RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 ZNF576Q9H609 170 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 SCUBE2Q9NQ36 999 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 CYLDQ9NQC7 956 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 IL37Q9NZH6 218 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 LMCD1Q9NZU5 365 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 AFF4Q9UHB7 1163 aaKnown RBP9.67□□□□□ -0.86
SCARB2-225ENST00000640900 CDY1Q9Y6F8 540 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 COL4A4P53420 1690 aaPredicted RBP9.67□□□□□ -0.86
SCARB2-225ENST00000640900 MYO9BQ13459 2157 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 ATP8B3O60423 1300 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 MTMR11A4FU01 709 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 GOLGA6L6A8MZA4 724 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 ZNF263O14978 683 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 MED7O43513 233 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 OR4Q2P0C623 313 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 SETSIPP0DME0 302 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 RPL17P18621 184 aaKnown RBP9.66□□□□□ -0.86
SCARB2-225ENST00000640900 EIF4A3P38919 411 aaKnown RBP9.66□□□□□ -0.86
SCARB2-225ENST00000640900 USP8P40818 1118 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 PLA2G4AP47712 749 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 CACNA2D1P54289 1103 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 NOMO3P69849 1222 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 CENPCQ03188 943 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 ARID5AQ03989 594 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 PTP4A2Q12974 167 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 COL19A1Q14993 1142 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 SLC18A3Q16572 532 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 KIAA1841Q6NSI8 718 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 DENND1BQ6P3S1 775 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 VSTM1Q6UX27 236 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 RNF19BQ6ZMZ0 732 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 C4orf50Q6ZRC1 276 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 TMC7Q7Z402 723 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 FAM35AQ86V20 835 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 TCEAL8Q8IYN2 117 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 ATAD1Q8NBU5 361 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 CCDC112Q8NEF3 446 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 SPPL2BQ8TCT7 592 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 SLC2A14Q8TDB8 520 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 ARNTL2Q8WYA1 636 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 KCTD13Q8WZ19 329 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 MRPL38Q96DV4 380 aaKnown RBP9.66□□□□□ -0.86
SCARB2-225ENST00000640900 SMOQ99835 787 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 BAG1Q99933 345 aaPredicted RBP9.66□□□□□ -0.86
SCARB2-225ENST00000640900 SLC4A5Q9BY07 1137 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 ISCUQ9H1K1 167 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 NHEJ1Q9H9Q4 299 aaPredicted RBP9.66□□□□□ -0.86
SCARB2-225ENST00000640900 PNPLA8Q9NP80 782 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 ZNHIT6Q9NWK9 470 aaKnown RBP9.66□□□□□ -0.86
SCARB2-225ENST00000640900 CYTH4Q9UIA0 394 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 TSPAN16Q9UKR8 245 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 MTUS1Q9ULD2 1270 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 PCDHGC5Q9Y5F6 944 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 PATJQ8NI35 1801 aa9.66□□□□□ -0.86
SCARB2-225ENST00000640900 NCANO14594 1321 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 MTCL1Q9Y4B5 1905 aaKnown RBP9.65□□□□□ -0.86
SCARB2-225ENST00000640900 A0A087X0T9 212 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 FAM92AA1XBS5 289 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 CLDN5O00501 218 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 C2CD2LO14523 706 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 TNFRSF10BO14763 440 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 XPO1O14980 1071 aaKnown RBP9.65□□□□□ -0.86
SCARB2-225ENST00000640900 THAP12O43422 761 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 CLASP2O75122 1294 aaKnown RBP9.65□□□□□ -0.86
SCARB2-225ENST00000640900 BEST1O76090 585 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 SEC24AO95486 1093 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 ADH1AP07327 375 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 POU2F2P09086 479 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 FAM228BP0C875 321 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 HAPLN1P10915 354 aaPredicted RBP9.65□□□□□ -0.86
SCARB2-225ENST00000640900 CD19P15391 556 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 NPR3P17342 541 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 GABRB2P47870 512 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 CLCN4P51793 760 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 BCAT1P54687 386 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 GSCP56915 257 aaPredicted RBP9.65□□□□□ -0.86
SCARB2-225ENST00000640900 PDE4CQ08493 712 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 BST2Q10589 180 aaKnown RBP9.65□□□□□ -0.86
SCARB2-225ENST00000640900 DUSP6Q16828 381 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 CLEC16AQ2KHT3 1053 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 TSR1Q2NL82 804 aaKnown RBP9.65□□□□□ -0.86
SCARB2-225ENST00000640900 SLC39A12Q504Y0 691 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 RAB41Q5JT25 222 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 RAD9BQ6WBX8 426 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 TMEM184AQ6ZMB5 413 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 CLEC20AQ6ZU45 233 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 TMEM110Q86TL2 294 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 PHF13Q86YI8 300 aaPredicted RBP9.65□□□□□ -0.86
SCARB2-225ENST00000640900 GLYCTKQ8IVS8 523 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 SCML4Q8N228 414 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 TTC9BQ8N6N2 239 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 GDPD5Q8WTR4 605 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 HDAC7Q8WUI4 952 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 SMARCD1Q96GM5 515 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 SPATA17Q96L03 361 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 HSFY1Q96LI6 401 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 C8orf48Q96LL4 319 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 CERS4Q9HA82 394 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 FAM49BQ9NUQ9 324 aa9.65□□□□□ -0.86
SCARB2-225ENST00000640900 ADAMTS1Q9UHI8 967 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms