RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 NPTXRO95502 500 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 CST3P01034 146 aaPredicted RBP11.44□□□□□ -0.58
SNIP1-204ENST00000638725 EDN1P05305 212 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 DLDP09622 509 aaKnown RBP11.44□□□□□ -0.58
SNIP1-204ENST00000638725 IL1R2P27930 398 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 ETV4P43268 484 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 CPA2P48052 419 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 RTP1P59025 263 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 BASP1P80723 227 aaKnown RBP11.44□□□□□ -0.58
SNIP1-204ENST00000638725 PTK7Q13308 1070 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 PRKD1Q15139 912 aaPredicted RBP11.44□□□□□ -0.58
SNIP1-204ENST00000638725 C11orf91Q3C1V1 193 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 SYCP2LQ5T4T6 812 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 CIAPIN1Q6FI81 312 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 GPAT2Q6NUI2 795 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 IRGCQ6NXR0 463 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 LRRC74BQ6ZQY2 392 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 RFX8Q6ZV50 586 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 WDTC1Q8N5D0 677 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 TEKT4Q8WW24 435 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 RSAD2Q8WXG1 361 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 TSC22D3Q99576 134 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 XPO7Q9UIA9 1087 aaKnown RBP11.44□□□□□ -0.58
SNIP1-204ENST00000638725 ZBTB12Q9Y330 459 aaPredicted RBP11.44□□□□□ -0.58
SNIP1-204ENST00000638725 STYXL1Q9Y6J8 313 aa11.44□□□□□ -0.58
SNIP1-204ENST00000638725 CNTNAP2Q9UHC6 1331 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 DOCK5Q9H7D0 1870 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 LRRIQ4A6NIV6 560 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 E5RJQ4 531 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 H0YIN7 160 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 TBC1D12O60347 775 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 DNAJC6O75061 913 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 FESP07332 822 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 CD48P09326 243 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 DHRS4L1P0CG22 281 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 MYL2P10916 166 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 ESRRAP11474 423 aaPredicted RBP11.43□□□□□ -0.58
SNIP1-204ENST00000638725 NEK3P51956 506 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 FAAP100Q0VG06 881 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 BAATQ14032 418 aaPredicted RBP11.43□□□□□ -0.58
SNIP1-204ENST00000638725 EMC2Q15006 297 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 ARFGAP1Q8N6T3 406 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 UBR7Q8N806 425 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 TUBB6Q9BUF5 446 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 TJP2Q9UDY2 1190 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 FBXO40Q9UH90 709 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 LRCH1Q9Y2L9 728 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 MTO1Q9Y2Z2 717 aaKnown RBP11.43□□□□□ -0.58
SNIP1-204ENST00000638725 FCHO1O14526 889 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 AHCYL1O43865 530 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
SNIP1-204ENST00000638725 PSAPP07602 524 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 NR3C2P08235 984 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 PYGBP11216 843 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 GNAT1P11488 350 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 KCNA2P16389 499 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 PSMA2P25787 234 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 CALRP27797 417 aaKnown RBP11.43□□□□□ -0.58
SNIP1-204ENST00000638725 RFC1P35251 1148 aaPredicted RBP11.43□□□□□ -0.58
SNIP1-204ENST00000638725 SLC25A11Q02978 314 aaKnown RBP11.43□□□□□ -0.58
SNIP1-204ENST00000638725 SLC34A1Q06495 639 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 RNF220Q5VTB9 566 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 CCDC62Q6P9F0 684 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 ALYREFQ86V81 257 aaKnown RBP11.43□□□□□ -0.58
SNIP1-204ENST00000638725 PDIK1LQ8N165 341 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 FAM71DQ8N9W8 422 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 TMEM35BQ8NCS4 154 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 JOSD2Q8TAC2 188 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 APOPT1Q96IL0 206 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 PHACTR1Q9C0D0 580 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 NMUR2Q9GZQ4 415 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 MAP3K20Q9NYL2 800 aaKnown RBP11.43□□□□□ -0.58
SNIP1-204ENST00000638725 RIPK3Q9Y572 518 aa11.43□□□□□ -0.58
SNIP1-204ENST00000638725 CTDP1Q9Y5B0 961 aaPredicted RBP11.43□□□□□ -0.58
SNIP1-204ENST00000638725 FAM237BA0A1B0GVD1 139 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 H0YCG3 227 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 RGS20O76081 388 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 ELK3P41970 407 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 OCRLQ01968 901 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 KBTBD12Q3ZCT8 623 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 RSBN1LQ6PCB5 846 aaPredicted RBP11.42□□□□□ -0.58
SNIP1-204ENST00000638725 ZC3H18Q86VM9 953 aaKnown RBP11.42□□□□□ -0.58
SNIP1-204ENST00000638725 VSIG10LQ86VR7 867 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 CHSY1Q86X52 802 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 PDCD7Q8N8D1 485 aaKnown RBP11.42□□□□□ -0.58
SNIP1-204ENST00000638725 NIPA2Q8N8Q9 360 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 PHC3Q8NDX5 983 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 TFAP2BQ92481 460 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 STMN2Q93045 179 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 OXNAD1Q96HP4 312 aaPredicted RBP11.42□□□□□ -0.58
SNIP1-204ENST00000638725 WNK4Q96J92 1243 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 CYTH2Q99418 400 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 SH3GL3Q99963 347 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 IMPG2Q9BZV3 1241 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 SYNCQ9H7C4 482 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 ARHGEF4Q9NR80 690 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 ASB3Q9Y575 518 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 WASF2Q9Y6W5 498 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 IQANK1A0A1B0GTG1 560 aa11.42□□□□□ -0.58
SNIP1-204ENST00000638725 TCRBV9S1A1TA0A576 114 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms