RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C TY1A-MR2P0CX69 440 aa9.16□□□□□ -0.94
SHU1YHL006C ZRT1P32804 376 aa9.16□□□□□ -0.94
SHU1YHL006C SVP26P38869 228 aa9.16□□□□□ -0.94
SHU1YHL006C TY1A-JR2P47099 440 aa9.16□□□□□ -0.94
SHU1YHL006C TY1A-DR1Q03856 440 aa9.16□□□□□ -0.94
SHU1YHL006C TY1A-ML1Q04706 440 aaKnown RBP9.16□□□□□ -0.94
SHU1YHL006C TY1A-GR2Q12485 440 aa9.16□□□□□ -0.94
SHU1YHL006C NTF2P33331 125 aaKnown RBP9.15□□□□□ -0.94
SHU1YHL006C MRPS9P38120 278 aa9.15□□□□□ -0.94
SHU1YHL006C YIL024CP40543 189 aa9.15□□□□□ -0.94
SHU1YHL006C ERI1P62651 68 aaKnown RBP9.15□□□□□ -0.94
SHU1YHL006C TVP18Q04767 167 aa9.15□□□□□ -0.94
SHU1YHL006C YGL010WP25338 174 aa9.14□□□□□ -0.95
SHU1YHL006C SDH8P38345 138 aa9.14□□□□□ -0.95
SHU1YHL006C YDR115WQ04598 105 aa9.14□□□□□ -0.95
SHU1YHL006C GTO3Q04806 366 aa9.14□□□□□ -0.95
SHU1YHL006C YMR122W-AQ3E842 84 aa9.14□□□□□ -0.95
SHU1YHL006C HMRA1P0CY11 126 aa9.13□□□□□ -0.95
SHU1YHL006C PAM17P36147 197 aa9.13□□□□□ -0.95
SHU1YHL006C SNU23Q12368 194 aaPredicted RBP9.13□□□□□ -0.95
SHU1YHL006C SAL1D6W196 494 aa9.12□□□□□ -0.95
SHU1YHL006C PAU7P39545 55 aa9.12□□□□□ -0.95
SHU1YHL006C PAU5P43575 122 aa9.12□□□□□ -0.95
SHU1YHL006C RPL42AP0CX27 106 aaKnown RBP9.11□□□□□ -0.95
SHU1YHL006C RPL42BP0CX28 106 aaKnown RBP9.11□□□□□ -0.95
SHU1YHL006C FCF1Q05498 189 aaPredicted RBP9.11□□□□□ -0.95
SHU1YHL006C YNR034W-AQ3E841 98 aa9.11□□□□□ -0.95
SHU1YHL006C YPL229WQ99395 206 aa9.11□□□□□ -0.95
SHU1YHL006C HSP10P38910 106 aa9.1□□□□□ -0.95
SHU1YHL006C YMR320WQ04897 101 aa9.1□□□□□ -0.95
SHU1YHL006C ARC15P40518 154 aaRIP-Chip data9.09□□□□□ -0.95not detected
SHU1YHL006C YGR149WP48236 432 aa9.08□□□□□ -0.96
SHU1YHL006C APS2Q00381 147 aa9.08□□□□□ -0.96
SHU1YHL006C YKR032WP36127 104 aa9.07□□□□□ -0.96
SHU1YHL006C DCV1P43595 202 aa9.07□□□□□ -0.96
SHU1YHL006C ADH3P07246 375 aaKnown RBP9.06□□□□□ -0.96
SHU1YHL006C NHP6AP11632 93 aaKnown RBP9.06□□□□□ -0.96
SHU1YHL006C DAD2P36162 133 aa9.06□□□□□ -0.96
SHU1YHL006C NUP42P49686 430 aaKnown RBP9.06□□□□□ -0.96
SHU1YHL006C SDS23P53172 527 aa9.06□□□□□ -0.96
SHU1YHL006C YLR118CQ12354 227 aa9.06□□□□□ -0.96
SHU1YHL006C YOP1Q12402 180 aa9.06□□□□□ -0.96
SHU1YHL006C YPR010C-AA5Z2X5 72 aa9.05□□□□□ -0.96
SHU1YHL006C MRP49P32388 137 aa9.05□□□□□ -0.96
SHU1YHL006C POM33Q12164 279 aa9.04□□□□□ -0.96
SHU1YHL006C MRP10O75012 95 aa9.03□□□□□ -0.96
SHU1YHL006C YDR034C-AP0C289 58 aa9.03□□□□□ -0.96
SHU1YHL006C YAR023CD6VPM8 179 aa9.01□□□□□ -0.97
SHU1YHL006C RPL23AP0CX41 137 aaKnown RBP9.01□□□□□ -0.97
SHU1YHL006C RPL23BP0CX42 137 aaKnown RBP9.01□□□□□ -0.97
SHU1YHL006C PET8P38921 284 aa9.01□□□□□ -0.97
SHU1YHL006C YIL059CP40520 121 aa9.01□□□□□ -0.97
SHU1YHL006C YBR013CP38215 129 aa9□□□□□ -0.97
SHU1YHL006C VMA21P41806 77 aa9□□□□□ -0.97
SHU1YHL006C YGL088WP53151 121 aa9□□□□□ -0.97
SHU1YHL006C BET5Q03630 159 aa9□□□□□ -0.97
SHU1YHL006C YBR209WP38311 105 aa8.99□□□□□ -0.97
SHU1YHL006C ERG28P40030 148 aa8.99□□□□□ -0.97
SHU1YHL006C FSF1Q12029 327 aaKnown RBP8.99□□□□□ -0.97
SHU1YHL006C TY1A-LR4P0C2I8 440 aaKnown RBP8.98□□□□□ -0.97
SHU1YHL006C TY1A-DR6P0CX70 440 aa8.98□□□□□ -0.97
SHU1YHL006C TY1A-ER1P0CX71 440 aa8.98□□□□□ -0.97
SHU1YHL006C TY1A-LR2P0CX72 440 aa8.98□□□□□ -0.97
SHU1YHL006C TY1A-PLP0CX73 440 aa8.98□□□□□ -0.97
SHU1YHL006C TY1A-JR1P0CX74 440 aa8.98□□□□□ -0.97
SHU1YHL006C TY1A-LR3P0CX75 440 aa8.98□□□□□ -0.97
SHU1YHL006C TY1A-ML2P0CX76 440 aa8.98□□□□□ -0.97
SHU1YHL006C TY1A-GR1Q12085 440 aa8.98□□□□□ -0.97
SHU1YHL006C TY1A-PR3Q6Q5H1 440 aaKnown RBP8.98□□□□□ -0.97
SHU1YHL006C TY1A-OLQ92392 440 aaKnown RBP8.98□□□□□ -0.97
SHU1YHL006C RPL16AP26784 199 aaKnown RBP8.96□□□□□ -0.98
SHU1YHL006C ATG8P38182 117 aaRIP-Chip data8.96□□□□□ -0.98not detected
SHU1YHL006C PAU15P40585 124 aa8.96□□□□□ -0.98
SHU1YHL006C GLO1P50107 326 aa8.96□□□□□ -0.98
SHU1YHL006C YKR070WP36151 352 aaKnown RBP8.94□□□□□ -0.98
SHU1YHL006C DAN1P47178 298 aa8.93□□□□□ -0.98
SHU1YHL006C WIP1Q2V2P8 89 aa8.93□□□□□ -0.98
SHU1YHL006C YCR024C-BQ3E7Z8 88 aa8.92□□□□□ -0.98
SHU1YHL006C SEC4P07560 215 aaKnown RBP8.91□□□□□ -0.98
SHU1YHL006C AIM29P36154 155 aa8.91□□□□□ -0.98
SHU1YHL006C YER076CP40049 302 aa8.91□□□□□ -0.98
SHU1YHL006C YJR146WP47174 117 aa8.91□□□□□ -0.98
SHU1YHL006C DFM1Q12743 341 aaKnown RBP8.91□□□□□ -0.98
SHU1YHL006C CNB1P25296 175 aa8.9□□□□□ -0.98
SHU1YHL006C YBL081WP38180 368 aaKnown RBP8.9□□□□□ -0.98
SHU1YHL006C YER085CP40058 173 aa8.9□□□□□ -0.98
SHU1YHL006C ADH2P00331 348 aaKnown RBP8.89□□□□□ -0.99
SHU1YHL006C PFY1P07274 126 aa8.89□□□□□ -0.99
SHU1YHL006C YAL064WP39711 94 aa8.89□□□□□ -0.99
SHU1YHL006C SEC72P39742 193 aaKnown RBP8.88□□□□□ -0.99
SHU1YHL006C MGR2Q02889 113 aa8.88□□□□□ -0.99
SHU1YHL006C YPR014CQ6B0W2 109 aa8.87□□□□□ -0.99
SHU1YHL006C PRE1P22141 198 aaKnown RBP8.86□□□□□ -0.99
SHU1YHL006C RPC10P40422 70 aa8.86□□□□□ -0.99
SHU1YHL006C YDR029WQ12111 104 aa8.86□□□□□ -0.99
SHU1YHL006C RPS22BQ3E7Y3 130 aaKnown RBP8.86□□□□□ -0.99
SHU1YHL006C TRP1P00912 224 aa8.85□□□□□ -0.99
SHU1YHL006C AQY1P0CD91 305 aa8.85□□□□□ -0.99
SHU1YHL006C YBR219CP38317 127 aa8.85□□□□□ -0.99
SHU1YHL006C YEL008WP40001 126 aa8.85□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 131 ms