RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C RRT13P40042 185 aa2.2□□□□□ -2.06
SWC4YGR002C HUR1P45820 110 aa2.2□□□□□ -2.06
SWC4YGR002C SWT21P53873 357 aaPredicted RBP2.2□□□□□ -2.06
SWC4YGR002C RIM9Q04734 239 aa2.2□□□□□ -2.06
SWC4YGR002C AVO2Q04749 426 aa2.2□□□□□ -2.06
SWC4YGR002C ANT1Q06497 328 aa2.2□□□□□ -2.06
SWC4YGR002C MSA1Q08471 629 aa2.2□□□□□ -2.06
SWC4YGR002C ODC2Q99297 307 aa2.2□□□□□ -2.06
SWC4YGR002C DDR48P18899 430 aaKnown RBP2.19□□□□□ -2.06
SWC4YGR002C NHP2P32495 156 aaPredicted RBP2.19□□□□□ -2.06
SWC4YGR002C GPX1P36014 167 aa2.19□□□□□ -2.06
SWC4YGR002C YKL044WP36092 106 aa2.19□□□□□ -2.06
SWC4YGR002C YBL081WP38180 368 aaKnown RBP2.19□□□□□ -2.06
SWC4YGR002C YHL042WP38729 150 aa2.19□□□□□ -2.06
SWC4YGR002C YER135CP40082 130 aa2.19□□□□□ -2.06
SWC4YGR002C YFL019CP43576 117 aa2.19□□□□□ -2.06
SWC4YGR002C PIR5P46999 287 aa2.19□□□□□ -2.06
SWC4YGR002C YNR064CP53750 290 aa2.19□□□□□ -2.06
SWC4YGR002C YMR295CQ03559 197 aa2.19□□□□□ -2.06
SWC4YGR002C YLR296WQ05898 108 aa2.19□□□□□ -2.06
SWC4YGR002C NMA1Q06178 401 aaKnown RBP2.19□□□□□ -2.06
SWC4YGR002C SMT3Q12306 101 aaKnown RBP2.19□□□□□ -2.06
SWC4YGR002C YFL041W-AQ3E817 63 aa2.19□□□□□ -2.06
SWC4YGR002C YFR032C-BQ8TGU2 87 aa2.19□□□□□ -2.06
SWC4YGR002C YPL229WQ99395 206 aa2.19□□□□□ -2.06
SWC4YGR002C RPA190P10964 1664 aaKnown RBP2.19□□□□□ -2.06
SWC4YGR002C YOR093CQ12275 1648 aa2.18□□□□□ -2.06
SWC4YGR002C YAR023CD6VPM8 179 aa2.18□□□□□ -2.06
SWC4YGR002C SPO73P40031 143 aa2.18□□□□□ -2.06
SWC4YGR002C YNL200CP40165 246 aaKnown RBP2.18□□□□□ -2.06
SWC4YGR002C LIP1Q03579 150 aa2.18□□□□□ -2.06
SWC4YGR002C YDR102CQ03864 110 aa2.18□□□□□ -2.06
SWC4YGR002C YHP1Q04116 353 aa2.18□□□□□ -2.06
SWC4YGR002C API2Q04413 109 aa2.18□□□□□ -2.06
SWC4YGR002C YOL029CQ08187 201 aa2.18□□□□□ -2.06
SWC4YGR002C YPL278CQ08990 100 aa2.18□□□□□ -2.06
SWC4YGR002C YPR145C-AQ2V2P0 78 aa2.18□□□□□ -2.06
SWC4YGR002C FLO11P08640 1367 aa2.18□□□□□ -2.06
SWC4YGR002C RPL22AP05749 121 aaKnown RBP2.17□□□□□ -2.06
SWC4YGR002C RPL40AP0CH08 128 aaKnown RBP2.17□□□□□ -2.06
SWC4YGR002C RPL40BP0CH09 128 aaKnown RBP2.17□□□□□ -2.06
SWC4YGR002C MRP17P28778 131 aa2.17□□□□□ -2.06
SWC4YGR002C RPB7P34087 171 aa2.17□□□□□ -2.06
SWC4YGR002C UMP1P38293 148 aa2.17□□□□□ -2.06
SWC4YGR002C YBR292CP38357 123 aa2.17□□□□□ -2.06
SWC4YGR002C FYV4P38783 130 aaPredicted RBP2.17□□□□□ -2.06
SWC4YGR002C ASP1P38986 381 aaPredicted RBP2.17□□□□□ -2.06
SWC4YGR002C YNL198CP40166 100 aa2.17□□□□□ -2.06
SWC4YGR002C PEP8P40335 379 aa2.17□□□□□ -2.06
SWC4YGR002C ARC15P40518 154 aaRIP-Chip data2.17□□□□□ -2.06not detected
SWC4YGR002C YDR042CQ03205 200 aa2.17□□□□□ -2.06
SWC4YGR002C EMI1Q04406 187 aa2.17□□□□□ -2.06
SWC4YGR002C YOL014WQ08110 124 aa2.17□□□□□ -2.06
SWC4YGR002C HRT1Q08273 121 aa2.17□□□□□ -2.06
SWC4YGR002C NIP7Q08962 181 aaKnown RBP2.17□□□□□ -2.06
SWC4YGR002C YKL023C-AQ2V2P3 75 aa2.17□□□□□ -2.06
SWC4YGR002C MHF2Q3E829 80 aa2.17□□□□□ -2.06
SWC4YGR002C YAL067W-AQ8TGK6 75 aa2.17□□□□□ -2.06
SWC4YGR002C YOL085CQ99345 113 aa2.17□□□□□ -2.06
SWC4YGR002C YBT1P32386 1661 aa2.17□□□□□ -2.06
SWC4YGR002C PAU16P35994 123 aa2.17□□□□□ -2.06
SWC4YGR002C YAL064WP39711 94 aa2.17□□□□□ -2.06
SWC4YGR002C YEL028WP39989 153 aa2.17□□□□□ -2.06
SWC4YGR002C RSM18P40033 138 aa2.17□□□□□ -2.06
SWC4YGR002C YFR035CP43608 114 aa2.17□□□□□ -2.06
SWC4YGR002C MIC27P50945 234 aa2.17□□□□□ -2.06
SWC4YGR002C BOL2P53082 120 aa2.17□□□□□ -2.06
SWC4YGR002C COX12Q01519 83 aa2.17□□□□□ -2.06
SWC4YGR002C ATG41Q12048 136 aa2.17□□□□□ -2.06
SWC4YGR002C YDL157CQ12082 118 aa2.17□□□□□ -2.06
SWC4YGR002C POC4Q12245 148 aaPredicted RBP2.17□□□□□ -2.06
SWC4YGR002C YPR011CQ12251 326 aa2.17□□□□□ -2.06
SWC4YGR002C YDR119W-AQ2V2P9 66 aa2.17□□□□□ -2.06
SWC4YGR002C YPL038W-AQ3E7B4 63 aa2.17□□□□□ -2.06
SWC4YGR002C MIC10Q96VH5 97 aa2.17□□□□□ -2.06
SWC4YGR002C MAK31P23059 88 aa2.16□□□□□ -2.06
SWC4YGR002C FZF1P32805 299 aa2.16□□□□□ -2.06
SWC4YGR002C ZRT3P34240 503 aa2.16□□□□□ -2.06
SWC4YGR002C YHL005CP38752 130 aa2.16□□□□□ -2.06
SWC4YGR002C YEL073CP39974 107 aa2.16□□□□□ -2.06
SWC4YGR002C VTC1P40046 129 aaRIP-Chip data2.16□□□□□ -2.06not detected
SWC4YGR002C YOR105WQ08504 108 aa2.16□□□□□ -2.06
SWC4YGR002C YDR381C-AQ3E6R5 114 aa2.16□□□□□ -2.06
SWC4YGR002C YOR376W-AQ3E805 51 aa2.16□□□□□ -2.06
SWC4YGR002C SNF2P22082 1703 aa2.15□□□□□ -2.07
SWC4YGR002C YLR156WP0CE96 114 aa2.15□□□□□ -2.07
SWC4YGR002C YLR159WP0CE97 114 aa2.15□□□□□ -2.07
SWC4YGR002C YLR161WP0CE98 114 aa2.15□□□□□ -2.07
SWC4YGR002C YKR045CP36138 183 aa2.15□□□□□ -2.07
SWC4YGR002C YBR209WP38311 105 aa2.15□□□□□ -2.07
SWC4YGR002C YIL054WP40524 105 aa2.15□□□□□ -2.07
SWC4YGR002C PAU5P43575 122 aa2.15□□□□□ -2.07
SWC4YGR002C RPL22BP56628 122 aaKnown RBP2.15□□□□□ -2.07
SWC4YGR002C MET31Q03081 177 aa2.15□□□□□ -2.07
SWC4YGR002C YMR175W-AQ3E766 64 aa2.15□□□□□ -2.07
SWC4YGR002C RIM15P43565 1770 aa2.14□□□□□ -2.07
SWC4YGR002C ATP15P21306 62 aa2.14□□□□□ -2.07
SWC4YGR002C RPB9P27999 122 aa2.14□□□□□ -2.07
SWC4YGR002C HSP10P38910 106 aa2.14□□□□□ -2.07
SWC4YGR002C TVP23P38962 199 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms