RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ACBD6Q9BR61 282 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 CRISPLD2Q9H0B8 497 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 PRDM16Q9HAZ2 1276 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 PNPLA8Q9NP80 782 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 ST7Q9NRC1 585 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 FAM114A2Q9NRY5 505 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 PCYOX1Q9UHG3 505 aa10.24□□□□□ -0.77
PHGDH-215ENST00000641371 UTP11Q9Y3A2 253 aaKnown RBP10.24□□□□□ -0.77
PHGDH-215ENST00000641371 ZNF487B1APH4 448 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 SPTLC1O15269 473 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 MGEA5O60502 916 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 ZNF189O75820 626 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-215ENST00000641371 B3GAT3O94766 335 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 HEXIM1O94992 359 aaKnown RBP10.23□□□□□ -0.77
PHGDH-215ENST00000641371 TJP3O95049 919 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 CALCAP01258 141 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 FAM200BP0CF97 657 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 NPR3P17342 541 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 PTPN1P18031 435 aaKnown RBP10.23□□□□□ -0.77
PHGDH-215ENST00000641371 GPD1P21695 349 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 CLCNKBP51801 687 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 DRG2P55039 364 aaKnown RBP10.23□□□□□ -0.77
PHGDH-215ENST00000641371 TSPY1Q01534 308 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 SLC6A3Q01959 620 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 ELAVL2Q12926 359 aaKnown RBP10.23□□□□□ -0.77
PHGDH-215ENST00000641371 SMC1AQ14683 1233 aaKnown RBP10.23□□□□□ -0.77
PHGDH-215ENST00000641371 DCAF12L1Q5VU92 463 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 OR6B2Q6IFH4 312 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 FBXO46Q6PJ61 603 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-215ENST00000641371 CCNI2Q6ZMN8 369 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-215ENST00000641371 SLC26A9Q7LBE3 791 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 CTU1Q7Z7A3 348 aaKnown RBP10.23□□□□□ -0.77
PHGDH-215ENST00000641371 TTC13Q8NBP0 860 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 CCHCR1Q8TD31 782 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 KRT35Q92764 455 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 SLCO2A1Q92959 643 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 BTBD6Q96KE9 485 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 SYT15Q9BQS2 421 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 LRRC1Q9BTT6 524 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 DUSP16Q9BY84 665 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 LRRC19Q9H756 370 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 VIPAS39Q9H9C1 493 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 GOLGA2P5Q9HBQ8 144 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 GDF3Q9NR23 364 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 METTL5Q9NRN9 209 aaKnown RBP10.23□□□□□ -0.77
PHGDH-215ENST00000641371 DDX43Q9NXZ2 648 aaKnown RBP10.23□□□□□ -0.77
PHGDH-215ENST00000641371 RRN3Q9NYV6 651 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 PCDHB8Q9UN66 801 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 PCDHB7Q9Y5E2 793 aa10.23□□□□□ -0.77
PHGDH-215ENST00000641371 E5RJQ4 531 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 GOLGA8SH3BPF8 625 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 SYN3O14994 580 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 EFCAB14O75071 495 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 CXCL10P02778 98 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 TFRCP02786 760 aaKnown RBP10.22□□□□□ -0.77
PHGDH-215ENST00000641371 PYGMP11217 842 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 SDC4P31431 198 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 RDXP35241 583 aaKnown RBP10.22□□□□□ -0.77
PHGDH-215ENST00000641371 SSR1P43307 286 aaKnown RBP10.22□□□□□ -0.77
PHGDH-215ENST00000641371 PTPN9P43378 593 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 RPL7AP62424 266 aaKnown RBP10.22□□□□□ -0.77
PHGDH-215ENST00000641371 VSNL1P62760 191 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 PDE4CQ08493 712 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 DSC1Q08554 894 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 SMARCB1Q12824 385 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 BOLA3Q53S33 107 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 CYP4A22Q5TCH4 519 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 WSCD1Q658N2 575 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 DRICH1Q6PGQ1 229 aaPredicted RBP10.22□□□□□ -0.77
PHGDH-215ENST00000641371 OLFML1Q6UWY5 402 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 C4orf50Q6ZRC1 276 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 CEP128Q6ZU80 1094 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 TTC30AQ86WT1 665 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 PSTKQ8IV42 348 aaKnown RBP10.22□□□□□ -0.77
PHGDH-215ENST00000641371 CCDC50Q8IVM0 306 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 MAP7D3Q8IWC1 876 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 SCML4Q8N228 414 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 C12orf29Q8N999 325 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 RNF169Q8NCN4 708 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 UBA3Q8TBC4 463 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 MYCBPAPQ8TBZ2 947 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 TEKT4Q8WW24 435 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 LPPQ93052 612 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 SMARCD1Q96GM5 515 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 PNKPQ96T60 521 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 TMEM175Q9BSA9 504 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 TSPYL1Q9H0U9 437 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 LRRC4Q9HBW1 653 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 FAM49BQ9NUQ9 324 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 CYTH4Q9UIA0 394 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 LRFN2Q9ULH4 789 aa10.22□□□□□ -0.77
PHGDH-215ENST00000641371 TSC2P49815 1807 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 TTC3P53804 2025 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 CASTOR2A6NHX0 329 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 C2CD4BA6NLJ0 364 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 RRP9O43818 475 aaKnown RBP10.21□□□□□ -0.77
PHGDH-215ENST00000641371 HSF2BPO75031 334 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 GAS8O95995 478 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 POMCP01189 267 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 KRT1P04264 644 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms