RNA–Protein interactions for RNA: YDR178W

SDH4, Transcript of Membrane anchor subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SDH4, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH4YDR178W VAM10Q08474 114 aa4.57□□□□□ -1.68
SDH4YDR178W RPL27AP0C2H6 136 aaKnown RBP4.56□□□□□ -1.68
SDH4YDR178W RPL23AP0CX41 137 aaKnown RBP4.56□□□□□ -1.68
SDH4YDR178W RPL23BP0CX42 137 aaKnown RBP4.56□□□□□ -1.68
SDH4YDR178W YKR032WP36127 104 aa4.56□□□□□ -1.68
SDH4YDR178W YHR140WP38842 239 aa4.56□□□□□ -1.68
SDH4YDR178W PAU7P39545 55 aa4.56□□□□□ -1.68
SDH4YDR178W YPS5P53057 165 aa4.56□□□□□ -1.68
SDH4YDR178W AIM34Q03673 198 aa4.56□□□□□ -1.68
SDH4YDR178W ZEO1Q08245 113 aa4.56□□□□□ -1.68
SDH4YDR178W MET32Q12041 191 aa4.56□□□□□ -1.68
SDH4YDR178W SEC4P07560 215 aaKnown RBP4.55□□□□□ -1.68
SDH4YDR178W YCR023CP25351 611 aa4.55□□□□□ -1.68
SDH4YDR178W PET8P38921 284 aa4.55□□□□□ -1.68
SDH4YDR178W IRC22P40006 225 aa4.55□□□□□ -1.68
SDH4YDR178W GTO3Q04806 366 aa4.55□□□□□ -1.68
SDH4YDR178W FSF1Q12029 327 aaKnown RBP4.55□□□□□ -1.68
SDH4YDR178W ATP16Q12165 160 aa4.55□□□□□ -1.68
SDH4YDR178W KRE9P39005 276 aa4.54□□□□□ -1.68
SDH4YDR178W YCH1P42937 148 aa4.54□□□□□ -1.68
SDH4YDR178W YGR149WP48236 432 aa4.54□□□□□ -1.68
SDH4YDR178W DXO1Q06349 442 aa4.54□□□□□ -1.68
SDH4YDR178W YLR042CQ07990 161 aa4.54□□□□□ -1.68
SDH4YDR178W TMA17Q12513 150 aa4.54□□□□□ -1.68
SDH4YDR178W FRS1P15624 595 aaKnown RBP4.53□□□□□ -1.68
SDH4YDR178W ATP23P53722 227 aa4.53□□□□□ -1.68
SDH4YDR178W CYT2Q00873 224 aa4.53□□□□□ -1.68
SDH4YDR178W SGF11Q03067 99 aa4.53□□□□□ -1.68
SDH4YDR178W RPS22BQ3E7Y3 130 aaKnown RBP4.53□□□□□ -1.68
SDH4YDR178W MRPL33P20084 86 aa4.52□□□□□ -1.69
SDH4YDR178W MRPL28P36527 147 aa4.52□□□□□ -1.69
SDH4YDR178W SUR2P38992 349 aa4.52□□□□□ -1.69
SDH4YDR178W YNL217WP40152 326 aa4.52□□□□□ -1.69
SDH4YDR178W HAL1Q01766 294 aa4.52□□□□□ -1.69
SDH4YDR178W POM33Q12164 279 aa4.52□□□□□ -1.69
SDH4YDR178W RPS8AP0CX39 200 aaKnown RBP4.51□□□□□ -1.69
SDH4YDR178W RPS8BP0CX40 200 aaKnown RBP4.51□□□□□ -1.69
SDH4YDR178W ELF1P36053 145 aa4.51□□□□□ -1.69
SDH4YDR178W YNL200CP40165 246 aaKnown RBP4.51□□□□□ -1.69
SDH4YDR178W NUP42P49686 430 aaKnown RBP4.51□□□□□ -1.69
SDH4YDR178W ARL3Q02804 198 aa4.51□□□□□ -1.69
SDH4YDR178W YCR075W-AQ3E830 75 aa4.51□□□□□ -1.69
SDH4YDR178W KTI12P34253 313 aaKnown RBP4.5□□□□□ -1.69
SDH4YDR178W DGA1Q08650 418 aa4.5□□□□□ -1.69
SDH4YDR178W YGR240C-AQ3E786 66 aa4.5□□□□□ -1.69
SDH4YDR178W YBR126W-AQ8TGU7 68 aa4.5□□□□□ -1.69
SDH4YDR178W GSP1P32835 219 aaKnown RBP4.49□□□□□ -1.69
SDH4YDR178W GSP2P32836 220 aaKnown RBP4.49□□□□□ -1.69
SDH4YDR178W YPT53P36019 220 aa4.49□□□□□ -1.69
SDH4YDR178W YIL014C-AQ02598 104 aa4.49□□□□□ -1.69
SDH4YDR178W TVP18Q04767 167 aa4.49□□□□□ -1.69
SDH4YDR178W RPL42AP0CX27 106 aaKnown RBP4.48□□□□□ -1.69
SDH4YDR178W RPL42BP0CX28 106 aaKnown RBP4.48□□□□□ -1.69
SDH4YDR178W MGR2Q02889 113 aa4.48□□□□□ -1.69
SDH4YDR178W WIP1Q2V2P8 89 aa4.48□□□□□ -1.69
SDH4YDR178W SAL1D6W196 494 aa4.47□□□□□ -1.69
SDH4YDR178W UBC5P15732 148 aa4.47□□□□□ -1.69
SDH4YDR178W PRE1P22141 198 aaKnown RBP4.47□□□□□ -1.69
SDH4YDR178W YER076CP40049 302 aa4.47□□□□□ -1.69
SDH4YDR178W CDC40P40968 455 aaPredicted RBP4.47□□□□□ -1.69
SDH4YDR178W DCV1P43595 202 aa4.47□□□□□ -1.69
SDH4YDR178W PFY1P07274 126 aa4.46□□□□□ -1.7
SDH4YDR178W YER134CP40081 178 aa4.46□□□□□ -1.7
SDH4YDR178W RPR2P40571 144 aa4.46□□□□□ -1.7
SDH4YDR178W CRC1Q12289 327 aa4.46□□□□□ -1.7
SDH4YDR178W YPR014CQ6B0W2 109 aa4.46□□□□□ -1.7
SDH4YDR178W AQY1P0CD91 305 aa4.45□□□□□ -1.7
SDH4YDR178W TEM1P38987 245 aa4.45□□□□□ -1.7
SDH4YDR178W FCF1Q05498 189 aaPredicted RBP4.45□□□□□ -1.7
SDH4YDR178W YLL066W-BQ8TGJ7 56 aa4.45□□□□□ -1.7
SDH4YDR178W RPL16AP26784 199 aaKnown RBP4.44□□□□□ -1.7
SDH4YDR178W SEC72P39742 193 aaKnown RBP4.44□□□□□ -1.7
SDH4YDR178W YJL028WP47062 111 aa4.44□□□□□ -1.7
SDH4YDR178W GLO1P50107 326 aa4.44□□□□□ -1.7
SDH4YDR178W YGL118CP53132 145 aa4.44□□□□□ -1.7
SDH4YDR178W SEN15Q04675 128 aa4.44□□□□□ -1.7
SDH4YDR178W DPP1Q05521 289 aa4.44□□□□□ -1.7
SDH4YDR178W LSO2Q3E772 92 aaKnown RBP4.44□□□□□ -1.7
SDH4YDR178W YKR070WP36151 352 aaKnown RBP4.43□□□□□ -1.7
SDH4YDR178W YJR146WP47174 117 aa4.43□□□□□ -1.7
SDH4YDR178W OST3P48439 350 aa4.43□□□□□ -1.7
SDH4YDR178W TOS6P48560 102 aa4.43□□□□□ -1.7
SDH4YDR178W PMP3P87284 55 aa4.43□□□□□ -1.7
SDH4YDR178W MED7Q08278 222 aa4.43□□□□□ -1.7
SDH4YDR178W PCL2P25693 308 aa4.42□□□□□ -1.7
SDH4YDR178W MRP49P32388 137 aa4.42□□□□□ -1.7
SDH4YDR178W CUE4Q04201 117 aaPredicted RBP4.42□□□□□ -1.7
SDH4YDR178W ERG27Q12452 347 aaKnown RBP4.42□□□□□ -1.7
SDH4YDR178W SSS1P35179 80 aa4.41□□□□□ -1.7
SDH4YDR178W ARC15P40518 154 aaRIP-Chip data4.41□□□□□ -1.7not detected
SDH4YDR178W YGL088WP53151 121 aa4.41□□□□□ -1.7
SDH4YDR178W YDR042CQ03205 200 aa4.41□□□□□ -1.7
SDH4YDR178W YMR122W-AQ3E842 84 aa4.41□□□□□ -1.7
SDH4YDR178W RPL33AP05744 107 aaKnown RBP4.4□□□□□ -1.71
SDH4YDR178W RPL33BP41056 107 aaKnown RBP4.4□□□□□ -1.71
SDH4YDR178W POP3P53833 195 aaPredicted RBP4.4□□□□□ -1.71
SDH4YDR178W YLR112WQ12130 139 aa4.4□□□□□ -1.71
SDH4YDR178W COA3Q3E7B2 85 aa4.4□□□□□ -1.71
SDH4YDR178W YIL134C-AQ45U18 67 aa4.4□□□□□ -1.71
SDH4YDR178W HMRA2P0CY13 119 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 59 ms