RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	YBR200W-A	Q3E755	54 aa		5.45	□□□□□ -1.54
SKP1	YDR328C	CYC7	P00045	113 aa		5.44	□□□□□ -1.54
SKP1	YDR328C	RPL2A	P0CX45	254 aa	Known RBP	5.44	□□□□□ -1.54
SKP1	YDR328C	RPL2B	P0CX46	254 aa	Known RBP	5.44	□□□□□ -1.54
SKP1	YDR328C	RPS11A	P0CX47	156 aa	Known RBP	5.44	□□□□□ -1.54
SKP1	YDR328C	RPS11B	P0CX48	156 aa	Known RBP	5.44	□□□□□ -1.54
SKP1	YDR328C	BRP1	P53194	125 aa		5.44	□□□□□ -1.54
SKP1	YDR328C	YGR017W	P53210	297 aa		5.44	□□□□□ -1.54
SKP1	YDR328C	YDR366C	P87287	132 aa		5.44	□□□□□ -1.54
SKP1	YDR328C	YLR281C	Q05863	155 aa		5.44	□□□□□ -1.54
SKP1	YDR328C	MED7	Q08278	222 aa		5.44	□□□□□ -1.54
SKP1	YDR328C	MLF3	P32047	452 aa		5.43	□□□□□ -1.54
SKP1	YDR328C	VHS2	P40463	436 aa		5.43	□□□□□ -1.54
SKP1	YDR328C	CIN5	P40917	295 aa		5.43	□□□□□ -1.54
SKP1	YDR328C	COX12	Q01519	83 aa		5.43	□□□□□ -1.54
SKP1	YDR328C	CUE4	Q04201	117 aa	Predicted RBP	5.43	□□□□□ -1.54
SKP1	YDR328C	MSC3	Q05812	728 aa		5.43	□□□□□ -1.54
SKP1	YDR328C	Q0255	P03881	472 aa		5.42	□□□□□ -1.54
SKP1	YDR328C	RPL16B	P26785	198 aa	Known RBP	5.42	□□□□□ -1.54
SKP1	YDR328C	YKR032W	P36127	104 aa		5.42	□□□□□ -1.54
SKP1	YDR328C	DUO1	P53168	247 aa	Known RBP	5.42	□□□□□ -1.54
SKP1	YDR328C	TMA17	Q12513	150 aa		5.42	□□□□□ -1.54
SKP1	YDR328C	FRS1	P15624	595 aa	Known RBP	5.41	□□□□□ -1.54
SKP1	YDR328C	SSS1	P35179	80 aa		5.41	□□□□□ -1.54
SKP1	YDR328C	ELF1	P36053	145 aa		5.41	□□□□□ -1.54
SKP1	YDR328C	RRT13	P40042	185 aa		5.41	□□□□□ -1.54
SKP1	YDR328C	YLR122C	Q12312	125 aa		5.41	□□□□□ -1.54
SKP1	YDR328C	YPR053C	Q6Q5F3	151 aa		5.41	□□□□□ -1.54
SKP1	YDR328C	NRG2	P38082	220 aa		5.4	□□□□□ -1.54
SKP1	YDR328C	PET8	P38921	284 aa		5.4	□□□□□ -1.54
SKP1	YDR328C	YCH1	P42937	148 aa		5.4	□□□□□ -1.54
SKP1	YDR328C	YGL118C	P53132	145 aa		5.4	□□□□□ -1.54
SKP1	YDR328C	AIM34	Q03673	198 aa		5.4	□□□□□ -1.54
SKP1	YDR328C	WIP1	Q2V2P8	89 aa		5.4	□□□□□ -1.54
SKP1	YDR328C	OST3	P48439	350 aa		5.39	□□□□□ -1.55
SKP1	YDR328C	SCM4	P32564	187 aa		5.38	□□□□□ -1.55
SKP1	YDR328C	GSP1	P32835	219 aa	Known RBP	5.38	□□□□□ -1.55
SKP1	YDR328C	GSP2	P32836	220 aa	Known RBP	5.38	□□□□□ -1.55
SKP1	YDR328C	YER134C	P40081	178 aa		5.38	□□□□□ -1.55
SKP1	YDR328C	YNL200C	P40165	246 aa	Known RBP	5.38	□□□□□ -1.55
SKP1	YDR328C	ERV14	P53173	138 aa		5.38	□□□□□ -1.55
SKP1	YDR328C	MGR2	Q02889	113 aa		5.38	□□□□□ -1.55
SKP1	YDR328C	TVP18	Q04767	167 aa		5.38	□□□□□ -1.55
SKP1	YDR328C	RPL42A	P0CX27	106 aa	Known RBP	5.37	□□□□□ -1.55
SKP1	YDR328C	RPL42B	P0CX28	106 aa	Known RBP	5.37	□□□□□ -1.55
SKP1	YDR328C	AUA1	P32450	94 aa		5.37	□□□□□ -1.55
SKP1	YDR328C	KTI12	P34253	313 aa	Known RBP	5.37	□□□□□ -1.55
SKP1	YDR328C	TEM1	P38987	245 aa		5.37	□□□□□ -1.55
SKP1	YDR328C	SEC72	P39742	193 aa	Known RBP	5.37	□□□□□ -1.55
SKP1	YDR328C	YIL014C-A	Q02598	104 aa		5.37	□□□□□ -1.55
SKP1	YDR328C	SEN15	Q04675	128 aa		5.37	□□□□□ -1.55
SKP1	YDR328C	YCR023C	P25351	611 aa		5.36	□□□□□ -1.55
SKP1	YDR328C	YPS5	P53057	165 aa		5.36	□□□□□ -1.55
SKP1	YDR328C	YLR042C	Q07990	161 aa		5.36	□□□□□ -1.55
SKP1	YDR328C	VAM10	Q08474	114 aa		5.36	□□□□□ -1.55
SKP1	YDR328C	ERG27	Q12452	347 aa	Known RBP	5.36	□□□□□ -1.55
SKP1	YDR328C	SAL1	D6W196	494 aa		5.35	□□□□□ -1.55
SKP1	YDR328C	PFY1	P07274	126 aa		5.35	□□□□□ -1.55
SKP1	YDR328C	MRPL44	P19956	98 aa		5.35	□□□□□ -1.55
SKP1	YDR328C	YCR001W	P25347	104 aa		5.35	□□□□□ -1.55
SKP1	YDR328C	CDC40	P40968	455 aa	Predicted RBP	5.35	□□□□□ -1.55
SKP1	YDR328C	RDS3	Q06835	107 aa	Predicted RBP	5.35	□□□□□ -1.55
SKP1	YDR328C	COA6	Q3E846	104 aa		5.35	□□□□□ -1.55
SKP1	YDR328C	YIL134C-A	Q45U18	67 aa		5.35	□□□□□ -1.55
SKP1	YDR328C	YBR126W-A	Q8TGU7	68 aa		5.35	□□□□□ -1.55
SKP1	YDR328C	YER076C	P40049	302 aa		5.34	□□□□□ -1.55
SKP1	YDR328C	YJL028W	P47062	111 aa		5.34	□□□□□ -1.55
SKP1	YDR328C	SCW10	Q04951	389 aa		5.34	□□□□□ -1.55
SKP1	YDR328C	FCF1	Q05498	189 aa	Predicted RBP	5.34	□□□□□ -1.55
SKP1	YDR328C	YCR075W-A	Q3E830	75 aa		5.34	□□□□□ -1.55
SKP1	YDR328C	KRE9	P39005	276 aa		5.33	□□□□□ -1.56
SKP1	YDR328C	ATP23	P53722	227 aa		5.33	□□□□□ -1.56
SKP1	YDR328C	CWC27	Q02770	301 aa		5.33	□□□□□ -1.56
SKP1	YDR328C	RUB1	Q03919	77 aa		5.33	□□□□□ -1.56
SKP1	YDR328C	YPR014C	Q6B0W2	109 aa		5.33	□□□□□ -1.56
SKP1	YDR328C	AQY1	P0CD91	305 aa		5.32	□□□□□ -1.56
SKP1	YDR328C	PRE1	P22141	198 aa	Known RBP	5.32	□□□□□ -1.56
SKP1	YDR328C	YKR070W	P36151	352 aa	Known RBP	5.32	□□□□□ -1.56
SKP1	YDR328C	MRPL11	P36521	249 aa	Predicted RBP	5.32	□□□□□ -1.56
SKP1	YDR328C	YNL217W	P40152	326 aa		5.32	□□□□□ -1.56
SKP1	YDR328C	DCV1	P43595	202 aa		5.32	□□□□□ -1.56
SKP1	YDR328C	TOS6	P48560	102 aa		5.32	□□□□□ -1.56
SKP1	YDR328C	GLO1	P50107	326 aa		5.32	□□□□□ -1.56
SKP1	YDR328C	YDR042C	Q03205	200 aa		5.32	□□□□□ -1.56
SKP1	YDR328C	YGR240C-A	Q3E786	66 aa		5.32	□□□□□ -1.56
SKP1	YDR328C	PAU16	P35994	123 aa		5.31	□□□□□ -1.56
SKP1	YDR328C	POP3	P53833	195 aa	Predicted RBP	5.31	□□□□□ -1.56
SKP1	YDR328C	SGF11	Q03067	99 aa		5.31	□□□□□ -1.56
SKP1	YDR328C	DGA1	Q08650	418 aa		5.31	□□□□□ -1.56
SKP1	YDR328C	HTL1	Q9URQ5	78 aa		5.31	□□□□□ -1.56
SKP1	YDR328C	UBC5	P15732	148 aa		5.3	□□□□□ -1.56
SKP1	YDR328C	PCL2	P25693	308 aa		5.29	□□□□□ -1.56
SKP1	YDR328C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	5.29	□□□□□ -1.56	not detected
SKP1	YDR328C	UIP3	P39547	235 aa		5.29	□□□□□ -1.56
SKP1	YDR328C	DPP1	Q05521	289 aa		5.29	□□□□□ -1.56
SKP1	YDR328C	CNL1	Q06333	122 aa		5.29	□□□□□ -1.56
SKP1	YDR328C	RPL27B	P0C2H7	136 aa	Known RBP	5.28	□□□□□ -1.56
SKP1	YDR328C	YLR112W	Q12130	139 aa		5.28	□□□□□ -1.56
SKP1	YDR328C	FYV7	Q12247	151 aa		5.28	□□□□□ -1.56
SKP1	YDR328C	AIM29	P36154	155 aa		5.27	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 82.5 ms