RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	OST3	P48439	350 aa		4.04	□□□□□ -1.76
ROX3	YBL093C	YDL186W	P48568	277 aa		4.04	□□□□□ -1.76
ROX3	YBL093C	THG1	P53215	237 aa	Known RBP	4.04	□□□□□ -1.76
ROX3	YBL093C	CSM4	Q08955	156 aa		4.04	□□□□□ -1.76
ROX3	YBL093C	FSF1	Q12029	327 aa	Known RBP	4.04	□□□□□ -1.76
ROX3	YBL093C	POM33	Q12164	279 aa		4.04	□□□□□ -1.76
ROX3	YBL093C	TIM22	Q12328	207 aa		4.04	□□□□□ -1.76
ROX3	YBL093C	YOR011W-A	Q3E807	68 aa		4.04	□□□□□ -1.76
ROX3	YBL093C	ZRT1	P32804	376 aa		4.03	□□□□□ -1.76
ROX3	YBL093C	YER135C	P40082	130 aa		4.03	□□□□□ -1.76
ROX3	YBL093C	MRPL49	P40858	161 aa	Predicted RBP	4.03	□□□□□ -1.76
ROX3	YBL093C	BRP1	P53194	125 aa		4.03	□□□□□ -1.76
ROX3	YBL093C	YMR244W	Q04018	355 aa		4.03	□□□□□ -1.76
ROX3	YBL093C	YPL162C	Q12042	273 aa		4.03	□□□□□ -1.76
ROX3	YBL093C	VAR1	P02381	398 aa		4.02	□□□□□ -1.77
ROX3	YBL093C	RPL27A	P0C2H6	136 aa	Known RBP	4.02	□□□□□ -1.77
ROX3	YBL093C	YER134C	P40081	178 aa		4.02	□□□□□ -1.77
ROX3	YBL093C	AGE2	P40529	298 aa		4.02	□□□□□ -1.77
ROX3	YBL093C	COX16	P47081	118 aa		4.02	□□□□□ -1.77
ROX3	YBL093C	MIC26	P50087	233 aa		4.02	□□□□□ -1.77
ROX3	YBL093C	GPI19	Q04082	140 aa		4.02	□□□□□ -1.77
ROX3	YBL093C	GTO3	Q04806	366 aa		4.02	□□□□□ -1.77
ROX3	YBL093C	RRG8	Q06109	277 aa		4.02	□□□□□ -1.77
ROX3	YBL093C	COA6	Q3E846	104 aa		4.02	□□□□□ -1.77
ROX3	YBL093C	YIL134C-A	Q45U18	67 aa		4.02	□□□□□ -1.77
ROX3	YBL093C	YGR035W-A	Q45U48	73 aa		4.02	□□□□□ -1.77
ROX3	YBL093C	YOL085C	Q99345	113 aa		4.02	□□□□□ -1.77
ROX3	YBL093C	AGA1	P32323	725 aa		4.01	□□□□□ -1.77
ROX3	YBL093C	GSP1	P32835	219 aa	Known RBP	4.01	□□□□□ -1.77
ROX3	YBL093C	GSP2	P32836	220 aa	Known RBP	4.01	□□□□□ -1.77
ROX3	YBL093C	YKL102C	P34249	101 aa		4.01	□□□□□ -1.77
ROX3	YBL093C	YKR032W	P36127	104 aa		4.01	□□□□□ -1.77
ROX3	YBL093C	YHR140W	P38842	239 aa		4.01	□□□□□ -1.77
ROX3	YBL093C	MPC2	P38857	129 aa		4.01	□□□□□ -1.77
ROX3	YBL093C	MIG3	P39943	394 aa		4.01	□□□□□ -1.77
ROX3	YBL093C	YNL200C	P40165	246 aa	Known RBP	4.01	□□□□□ -1.77
ROX3	YBL093C	CDC40	P40968	455 aa	Predicted RBP	4.01	□□□□□ -1.77
ROX3	YBL093C	LSM8	P47093	109 aa	Known RBP	4.01	□□□□□ -1.77
ROX3	YBL093C	YGR017W	P53210	297 aa		4.01	□□□□□ -1.77
ROX3	YBL093C	MRPS8	Q03799	155 aa		4.01	□□□□□ -1.77
ROX3	YBL093C	YBR144C	P34215	104 aa		4	□□□□□ -1.77
ROX3	YBL093C	ECM33	P38248	429 aa	Known RBP	4	□□□□□ -1.77
ROX3	YBL093C	PET8	P38921	284 aa		4	□□□□□ -1.77
ROX3	YBL093C	TEM1	P38987	245 aa		4	□□□□□ -1.77
ROX3	YBL093C	YJL028W	P47062	111 aa		4	□□□□□ -1.77
ROX3	YBL093C	YGL118C	P53132	145 aa		4	□□□□□ -1.77
ROX3	YBL093C	ERV14	P53173	138 aa		4	□□□□□ -1.77
ROX3	YBL093C	ALG13	P53178	202 aa		4	□□□□□ -1.77
ROX3	YBL093C	DIA1	P54005	336 aa		4	□□□□□ -1.77
ROX3	YBL093C	YBR126W-A	Q8TGU7	68 aa		4	□□□□□ -1.77
ROX3	YBL093C	MRPL11	P36521	249 aa	Predicted RBP	3.99	□□□□□ -1.77
ROX3	YBL093C	WIP1	Q2V2P8	89 aa		3.99	□□□□□ -1.77
ROX3	YBL093C	YBR200W-A	Q3E755	54 aa		3.99	□□□□□ -1.77
ROX3	YBL093C	PAU16	P35994	123 aa		3.98	□□□□□ -1.77
ROX3	YBL093C	SEC72	P39742	193 aa	Known RBP	3.98	□□□□□ -1.77
ROX3	YBL093C	YFR035C	P43608	114 aa		3.98	□□□□□ -1.77
ROX3	YBL093C	CGR1	P53188	120 aa		3.98	□□□□□ -1.77
ROX3	YBL093C	YIL014C-A	Q02598	104 aa		3.98	□□□□□ -1.77
ROX3	YBL093C	YMR230W-A	Q3E7B5	62 aa		3.98	□□□□□ -1.77
ROX3	YBL093C	RPL32	P38061	130 aa	Known RBP	3.97	□□□□□ -1.77
ROX3	YBL093C	KEG1	P43614	200 aa		3.97	□□□□□ -1.77
ROX3	YBL093C	DUO1	P53168	247 aa	Known RBP	3.97	□□□□□ -1.77
ROX3	YBL093C	YDR274C	P87283	123 aa		3.97	□□□□□ -1.77
ROX3	YBL093C	MGR2	Q02889	113 aa		3.97	□□□□□ -1.77
ROX3	YBL093C	RPL16B	P26785	198 aa	Known RBP	3.96	□□□□□ -1.78
ROX3	YBL093C	SCM4	P32564	187 aa		3.96	□□□□□ -1.78
ROX3	YBL093C	YDR366C	P87287	132 aa		3.96	□□□□□ -1.78
ROX3	YBL093C	GRH1	Q04410	372 aa	Known RBP	3.96	□□□□□ -1.78
ROX3	YBL093C	Q0255	P03881	472 aa		3.95	□□□□□ -1.78
ROX3	YBL093C	PFY1	P07274	126 aa		3.95	□□□□□ -1.78
ROX3	YBL093C	RPS11A	P0CX47	156 aa	Known RBP	3.95	□□□□□ -1.78
ROX3	YBL093C	RPS11B	P0CX48	156 aa	Known RBP	3.95	□□□□□ -1.78
ROX3	YBL093C	FUN14	P18411	198 aa		3.95	□□□□□ -1.78
ROX3	YBL093C	MIG1	P27705	504 aa		3.95	□□□□□ -1.78
ROX3	YBL093C	KTI12	P34253	313 aa	Known RBP	3.95	□□□□□ -1.78
ROX3	YBL093C	RRT13	P40042	185 aa		3.95	□□□□□ -1.78
ROX3	YBL093C	YER076C	P40049	302 aa		3.95	□□□□□ -1.78
ROX3	YBL093C	VHS2	P40463	436 aa		3.95	□□□□□ -1.78
ROX3	YBL093C	POP3	P53833	195 aa	Predicted RBP	3.95	□□□□□ -1.78
ROX3	YBL093C	YDR042C	Q03205	200 aa		3.95	□□□□□ -1.78
ROX3	YBL093C	VPS71	Q03433	280 aa		3.95	□□□□□ -1.78
ROX3	YBL093C	TPT1	Q12272	230 aa	Known RBP	3.95	□□□□□ -1.78
ROX3	YBL093C	SAL1	D6W196	494 aa		3.94	□□□□□ -1.78
ROX3	YBL093C	RPL2A	P0CX45	254 aa	Known RBP	3.94	□□□□□ -1.78
ROX3	YBL093C	RPL2B	P0CX46	254 aa	Known RBP	3.94	□□□□□ -1.78
ROX3	YBL093C	PRE1	P22141	198 aa	Known RBP	3.94	□□□□□ -1.78
ROX3	YBL093C	AIM34	Q03673	198 aa		3.94	□□□□□ -1.78
ROX3	YBL093C	TVP18	Q04767	167 aa		3.94	□□□□□ -1.78
ROX3	YBL093C	FCF1	Q05498	189 aa	Predicted RBP	3.94	□□□□□ -1.78
ROX3	YBL093C	CNL1	Q06333	122 aa		3.94	□□□□□ -1.78
ROX3	YBL093C	YPR014C	Q6B0W2	109 aa		3.94	□□□□□ -1.78
ROX3	YBL093C	MRPL44	P19956	98 aa		3.93	□□□□□ -1.78
ROX3	YBL093C	YCR023C	P25351	611 aa		3.93	□□□□□ -1.78
ROX3	YBL093C	YCH1	P42937	148 aa		3.93	□□□□□ -1.78
ROX3	YBL093C	DPP1	Q05521	289 aa		3.93	□□□□□ -1.78
ROX3	YBL093C	FYV7	Q12247	151 aa		3.93	□□□□□ -1.78
ROX3	YBL093C	HTL1	Q9URQ5	78 aa		3.93	□□□□□ -1.78
ROX3	YBL093C	RPL27B	P0C2H7	136 aa	Known RBP	3.92	□□□□□ -1.78
ROX3	YBL093C	SEC11	P15367	167 aa		3.92	□□□□□ -1.78
ROX3	YBL093C	HAC1	P41546	238 aa		3.92	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms