ -2.04
NEM1YHR004C YDR029WQ12111 104 aa2.32□□□□□ -2.04
NEM1YHR004C LTE1P07866 1435 aa2.32□□□□□ -2.04
NEM1YHR004C FLO9P39712 1322 aa2.31□□□□□ -2.04
NEM1YHR004C YJL197C-AP0C5P0 93 aa2.31□□□□□ -2.04
NEM1YHR004C AVO2Q04749 426 aa2.31□□□□□ -2.04
NEM1YHR004C TY3B-IQ7LHG5 1498 aaKnown RBP2.3□□□□□ -2.04
NEM1YHR004C TY1B-HO13535 1793 aa2.3□□□□□ -2.04
NEM1YHR004C ECM12O13529 151 aa2.3□□□□□ -2.04
NEM1YHR004C YHR213WP0CI67 198 aa2.3□□□□□ -2.04
NEM1YHR004C ATG8P38182 117 aaRIP-Chip data2.3□□□□□ -2.04not detected
NEM1YHR004C EMC5P40540 141 aa2.3□□□□□ -2.04
NEM1YHR004C PAU12P53343 120 aa2.3□□□□□ -2.04
NEM1YHR004C MIX17Q03667 156 aa2.3□□□□□ -2.04
NEM1YHR004C VAM10Q08474 114 aa2.3□□□□□ -2.04
NEM1YHR004C PCC1Q3E833 88 aa2.3□□□□□ -2.04
NEM1YHR004C SRB6P32570 121 aa2.29□□□□□ -2.04
NEM1YHR004C YKR045CP36138 183 aa2.29□□□□□ -2.04
NEM1YHR004C SUS1Q6WNK7 96 aa2.29□□□□□ -2.04
NEM1YHR004C ROM2P51862 1356 aaKnown RBP2.28□□□□□ -2.04
NEM1YHR004C RPL40AP0CH08 128 aaKnown RBP2.28□□□□□ -2.04
NEM1YHR004C RPL40BP0CH09 128 aaKnown RBP2.28□□□□□ -2.04
NEM1YHR004C SRX1P36077 127 aa2.28□□□□□ -2.04
NEM1YHR004C NRG2P38082 220 aa2.28□□□□□ -2.04
NEM1YHR004C YHR138CP38841 114 aaPredicted RBP2.28□□□□□ -2.04
NEM1YHR004C YLR363W-AQ3E747 85 aa2.28□□□□□ -2.04
NEM1YHR004C QCR8P08525 94 aa2.27□□□□□ -2.05
NEM1YHR004C PAU19P0CE85 124 aa2.27□□□□□ -2.05
NEM1YHR004C PAU3P25610 124 aa2.27□□□□□ -2.05
NEM1YHR004C YBR027CP38220 110 aa2.27□□□□□ -2.05
NEM1YHR004C YHL005CP38752 130 aa2.27□□□□□ -2.05
NEM1YHR004C PAU2P32612 120 aa2.26□□□□□ -2.05
NEM1YHR004C YIR020CP40575 100 aa2.26□□□□□ -2.05
NEM1YHR004C DAN1P47178 298 aa2.26□□□□□ -2.05
NEM1YHR004C SED1Q01589 338 aa2.26□□□□□ -2.05
NEM1YHR004C YMR082CQ04276 118 aa2.26□□□□□ -2.05
NEM1YHR004C YLR194CQ05777 254 aa2.26□□□□□ -2.05
NEM1YHR004C RPL33AP05744 107 aaKnown RBP2.25□□□□□ -2.05
NEM1YHR004C HMRA1P0CY11 126 aa2.25□□□□□ -2.05
NEM1YHR004C PAU24P38155 120 aa2.25□□□□□ -2.05
NEM1YHR004C COX23P38824 151 aa2.25□□□□□ -2.05
NEM1YHR004C POR2P40478 281 aa2.25□□□□□ -2.05
NEM1YHR004C LST8P41318 303 aa2.25□□□□□ -2.05
NEM1YHR004C BEM2P39960 2167 aaKnown RBP2.25□□□□□ -2.05
NEM1YHR004C FAS1P07149 2051 aaKnown RBP2.25□□□□□ -2.05
NEM1YHR004C YGL014C-AP0C5N1 53 aa2.24□□□□□ -2.05
NEM1YHR004C YBR219CP38317 127 aa2.24□□□□□ -2.05
NEM1YHR004C GCV3P39726 170 aaPredicted RBP2.24□□□□□ -2.05
NEM1YHR004C IRC21Q04772 201 aa2.24□□□□□ -2.05
NEM1YHR004C TAR1Q8TGM6 124 aa2.24□□□□□ -2.05
NEM1YHR004C PAU16P35994 123 aa2.23□□□□□ -2.05
NEM1YHR004C CYB5P40312 120 aa2.23□□□□□ -2.05
NEM1YHR004C PAU15P40585 124 aa2.23□□□□□ -2.05
NEM1YHR004C RGM1Q00453 211 aa2.23□□□□□ -2.05
NEM1YHR004C YMR122CQ03879 124 aa2.23□□□□□ -2.05
NEM1YHR004C YNL146C-AQ3E7Z1 64 aa2.23□□□□□ -2.05
NEM1YHR004C YDR042CQ03205 200 aa2.22□□□□□ -2.05
NEM1YHR004C YCL048W-AQ2V2Q2 79 aa2.22□□□□□ -2.05
NEM1YHR004C RPL22AP05749 121 aaKnown RBP2.21□□□□□ -2.06
NEM1YHR004C YLR162WQ06235 118 aa2.21□□□□□ -2.06
NEM1YHR004C YLR419WQ06698 1435 aaKnown RBP2.21□□□□□ -2.06
NEM1YHR004C FPR1P20081 114 aaKnown RBP2.2□□□□□ -2.06
NEM1YHR004C RSM18P40033 138 aa2.2□□□□□ -2.06
NEM1YHR004C YMR321CQ04898 105 aa2.2□□□□□ -2.06
NEM1YHR004C COA4Q05809 96 aa2.2□□□□□ -2.06
NEM1YHR004C YEL008WP40001 126 aa2.19□□□□□ -2.06
NEM1YHR004C YHR086W-AQ3E746 53 aa2.19□□□□□ -2.06
NEM1YHR004C COA3Q3E7B2 85 aa2.19□□□□□ -2.06
NEM1YHR004C PDR10P51533 1564 aa2.19□□□□□ -2.06
NEM1YHR004C HMRA2P0CY13 119 aa2.18□□□□□ -2.06
NEM1YHR004C LSM6Q06406 86 aaKnown RBP2.18□□□□□ -2.06
NEM1YHR004C YLR285C-AQ3E771 56 aa2.18□□□□□ -2.06
NEM1YHR004C YIL163CP40448 117 aa2.17□□□□□ -2.06
NEM1YHR004C SEN15Q04675 128 aa2.17□□□□□ -2.06
NEM1YHR004C ENV10Q99382 181 aa2.17□□□□□ -2.06
NEM1YHR004C YRF1-3P0CX14 1859 aa2.17□□□□□ -2.06
NEM1YHR004C YRF1-7P0CX15 1859 aa2.17□□□□□ -2.06
NEM1YHR004C YRF1-6P53819 1859 aa2.17□□□□□ -2.06
NEM1YHR004C YSF3P0C074 85 aaPredicted RBP2.17□□□□□ -2.06
NEM1YHR004C YCR085WP25650 117 aa2.17□□□□□ -2.06
NEM1YHR004C ICS3P47034 131 aa2.17□□□□□ -2.06
NEM1YHR004C YOL118CQ08259 102 aa2.17□□□□□ -2.06
NEM1YHR004C RRT15Q3E811 62 aa2.17□□□□□ -2.06
NEM1YHR004C MHF2Q3E829 80 aa2.17□□□□□ -2.06
NEM1YHR004C YSP2Q06681 1438 aa2.16□□□□□ -2.06
NEM1YHR004C ROX3P25046 220 aa2.16□□□□□ -2.06
NEM1YHR004C RPA12P32529 125 aaKnown RBP2.16□□□□□ -2.06
NEM1YHR004C YHL037CP38733 133 aa2.16□□□□□ -2.06
NEM1YHR004C CWP2P43497 92 aa2.16□□□□□ -2.06
NEM1YHR004C YFL065CP43539 102 aa2.16□□□□□ -2.06
NEM1YHR004C PAU5P43575 122 aa2.16□□□□□ -2.06
NEM1YHR004C YJL009WP47078 108 aa2.16□□□□□ -2.06
NEM1YHR004C PRM3Q08931 133 aa2.16□□□□□ -2.06
NEM1YHR004C YGL041C-BQ3E750 60 aa2.16□□□□□ -2.06
NEM1YHR004C BNI1P41832 1953 aa2.15□□□□□ -2.07
NEM1YHR004C YCL042WP25572 119 aa2.15□□□□□ -2.07
NEM1YHR004C SNA2P56508 79 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms