RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 MST27P53176 234 aa6.89□□□□□ -1.31
LSR1LSR1 YLR296WQ05898 108 aa6.89□□□□□ -1.31
LSR1LSR1 MST28P39552 234 aa6.88□□□□□ -1.31
LSR1LSR1 YNL198CP40166 100 aa6.88□□□□□ -1.31
LSR1LSR1 YJR096WP47137 282 aa6.88□□□□□ -1.31
LSR1LSR1 GPI19Q04082 140 aa6.88□□□□□ -1.31
LSR1LSR1 SBH2P52871 88 aa6.87□□□□□ -1.31
LSR1LSR1 MOT3P54785 490 aaKnown RBP6.87□□□□□ -1.31
LSR1LSR1 DUT1P33317 147 aa6.86□□□□□ -1.31
LSR1LSR1 SPI1P40092 148 aa6.86□□□□□ -1.31
LSR1LSR1 YPL073CP40323 161 aa6.86□□□□□ -1.31
LSR1LSR1 YGR219WP53307 113 aa6.86□□□□□ -1.31
LSR1LSR1 ELC1Q03071 99 aa6.86□□□□□ -1.31
LSR1LSR1 VTS1Q08831 523 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
LSR1LSR1 YHR140WP38842 239 aa6.85□□□□□ -1.31
LSR1LSR1 UBC7Q02159 165 aa6.85□□□□□ -1.31
LSR1LSR1 MGR2Q02889 113 aa6.85□□□□□ -1.31
LSR1LSR1 YOL160WQ08321 113 aa6.85□□□□□ -1.31
LSR1LSR1 ADH1P00330 348 aaKnown RBP6.84□□□□□ -1.31
LSR1LSR1 YPT53P36019 220 aa6.84□□□□□ -1.31
LSR1LSR1 LCB3P47013 409 aa6.84□□□□□ -1.31
LSR1LSR1 RPL15BP54780 204 aaPredicted RBP6.84□□□□□ -1.31
LSR1LSR1 YML122CQ03207 126 aa6.84□□□□□ -1.31
LSR1LSR1 YMR103CQ04436 120 aa6.84□□□□□ -1.31
LSR1LSR1 BPH1P25356 2167 aa6.84□□□□□ -1.32
LSR1LSR1 PHO85P17157 305 aa6.83□□□□□ -1.32
LSR1LSR1 SCW10Q04951 389 aa6.83□□□□□ -1.32
LSR1LSR1 GEP3Q08622 556 aa6.83□□□□□ -1.32
LSR1LSR1 TIM22Q12328 207 aa6.83□□□□□ -1.32
LSR1LSR1 CYC7P00045 113 aa6.82□□□□□ -1.32
LSR1LSR1 RPP2AP05319 106 aaKnown RBP6.82□□□□□ -1.32
LSR1LSR1 PFY1P07274 126 aa6.82□□□□□ -1.32
LSR1LSR1 YER076CP40049 302 aa6.82□□□□□ -1.32
LSR1LSR1 YER181CP40097 107 aa6.82□□□□□ -1.32
LSR1LSR1 POR2P40478 281 aa6.82□□□□□ -1.32
LSR1LSR1 YIR020CP40575 100 aa6.82□□□□□ -1.32
LSR1LSR1 YGR025WP53216 100 aa6.82□□□□□ -1.32
LSR1LSR1 TMC1Q08422 150 aaPredicted RBP6.82□□□□□ -1.32
LSR1LSR1 YKR041WP36134 250 aa6.81□□□□□ -1.32
LSR1LSR1 TOS6P48560 102 aa6.81□□□□□ -1.32
LSR1LSR1 FCF1Q05498 189 aaPredicted RBP6.81□□□□□ -1.32
LSR1LSR1 DGA1Q08650 418 aa6.81□□□□□ -1.32
LSR1LSR1 YLR112WQ12130 139 aa6.81□□□□□ -1.32
LSR1LSR1 PCL2P25693 308 aa6.8□□□□□ -1.32
LSR1LSR1 MIC12P38341 106 aa6.8□□□□□ -1.32
LSR1LSR1 RDL1Q12305 139 aaKnown RBP6.8□□□□□ -1.32
LSR1LSR1 DFM1Q12743 341 aaKnown RBP6.8□□□□□ -1.32
LSR1LSR1 AQY1P0CD91 305 aa6.79□□□□□ -1.32
LSR1LSR1 YNL217WP40152 326 aa6.79□□□□□ -1.32
LSR1LSR1 BNA1P47096 177 aa6.79□□□□□ -1.32
LSR1LSR1 DIA1P54005 336 aa6.79□□□□□ -1.32
LSR1LSR1 VMA11P32842 164 aa6.78□□□□□ -1.32
LSR1LSR1 RPL32P38061 130 aaKnown RBP6.78□□□□□ -1.32
LSR1LSR1 NHP2P32495 156 aaPredicted RBP6.77□□□□□ -1.33
LSR1LSR1 YKL070WP36087 169 aa6.77□□□□□ -1.33
LSR1LSR1 ATP23P53722 227 aa6.77□□□□□ -1.33
LSR1LSR1 NUM1Q00402 2748 aa6.77□□□□□ -1.33
LSR1LSR1 ATX1P38636 73 aa6.76□□□□□ -1.33
LSR1LSR1 SNF11P38956 169 aa6.76□□□□□ -1.33
LSR1LSR1 DUO1P53168 247 aaKnown RBP6.76□□□□□ -1.33
LSR1LSR1 YMR317WQ04893 1140 aa6.76□□□□□ -1.33
LSR1LSR1 YPR013CQ12145 317 aa6.76□□□□□ -1.33
LSR1LSR1 MRPL49P40858 161 aaPredicted RBP6.75□□□□□ -1.33
LSR1LSR1 YMR181CQ03231 154 aa6.75□□□□□ -1.33
LSR1LSR1 YPL261CQ08976 102 aa6.75□□□□□ -1.33
LSR1LSR1 IGO2Q9P305 131 aa6.75□□□□□ -1.33
LSR1LSR1 HMRA2P0CY13 119 aa6.74□□□□□ -1.33
LSR1LSR1 AGA1P32323 725 aa6.74□□□□□ -1.33
LSR1LSR1 KTI12P34253 313 aaKnown RBP6.74□□□□□ -1.33
LSR1LSR1 URM1P40554 99 aaPredicted RBP6.74□□□□□ -1.33
LSR1LSR1 TIM10P87108 93 aa6.74□□□□□ -1.33
LSR1LSR1 COA3Q3E7B2 85 aa6.74□□□□□ -1.33
LSR1LSR1 RPL42AP0CX27 106 aaKnown RBP6.73□□□□□ -1.33
LSR1LSR1 RPL42BP0CX28 106 aaKnown RBP6.73□□□□□ -1.33
LSR1LSR1 INO2P26798 304 aa6.73□□□□□ -1.33
LSR1LSR1 NCE103P53615 221 aa6.73□□□□□ -1.33
LSR1LSR1 YOR097CQ12274 175 aaPredicted RBP6.73□□□□□ -1.33
LSR1LSR1 URA2P07259 2214 aaKnown RBP6.72□□□□□ -1.33
LSR1LSR1 YHR022CP38763 256 aa6.72□□□□□ -1.33
LSR1LSR1 YEL067CP39978 195 aa6.72□□□□□ -1.33
LSR1LSR1 YNL194CP40169 301 aa6.72□□□□□ -1.33
LSR1LSR1 LSM6Q06406 86 aaKnown RBP6.72□□□□□ -1.33
LSR1LSR1 YOR008C-AQ3E7B9 74 aa6.72□□□□□ -1.33
LSR1LSR1 YOL085CQ99345 113 aa6.72□□□□□ -1.33
LSR1LSR1 CCW14O13547 238 aa6.71□□□□□ -1.34
LSR1LSR1 VAR1P02381 398 aa6.71□□□□□ -1.34
LSR1LSR1 YDL022C-AP0C5L6 82 aa6.71□□□□□ -1.34
LSR1LSR1 OXA1P39952 402 aa6.71□□□□□ -1.34
LSR1LSR1 HPA2Q06592 156 aa6.71□□□□□ -1.34
LSR1LSR1 PRM3Q08931 133 aa6.71□□□□□ -1.34
LSR1LSR1 CCW12Q12127 133 aa6.71□□□□□ -1.34
LSR1LSR1 OST2P46964 130 aa6.7□□□□□ -1.34
LSR1LSR1 ABM1P47146 123 aa6.7□□□□□ -1.34
LSR1LSR1 GLO1P50107 326 aa6.7□□□□□ -1.34
LSR1LSR1 YIP3P53633 176 aa6.7□□□□□ -1.34
LSR1LSR1 YBR200W-AQ3E755 54 aa6.69□□□□□ -1.34
LSR1LSR1 TEL1P38110 2787 aa6.69□□□□□ -1.34
LSR1LSR1 CDC43P18898 376 aa6.68□□□□□ -1.34
LSR1LSR1 KEG1P43614 200 aa6.68□□□□□ -1.34
LSR1LSR1 YNR077CP53758 84 aa6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 71 ms