RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C DDR48P18899 430 aaKnown RBP0.85□□□□□ -2.27
UFD2YDL190C UTP11P34247 250 aaPredicted RBP0.85□□□□□ -2.27
UFD2YDL190C YBR219CP38317 127 aa0.85□□□□□ -2.27
UFD2YDL190C SPG1P50088 95 aa0.85□□□□□ -2.27
UFD2YDL190C GEP7P53171 287 aa0.85□□□□□ -2.27
UFD2YDL190C ELC1Q03071 99 aa0.85□□□□□ -2.27
UFD2YDL190C LDB18Q07887 179 aa0.85□□□□□ -2.27
UFD2YDL190C YOL162WP0CF19 215 aa0.84□□□□□ -2.27
UFD2YDL190C ETR1P38071 380 aa0.84□□□□□ -2.27
UFD2YDL190C ALB1P47019 175 aaPredicted RBP0.84□□□□□ -2.27
UFD2YDL190C THG1P53215 237 aaKnown RBP0.84□□□□□ -2.27
UFD2YDL190C DAD4P69851 72 aa0.84□□□□□ -2.27
UFD2YDL190C UPS3Q04006 179 aa0.84□□□□□ -2.27
UFD2YDL190C ATG10Q07879 167 aa0.84□□□□□ -2.27
UFD2YDL190C FIT2Q08906 153 aa0.84□□□□□ -2.27
UFD2YDL190C YOR289WQ12012 251 aaPredicted RBP0.84□□□□□ -2.27
UFD2YDL190C YOR015WQ12169 119 aa0.84□□□□□ -2.27
UFD2YDL190C YOR381W-AQ3E804 55 aa0.84□□□□□ -2.27
UFD2YDL190C YKR070WP36151 352 aaKnown RBP0.84□□□□□ -2.28
UFD2YDL190C YPT31P38555 223 aaKnown RBP0.84□□□□□ -2.28
UFD2YDL190C TMA23Q03525 211 aa0.84□□□□□ -2.28
UFD2YDL190C DML1Q03652 475 aa0.84□□□□□ -2.28
UFD2YDL190C YLR162WQ06235 118 aa0.84□□□□□ -2.28
UFD2YDL190C YHR007C-AQ07074 71 aa0.84□□□□□ -2.28
UFD2YDL190C FYV7Q12247 151 aa0.84□□□□□ -2.28
UFD2YDL190C MRS4P23500 304 aa0.83□□□□□ -2.28
UFD2YDL190C SFT2P38166 215 aa0.83□□□□□ -2.28
UFD2YDL190C PHS1P40857 217 aa0.83□□□□□ -2.28
UFD2YDL190C NSE4P43124 402 aa0.83□□□□□ -2.28
UFD2YDL190C PAC10P48363 199 aa0.83□□□□□ -2.28
UFD2YDL190C ATP19P81451 68 aa0.83□□□□□ -2.28
UFD2YDL190C UPS1Q05776 175 aa0.83□□□□□ -2.28
UFD2YDL190C CSI2Q08054 341 aa0.83□□□□□ -2.28
UFD2YDL190C ATG41Q12048 136 aa0.83□□□□□ -2.28
UFD2YDL190C ADK1P07170 222 aaKnown RBP0.83□□□□□ -2.28
UFD2YDL190C NMT1P14743 455 aa0.83□□□□□ -2.28
UFD2YDL190C YCR101CP25607 182 aa0.83□□□□□ -2.28
UFD2YDL190C LHP1P33399 275 aaKnown RBP0.83□□□□□ -2.28
UFD2YDL190C MRPL15P36523 253 aa0.83□□□□□ -2.28
UFD2YDL190C YEL067CP39978 195 aa0.83□□□□□ -2.28
UFD2YDL190C GAT4P40569 121 aa0.83□□□□□ -2.28
UFD2YDL190C SAE3P89114 91 aa0.83□□□□□ -2.28
UFD2YDL190C MZM1Q03429 123 aaPredicted RBP0.83□□□□□ -2.28
UFD2YDL190C YML079WQ03629 201 aa0.83□□□□□ -2.28
UFD2YDL190C YHP1Q04116 353 aa0.83□□□□□ -2.28
UFD2YDL190C YPL225WQ08971 146 aaKnown RBP0.83□□□□□ -2.28
UFD2YDL190C FCF2Q12035 217 aaPredicted RBP0.83□□□□□ -2.28
UFD2YDL190C KTI11Q3E840 82 aa0.83□□□□□ -2.28
UFD2YDL190C SCS22Q6Q595 175 aa0.83□□□□□ -2.28
UFD2YDL190C FLX1P40464 311 aa0.82□□□□□ -2.28
UFD2YDL190C RPS12P48589 143 aaKnown RBP0.82□□□□□ -2.28
UFD2YDL190C TVP18Q04767 167 aa0.82□□□□□ -2.28
UFD2YDL190C HUT1Q12520 339 aa0.82□□□□□ -2.28
UFD2YDL190C DDP1Q99321 188 aaKnown RBP0.82□□□□□ -2.28
UFD2YDL190C CYR1P08678 2026 aaKnown RBP0.82□□□□□ -2.28
UFD2YDL190C SPS2P08459 502 aa0.82□□□□□ -2.28
UFD2YDL190C YGL041W-AP0C5N3 154 aa0.82□□□□□ -2.28
UFD2YDL190C YER039C-AP0CD97 72 aa0.82□□□□□ -2.28
UFD2YDL190C INO4P13902 151 aa0.82□□□□□ -2.28
UFD2YDL190C STF2P16965 84 aa0.82□□□□□ -2.28
UFD2YDL190C ANB1P19211 157 aa0.82□□□□□ -2.28
UFD2YDL190C YCR050CP25630 102 aa0.82□□□□□ -2.28
UFD2YDL190C RPL13BP40212 199 aaKnown RBP0.82□□□□□ -2.28
UFD2YDL190C YGR269WP40326 108 aa0.82□□□□□ -2.28
UFD2YDL190C LSM8P47093 109 aaKnown RBP0.82□□□□□ -2.28
UFD2YDL190C KEI1Q06346 221 aa0.82□□□□□ -2.28
UFD2YDL190C YDL157CQ12082 118 aa0.82□□□□□ -2.28
UFD2YDL190C RPL13AQ12690 199 aaPredicted RBP0.82□□□□□ -2.28
UFD2YDL190C YOR032W-AQ8TGS1 66 aa0.82□□□□□ -2.28
UFD2YDL190C QCR8P08525 94 aa0.82□□□□□ -2.28
UFD2YDL190C RPB11P38902 120 aa0.82□□□□□ -2.28
UFD2YDL190C MPM1P40364 252 aa0.82□□□□□ -2.28
UFD2YDL190C YGL230CP53074 147 aa0.82□□□□□ -2.28
UFD2YDL190C MPC1P53157 130 aaKnown RBP0.82□□□□□ -2.28
UFD2YDL190C YDL241WQ07738 123 aa0.82□□□□□ -2.28
UFD2YDL190C BEM2P39960 2167 aaKnown RBP0.81□□□□□ -2.28
UFD2YDL190C YGL010WP25338 174 aa0.81□□□□□ -2.28
UFD2YDL190C YAL064WP39711 94 aa0.81□□□□□ -2.28
UFD2YDL190C DIE2P50076 525 aa0.81□□□□□ -2.28
UFD2YDL190C CWC27Q02770 301 aa0.81□□□□□ -2.28
UFD2YDL190C SOM1Q05676 74 aa0.81□□□□□ -2.28
UFD2YDL190C NMA1Q06178 401 aaKnown RBP0.81□□□□□ -2.28
UFD2YDL190C RAF1Q06891 181 aa0.81□□□□□ -2.28
UFD2YDL190C YOR385WQ08909 290 aa0.81□□□□□ -2.28
UFD2YDL190C MAK31P23059 88 aa0.81□□□□□ -2.28
UFD2YDL190C RPB7P34087 171 aa0.81□□□□□ -2.28
UFD2YDL190C HPA3P39979 161 aa0.81□□□□□ -2.28
UFD2YDL190C HYR1P40581 163 aaKnown RBP0.81□□□□□ -2.28
UFD2YDL190C BAT2P47176 376 aaKnown RBP0.81□□□□□ -2.28
UFD2YDL190C YMR252CQ04814 134 aa0.81□□□□□ -2.28
UFD2YDL190C IRC19Q07843 230 aa0.81□□□□□ -2.28
UFD2YDL190C YLR042CQ07990 161 aa0.81□□□□□ -2.28
UFD2YDL190C COX5BP00425 151 aa0.8□□□□□ -2.28
UFD2YDL190C BUD23P25627 275 aaPredicted RBP0.8□□□□□ -2.28
UFD2YDL190C YHL042WP38729 150 aa0.8□□□□□ -2.28
UFD2YDL190C YAR029WP39549 74 aa0.8□□□□□ -2.28
UFD2YDL190C CCS1P40202 249 aaKnown RBP0.8□□□□□ -2.28
UFD2YDL190C RCE1Q03530 315 aa0.8□□□□□ -2.28
UFD2YDL190C ELP6Q04868 273 aa0.8□□□□□ -2.28
UFD2YDL190C RTR2Q12378 196 aa0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms