RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 SPG21Q9NZD8 308 aa10.89□□□□□ -0.67
LINC00598-216ENST00000638163 TRIM10Q9UDY6 481 aa10.89□□□□□ -0.67
LINC00598-216ENST00000638163 CDC23Q9UJX2 597 aa10.89□□□□□ -0.67
LINC00598-216ENST00000638163 ANAPC7Q9UJX3 599 aa10.89□□□□□ -0.67
LINC00598-216ENST00000638163 SNX12Q9UMY4 172 aa10.89□□□□□ -0.67
LINC00598-216ENST00000638163 PRG3Q9Y2Y8 225 aaPredicted RBP10.89□□□□□ -0.67
LINC00598-216ENST00000638163 BACE2Q9Y5Z0 518 aa10.89□□□□□ -0.67
LINC00598-216ENST00000638163 DUSP10Q9Y6W6 482 aa10.89□□□□□ -0.67
LINC00598-216ENST00000638163 PSTPIP1O43586 416 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 BUB1O43683 1085 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 SPOPO43791 374 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 BUB1BO60566 1050 aaPredicted RBP10.88□□□□□ -0.67
LINC00598-216ENST00000638163 URI1O94763 535 aaPredicted RBP10.88□□□□□ -0.67
LINC00598-216ENST00000638163 PROSCO94903 275 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 GJB5O95377 273 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 C1RP00736 705 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 PDGFRBP09619 1106 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 KRT3P12035 628 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 LMO2P25791 158 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 SCN1AP35498 2009 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 PAFAH1B1P43034 410 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 SLC11A1P49279 550 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 PSMC1P62191 440 aaKnown RBP10.88□□□□□ -0.67
LINC00598-216ENST00000638163 HTRA4P83105 476 aaPredicted RBP10.88□□□□□ -0.67
LINC00598-216ENST00000638163 PPP2R5EQ16537 467 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 PTPN20Q4JDL3 420 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 CTXN3Q4LDR2 81 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 MDH1BQ5I0G3 518 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 SPOUT1Q5T280 376 aaKnown RBP10.88□□□□□ -0.67
LINC00598-216ENST00000638163 SCARA3Q6AZY7 606 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 KCNT2Q6UVM3 1135 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 CD300LGQ6UXG3 332 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC00598-216ENST00000638163 BEND5Q7L4P6 421 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 SLC26A9Q7LBE3 791 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 POLNQ7Z5Q5 900 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 FAM35AQ86V20 835 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 OSTM1Q86WC4 334 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 XYLT1Q86Y38 959 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 GPIHBP1Q8IV16 184 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 FUKQ8N0W3 1084 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 SIX6OS1Q8N1H7 587 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 C12orf29Q8N999 325 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 MAIP1Q8WWC4 291 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 PIK3R5Q8WYR1 880 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 ELMO3Q96BJ8 720 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 PCED1BQ96HM7 432 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 IGSF21Q96ID5 467 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 SAMD11Q96NU1 681 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 RAD9AQ99638 391 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 ZSWIM1Q9BR11 485 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 PAAF1Q9BRP4 392 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 ZCWPW1Q9H0M4 648 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 LRRC4Q9HBW1 653 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 ST7Q9NRC1 585 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 KRT82Q9NSB4 513 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 FAM49BQ9NUQ9 324 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 MARCH5Q9NX47 278 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 DNAJB4Q9UDY4 337 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 LZTS1Q9Y250 596 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 PCDHB5Q9Y5E4 795 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 MRFAP1Q9Y605 127 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 SLC4A7Q9Y6M7 1214 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 TRIP11Q15643 1979 aa10.88□□□□□ -0.67
LINC00598-216ENST00000638163 TMEM191CA6NGB0 347 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 ZBBXA8MT70 800 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 HSF2BPO75031 334 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 RNF8O76064 485 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 UPP2O95045 317 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 EFEMP2O95967 443 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 SOD2P04179 222 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 CTNNA2P26232 953 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 CTNNA1P35221 906 aaKnown RBP10.87□□□□□ -0.67
LINC00598-216ENST00000638163 BRCC3P46736 316 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 SLC6A3Q01959 620 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 PDE4CQ08493 712 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 MTA1Q13330 715 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 HADHQ16836 314 aaKnown RBP10.87□□□□□ -0.67
LINC00598-216ENST00000638163 VARS2Q5ST30 1063 aaKnown RBP10.87□□□□□ -0.67
LINC00598-216ENST00000638163 PPP1R15BQ5SWA1 713 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 CCDC181Q5TID7 509 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 FAM171A1Q5VUB5 890 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 TPGS2Q68CL5 300 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 KIAA1841Q6NSI8 718 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 CCDC70Q6NSX1 233 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 RTL10Q7L3V2 364 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 DDX53Q86TM3 631 aaKnown RBP10.87□□□□□ -0.67
LINC00598-216ENST00000638163 NT5DC3Q86UY8 548 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 TTC30AQ86WT1 665 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 RHOT1Q8IXI2 618 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 RNF168Q8IYW5 571 aaPredicted RBP10.87□□□□□ -0.67
LINC00598-216ENST00000638163 C7orf61Q8IZ16 206 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 SLC39A11Q8N1S5 342 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 ARHGAP18Q8N392 663 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 FIBCD1Q8N539 461 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 WDTC1Q8N5D0 677 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 BADQ92934 168 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 CLP1Q92989 425 aaKnown RBP10.87□□□□□ -0.67
LINC00598-216ENST00000638163 VWCEQ96DN2 955 aa10.87□□□□□ -0.67
LINC00598-216ENST00000638163 ARHGEF26Q96DR7 871 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms