RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W UPS3Q04006 179 aa2.93□□□□□ -1.94
PTR3YFR029W ATG40Q99325 256 aa2.93□□□□□ -1.94
PTR3YFR029W YBT1P32386 1661 aa2.93□□□□□ -1.94
PTR3YFR029W PEP8P40335 379 aa2.93□□□□□ -1.94
PTR3YFR029W EMC5P40540 141 aa2.93□□□□□ -1.94
PTR3YFR029W MSL1P40567 111 aaPredicted RBP2.93□□□□□ -1.94
PTR3YFR029W BOL2P53082 120 aa2.93□□□□□ -1.94
PTR3YFR029W YPL067CQ02754 198 aa2.93□□□□□ -1.94
PTR3YFR029W RPO21P04050 1733 aaKnown RBP2.93□□□□□ -1.94
PTR3YFR029W MDM35O60200 86 aa2.92□□□□□ -1.94
PTR3YFR029W PAU2P32612 120 aa2.92□□□□□ -1.94
PTR3YFR029W TIR3P40552 269 aa2.92□□□□□ -1.94
PTR3YFR029W PIR1Q03178 341 aa2.92□□□□□ -1.94
PTR3YFR029W RAF1Q06891 181 aa2.92□□□□□ -1.94
PTR3YFR029W ARO1P08566 1588 aaKnown RBP2.92□□□□□ -1.94
PTR3YFR029W IRC20Q06554 1556 aa2.92□□□□□ -1.94
PTR3YFR029W NTE1Q04958 1679 aa2.92□□□□□ -1.94
PTR3YFR029W IGO1P53897 168 aa2.92□□□□□ -1.94
PTR3YFR029W SML1Q04964 104 aa2.92□□□□□ -1.94
PTR3YFR029W YPR013CQ12145 317 aa2.92□□□□□ -1.94
PTR3YFR029W SPO14P36126 1683 aa2.91□□□□□ -1.94
PTR3YFR029W YLR236CA0A023PZG4 107 aa2.91□□□□□ -1.94
PTR3YFR029W YER084WP40057 128 aa2.91□□□□□ -1.94
PTR3YFR029W RSM19P53733 91 aaPredicted RBP2.91□□□□□ -1.94
PTR3YFR029W YPR195CQ06594 109 aa2.91□□□□□ -1.94
PTR3YFR029W YOS1Q3E834 85 aa2.91□□□□□ -1.94
PTR3YFR029W ECM12O13529 151 aa2.9□□□□□ -1.94
PTR3YFR029W RPS23AP0CX29 145 aaKnown RBP2.9□□□□□ -1.94
PTR3YFR029W RPS23BP0CX30 145 aa2.9□□□□□ -1.94
PTR3YFR029W MRPL44P19956 98 aa2.9□□□□□ -1.94
PTR3YFR029W YER187WP40102 141 aa2.9□□□□□ -1.94
PTR3YFR029W MPC1P53157 130 aaKnown RBP2.9□□□□□ -1.94
PTR3YFR029W YLR296WQ05898 108 aa2.9□□□□□ -1.94
PTR3YFR029W FMT1P32785 401 aa2.9□□□□□ -1.95
PTR3YFR029W PAU24P38155 120 aa2.9□□□□□ -1.95
PTR3YFR029W CWP2P43497 92 aa2.9□□□□□ -1.95
PTR3YFR029W TY1B-NL2Q99337 1749 aaKnown RBP2.89□□□□□ -1.95
PTR3YFR029W SRB8P25648 1427 aa2.89□□□□□ -1.95
PTR3YFR029W RPL33BP41056 107 aaKnown RBP2.89□□□□□ -1.95
PTR3YFR029W YGL260WP53056 76 aa2.89□□□□□ -1.95
PTR3YFR029W ATP19P81451 68 aa2.89□□□□□ -1.95
PTR3YFR029W ELP6Q04868 273 aa2.89□□□□□ -1.95
PTR3YFR029W CMC4Q3E7A9 73 aa2.89□□□□□ -1.95
PTR3YFR029W COA6Q3E846 104 aa2.89□□□□□ -1.95
PTR3YFR029W PAU21P0CE86 164 aa2.88□□□□□ -1.95
PTR3YFR029W PAU22P0CE87 164 aa2.88□□□□□ -1.95
PTR3YFR029W UTR5P32630 166 aa2.88□□□□□ -1.95
PTR3YFR029W LSM2P38203 95 aaKnown RBP2.88□□□□□ -1.95
PTR3YFR029W YGR269WP40326 108 aa2.88□□□□□ -1.95
PTR3YFR029W NMA1Q06178 401 aaKnown RBP2.88□□□□□ -1.95
PTR3YFR029W FPR1P20081 114 aaKnown RBP2.87□□□□□ -1.95
PTR3YFR029W YKR045CP36138 183 aa2.87□□□□□ -1.95
PTR3YFR029W YHL018WP38744 120 aaPredicted RBP2.87□□□□□ -1.95
PTR3YFR029W YFL051CP43552 160 aa2.87□□□□□ -1.95
PTR3YFR029W DCV1P43595 202 aa2.87□□□□□ -1.95
PTR3YFR029W HUR1P45820 110 aa2.87□□□□□ -1.95
PTR3YFR029W YML079WQ03629 201 aa2.87□□□□□ -1.95
PTR3YFR029W YPL261CQ08976 102 aa2.87□□□□□ -1.95
PTR3YFR029W YRF1-2P40105 1681 aa2.87□□□□□ -1.95
PTR3YFR029W PDR12Q02785 1511 aa2.87□□□□□ -1.95
PTR3YFR029W IQG1Q12280 1495 aa2.87□□□□□ -1.95
PTR3YFR029W RTC6O14464 93 aa2.86□□□□□ -1.95
PTR3YFR029W RPS19AP07280 144 aaKnown RBP2.86□□□□□ -1.95
PTR3YFR029W RPS19BP07281 144 aaPredicted RBP2.86□□□□□ -1.95
PTR3YFR029W BRP1P53194 125 aa2.86□□□□□ -1.95
PTR3YFR029W YIL014C-AQ02598 104 aa2.86□□□□□ -1.95
PTR3YFR029W CYB5P40312 120 aa2.86□□□□□ -1.95
PTR3YFR029W YGL149WP53116 101 aa2.86□□□□□ -1.95
PTR3YFR029W YDR042CQ03205 200 aa2.86□□□□□ -1.95
PTR3YFR029W MIX14Q04341 121 aa2.86□□□□□ -1.95
PTR3YFR029W PAU19P0CE85 124 aa2.85□□□□□ -1.95
PTR3YFR029W HSP26P15992 214 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
PTR3YFR029W PAU3P25610 124 aa2.85□□□□□ -1.95
PTR3YFR029W YBR013CP38215 129 aa2.85□□□□□ -1.95
PTR3YFR029W YFL065CP43539 102 aa2.85□□□□□ -1.95
PTR3YFR029W FIT2Q08906 153 aa2.85□□□□□ -1.95
PTR3YFR029W YPR203WQ08994 102 aa2.85□□□□□ -1.95
PTR3YFR029W POC4Q12245 148 aaPredicted RBP2.85□□□□□ -1.95
PTR3YFR029W COX8P04039 78 aa2.85□□□□□ -1.95
PTR3YFR029W FUN14P18411 198 aa2.85□□□□□ -1.95
PTR3YFR029W HSP10P38910 106 aa2.85□□□□□ -1.95
PTR3YFR029W YPR153WQ06537 140 aa2.85□□□□□ -1.95
PTR3YFR029W YIR020CP40575 100 aa2.84□□□□□ -1.95
PTR3YFR029W YJR146WP47174 117 aa2.84□□□□□ -1.95
PTR3YFR029W DAD1Q12248 94 aa2.84□□□□□ -1.95
PTR3YFR029W MMS1Q06211 1407 aa2.83□□□□□ -1.96
PTR3YFR029W SEC11P15367 167 aa2.83□□□□□ -1.96
PTR3YFR029W UTH1P36135 365 aa2.83□□□□□ -1.96
PTR3YFR029W CIS3P47001 227 aa2.83□□□□□ -1.96
PTR3YFR029W DAD4P69851 72 aa2.83□□□□□ -1.96
PTR3YFR029W AVO2Q04749 426 aa2.83□□□□□ -1.96
PTR3YFR029W TMC1Q08422 150 aaPredicted RBP2.83□□□□□ -1.96
PTR3YFR029W YHR213WP0CI67 198 aa2.83□□□□□ -1.96
PTR3YFR029W DAN1P47178 298 aa2.83□□□□□ -1.96
PTR3YFR029W YHR213W-AQ8TGT4 77 aa2.83□□□□□ -1.96
PTR3YFR029W OST5Q92316 86 aa2.83□□□□□ -1.96
PTR3YFR029W PDR5P33302 1511 aaKnown RBP2.83□□□□□ -1.96
PTR3YFR029W LAA1P39526 2014 aa2.82□□□□□ -1.96
PTR3YFR029W HSP150P32478 413 aa2.82□□□□□ -1.96
PTR3YFR029W PCC1Q3E833 88 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms