RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 AJAP1Q9UKB5 411 aaPredicted RBP12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 COQ4Q9Y3A0 265 aa12.7□□□□□ -0.38
ERGIC3-220ENST00000640748 FANCMQ8IYD8 2048 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 KANSL1LA0AUZ9 987 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 SHISA7A6NL88 538 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 OGTO15294 1046 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 KRT86O43790 486 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 DLATP10515 647 aaKnown RBP12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 HARSP12081 509 aaKnown RBP12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 TKTP29401 623 aaKnown RBP12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 SOX5P35711 763 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 ARHGAP25P42331 645 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 MAGEA1P43355 309 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 ACOT2P49753 483 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 CLCNKBP51801 687 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 ARID5AQ03989 594 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 SOX4Q06945 474 aaPredicted RBP12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 MCL1Q07820 350 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 DRAP1Q14919 205 aaPredicted RBP12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 SURF1Q15526 300 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 UPP1Q16831 310 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 SLC5A9Q2M3M2 681 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 ASTE1Q2TB18 679 aaPredicted RBP12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 ATF7IP2Q5U623 682 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 MPZL3Q6UWV2 235 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 CRELD2Q6UXH1 353 aaPredicted RBP12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 IRF2BP2Q7Z5L9 587 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 SUMF1Q8NBK3 374 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 FBXL13Q8NEE6 735 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 DDX27Q96GQ7 796 aaKnown RBP12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 FAM81BQ96LP2 452 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 CGRRF1Q99675 332 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 KXD1Q9BQD3 176 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 GOLGA2P5Q9HBQ8 144 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 POLIQ9UNA4 740 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 PCDHA13Q9Y5I0 950 aa12.69□□□□□ -0.38
ERGIC3-220ENST00000640748 A0A0U1RQJ8 604 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 F8VZ95 297 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 I3L4J1 428 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 MEFVO15553 781 aaPredicted RBP12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 XYLBO75191 536 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 B3GAT3O94766 335 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 GFPT2O94808 682 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 TNNI1P19237 187 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 PROZP22891 400 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 CLDN10P78369 228 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 KIF5AQ12840 1032 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 MLF2Q15773 248 aaPredicted RBP12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 ARHGAP44Q17R89 818 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 DCAF4L1Q3SXM0 396 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 PABPC1LQ4VXU2 614 aaKnown RBP12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 SLC44A4Q53GD3 710 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 XKR4Q5GH76 650 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 CCDC122Q5T0U0 273 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 ALKAL1Q6UXT8 129 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 MTSS1LQ765P7 747 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 SV2AQ7L0J3 742 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 VPS36Q86VN1 386 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 GPIHBP1Q8IV16 184 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 BRSK2Q8IWQ3 736 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 KIAA2013Q8IYS2 634 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 DCLK2Q8N568 766 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 CEP120Q8N960 986 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 ATRIPQ8WXE1 791 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 ING5Q8WYH8 240 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 SHDQ96IW2 340 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 NT5C1BQ96P26 610 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 ADPGKQ9BRR6 497 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 PLA2G2FQ9BZM2 168 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 UBE2TQ9NPD8 197 aaPredicted RBP12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 TOPORSQ9NS56 1045 aaPredicted RBP12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 RAB20Q9NX57 234 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 TNFSF13BQ9Y275 285 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 BACE2Q9Y5Z0 518 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 CDY1Q9Y6F8 540 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 NCOR2Q9Y618 2525 aa12.68□□□□□ -0.38
ERGIC3-220ENST00000640748 SMIM28A0A1B0GU29 152 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 NRG2O14511 850 aaPredicted RBP12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 ABLIM1O14639 778 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 RIOK3O14730 519 aaKnown RBP12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 ZNF263O14978 683 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 TBC1D4O60343 1298 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 CD72P21854 359 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 BRCC3P46736 316 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 AP3M2P53677 418 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 MFAP3P55082 362 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 PRKCQQ04759 706 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 GFPT1Q06210 699 aaPredicted RBP12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 ENOX2Q16206 610 aaKnown RBP12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 SLC18A3Q16572 532 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 ZNF568Q3ZCX4 644 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 ZNF569Q5MCW4 686 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 C10orf76Q5T2E6 689 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 ARHGEF19Q8IW93 802 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 MYRIPQ8NFW9 859 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 SEMA4DQ92854 862 aa12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 ZMAT2Q96NC0 199 aaKnown RBP12.67□□□□□ -0.38
ERGIC3-220ENST00000640748 PDE11AQ9HCR9 933 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms