RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	YPI1	P43587	155 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	MST27	P53176	234 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	POP3	P53833	195 aa	Predicted RBP	3.64	□□□□□ -1.83
SUP35	YDR172W	YIL014C-A	Q02598	104 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	GTO3	Q04806	366 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	YER145C-A	A0A023PYF4	145 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	SEC11	P15367	167 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	SNF11	P38956	169 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	VPS55	P47111	140 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	TOS8	P53147	276 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	SPG4	Q04438	115 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	DPP1	Q05521	289 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	HOR7	Q05827	59 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	IZH3	Q07959	543 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	GEP3	Q08622	556 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	YOL085C	Q99345	113 aa		3.64	□□□□□ -1.83
SUP35	YDR172W	ADH2	P00331	348 aa	Known RBP	3.63	□□□□□ -1.83
SUP35	YDR172W	RPL27A	P0C2H6	136 aa	Known RBP	3.63	□□□□□ -1.83
SUP35	YDR172W	CNL1	Q06333	122 aa		3.63	□□□□□ -1.83
SUP35	YDR172W	TIM22	Q12328	207 aa		3.63	□□□□□ -1.83
SUP35	YDR172W	YOR011W-A	Q3E807	68 aa		3.63	□□□□□ -1.83
SUP35	YDR172W	RPL12A	P0CX53	165 aa	Known RBP	3.63	□□□□□ -1.83
SUP35	YDR172W	RPL12B	P0CX54	165 aa		3.63	□□□□□ -1.83
SUP35	YDR172W	PRE1	P22141	198 aa	Known RBP	3.63	□□□□□ -1.83
SUP35	YDR172W	YCR041W	P37265	110 aa		3.63	□□□□□ -1.83
SUP35	YDR172W	YHR140W	P38842	239 aa		3.63	□□□□□ -1.83
SUP35	YDR172W	SPI1	P40092	148 aa		3.63	□□□□□ -1.83
SUP35	YDR172W	YGL230C	P53074	147 aa		3.63	□□□□□ -1.83
SUP35	YDR172W	CAX4	P53223	239 aa		3.63	□□□□□ -1.83
SUP35	YDR172W	UPS3	Q04006	179 aa		3.63	□□□□□ -1.83
SUP35	YDR172W	GPI19	Q04082	140 aa		3.63	□□□□□ -1.83
SUP35	YDR172W	PRM7	Q12459	698 aa		3.63	□□□□□ -1.83
SUP35	YDR172W	CCW14	O13547	238 aa		3.62	□□□□□ -1.83
SUP35	YDR172W	YFL068W	P0CX99	160 aa		3.62	□□□□□ -1.83
SUP35	YDR172W	YLL066W-A	P0CY00	160 aa		3.62	□□□□□ -1.83
SUP35	YDR172W	YLL067W-A	P0CY01	160 aa		3.62	□□□□□ -1.83
SUP35	YDR172W	GLC8	P41818	229 aa		3.62	□□□□□ -1.83
SUP35	YDR172W	DUO1	P53168	247 aa	Known RBP	3.62	□□□□□ -1.83
SUP35	YDR172W	DIA1	P54005	336 aa		3.62	□□□□□ -1.83
SUP35	YDR172W	MOT3	P54785	490 aa	Known RBP	3.62	□□□□□ -1.83
SUP35	YDR172W	STF1	P01098	86 aa		3.61	□□□□□ -1.83
SUP35	YDR172W	YNL194C	P40169	301 aa		3.61	□□□□□ -1.83
SUP35	YDR172W	MSL1	P40567	111 aa	Predicted RBP	3.61	□□□□□ -1.83
SUP35	YDR172W	ATG39	Q06159	398 aa		3.61	□□□□□ -1.83
SUP35	YDR172W	YPL162C	Q12042	273 aa		3.61	□□□□□ -1.83
SUP35	YDR172W	UTP23	Q12339	254 aa	Known RBP	3.61	□□□□□ -1.83
SUP35	YDR172W	FYV4	P38783	130 aa	Predicted RBP	3.61	□□□□□ -1.83
SUP35	YDR172W	TVP18	Q04767	167 aa		3.61	□□□□□ -1.83
SUP35	YDR172W	AGA1	P32323	725 aa		3.6	□□□□□ -1.83
SUP35	YDR172W	YER135C	P40082	130 aa		3.6	□□□□□ -1.83
SUP35	YDR172W	MRPL49	P40858	161 aa	Predicted RBP	3.6	□□□□□ -1.83
SUP35	YDR172W	FIP1	P45976	327 aa		3.6	□□□□□ -1.83
SUP35	YDR172W	YAR1	P46683	200 aa		3.6	□□□□□ -1.83
SUP35	YDR172W	ATP23	P53722	227 aa		3.6	□□□□□ -1.83
SUP35	YDR172W	GRH1	Q04410	372 aa	Known RBP	3.6	□□□□□ -1.83
SUP35	YDR172W	UTP20	P35194	2493 aa	Known RBP	3.6	□□□□□ -1.83
SUP35	YDR172W	YCR023C	P25351	611 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	UTR5	P32630	166 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	YHR022C	P38763	256 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	SIM1	P40472	476 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	YDL186W	P48568	277 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	YIP3	P53633	176 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	EOS1	P53938	366 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	YDR042C	Q03205	200 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	VPS71	Q03433	280 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	PAU23	Q07987	124 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	YPL257W	Q08974	193 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	PAU17	Q12370	124 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	HTL1	Q9URQ5	78 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	YPL080C	Q02826	108 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	BET5	Q03630	159 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	RRG8	Q06109	277 aa		3.59	□□□□□ -1.83
SUP35	YDR172W	SAL1	D6W196	494 aa		3.58	□□□□□ -1.84
SUP35	YDR172W	AQY1	P0CD91	305 aa		3.58	□□□□□ -1.84
SUP35	YDR172W	HAP3	P13434	144 aa		3.58	□□□□□ -1.84
SUP35	YDR172W	YCR007C	P25354	239 aa		3.58	□□□□□ -1.84
SUP35	YDR172W	YER076C	P40049	302 aa		3.58	□□□□□ -1.84
SUP35	YDR172W	DGA1	Q08650	418 aa		3.58	□□□□□ -1.84
SUP35	YDR172W	PRM3	Q08931	133 aa		3.58	□□□□□ -1.84
SUP35	YDR172W	DFM1	Q12743	341 aa	Known RBP	3.58	□□□□□ -1.84
SUP35	YDR172W	YNL146C-A	Q3E7Z1	64 aa		3.58	□□□□□ -1.84
SUP35	YDR172W	DYN1	P36022	4092 aa		3.58	□□□□□ -1.84
SUP35	YDR172W	RPL27B	P0C2H7	136 aa	Known RBP	3.58	□□□□□ -1.84
SUP35	YDR172W	RPL31A	P0C2H8	113 aa	Known RBP	3.58	□□□□□ -1.84
SUP35	YDR172W	KTI12	P34253	313 aa	Known RBP	3.58	□□□□□ -1.84
SUP35	YDR172W	YKR070W	P36151	352 aa	Known RBP	3.58	□□□□□ -1.84
SUP35	YDR172W	MGR2	Q02889	113 aa		3.58	□□□□□ -1.84
SUP35	YDR172W	CCW12	Q12127	133 aa		3.58	□□□□□ -1.84
SUP35	YDR172W	YLR050C	Q12155	161 aa	Known RBP	3.58	□□□□□ -1.84
SUP35	YDR172W	YOR097C	Q12274	175 aa	Predicted RBP	3.58	□□□□□ -1.84
SUP35	YDR172W	MRPL23	Q12487	163 aa	Predicted RBP	3.58	□□□□□ -1.84
SUP35	YDR172W	TAR1	Q8TGM6	124 aa		3.58	□□□□□ -1.84
SUP35	YDR172W	PFY1	P07274	126 aa		3.57	□□□□□ -1.84
SUP35	YDR172W	APS1	P35181	156 aa		3.57	□□□□□ -1.84
SUP35	YDR172W	MIG3	P39943	394 aa		3.57	□□□□□ -1.84
SUP35	YDR172W	YDR366C	P87287	132 aa		3.57	□□□□□ -1.84
SUP35	YDR172W	YLR112W	Q12130	139 aa		3.57	□□□□□ -1.84
SUP35	YDR172W	YBR200W-A	Q3E755	54 aa		3.57	□□□□□ -1.84
SUP35	YDR172W	YFR035C	P43608	114 aa		3.56	□□□□□ -1.84
SUP35	YDR172W	YNL184C	P53876	108 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms