RNA–Protein interactions for RNA: ENST00000638075.1

EFHC1-238, Transcript of EF-hand domain containing 1, human

TSL 4

Gene EFHC1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFHC1-238	ENST00000638075	PSMC1	P62191	440 aa	Known RBP	10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	CSTF1	Q05048	431 aa	Known RBP	10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	ZNF268	Q14587	947 aa	Predicted RBP	10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	WDR44	Q5JSH3	913 aa		10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	ZC3H14	Q6PJT7	736 aa	Known RBP	10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	VSTM1	Q6UX27	236 aa		10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	ADSSL1	Q8N142	457 aa		10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	ZBTB44	Q8NCP5	570 aa		10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	MRPS31	Q92665	395 aa	Known RBP	10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	USP13	Q92995	863 aa	Predicted RBP	10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	SYAP1	Q96A49	352 aa	Predicted RBP	10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	PCED1B	Q96HM7	432 aa		10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	IER2	Q9BTL4	223 aa		10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	VRTN	Q9H8Y1	702 aa		10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	PRMT8	Q9NR22	394 aa	Predicted RBP	10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	GKN1	Q9NS71	199 aa		10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	THG1L	Q9NWX6	298 aa	Known RBP	10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	CCL26	Q9Y258	94 aa		10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	OTOGL	Q3ZCN5	2332 aa		10.86	□□□□□ -0.67
EFHC1-238	ENST00000638075	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	IKBKB	O14920	756 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	LILRB5	O75023	590 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	RHOBTB3	O94955	611 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	NR3C1	P04150	777 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	TDGF1	P13385	188 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	PTPN1	P18031	435 aa	Known RBP	10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	BDNF	P23560	247 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	CTH	P32929	405 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	SOX9	P48436	509 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	DLG4	P78352	724 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	TNK2	Q07912	1038 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	DPYD	Q12882	1025 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	TRPC3	Q13507	836 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	GAS6	Q14393	721 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	ITPRIPL2	Q3MIP1	535 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	TDRD10	Q5VZ19	366 aa	Known RBP	10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	TXNDC11	Q6PKC3	985 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	SCN4B	Q8IWT1	228 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	SUMF1	Q8NBK3	374 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	OR6B3	Q8NGW1	331 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	TMC2	Q8TDI7	906 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	MYLPF	Q96A32	169 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	SLC22A12	Q96S37	553 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	CYP2S1	Q96SQ9	504 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	FAM126A	Q9BYI3	521 aa	Predicted RBP	10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	SNX25	Q9H3E2	840 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	ZSCAN32	Q9NX65	697 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	TRAF3IP3	Q9Y228	551 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	PCDHGA2	Q9Y5H1	932 aa		10.85	□□□□□ -0.67
EFHC1-238	ENST00000638075	OTOL1	A6NHN0	477 aa	Predicted RBP	10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	PHACTR2	O75167	634 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	ZNF202	O95125	648 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	VNN1	O95497	513 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	PRR29	P0C7W0	189 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	GRIK1	P39086	918 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	MCCD1	P59942	119 aa	Predicted RBP	10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	TNNC1	P63316	161 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	NOP14	P78316	857 aa	Known RBP	10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	CYP27A1	Q02318	531 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	RUNX3	Q13761	415 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	NCOA4	Q13772	614 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	KCNB1	Q14721	858 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	NFIL3	Q16649	462 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	ZACN	Q401N2	412 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	MDH1B	Q5I0G3	518 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	C1orf220	Q5T0J3	134 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	TSSK4	Q6SA08	328 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	KRBA2	Q6ZNG9	492 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	TTC8	Q8TAM2	541 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	RIN3	Q8TB24	985 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	C8orf48	Q96LL4	319 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	TTLL2	Q9BWV7	592 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	GOLPH3L	Q9H4A5	285 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	DPEP3	Q9H4B8	488 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	KIF9	Q9HAQ2	790 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	HPS4	Q9NQG7	708 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	GCNT4	Q9P109	453 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	NXF1	Q9UBU9	619 aa	Known RBP	10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	GPR179	Q6PRD1	2367 aa		10.84	□□□□□ -0.67
EFHC1-238	ENST00000638075	C2orf78	A6NCI8	922 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075		A8MXQ7	604 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075		F8VP50	259 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	TRIM66	O15016	1216 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	MAPK13	O15264	365 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	KIN	O60870	393 aa	Known RBP	10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	KIF20A	O95235	890 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	USP17L7	P0C7H9	530 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	TCF3	P15923	654 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	PFKL	P17858	780 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	CXCL12	P48061	93 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	CCR3	P51677	355 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	CDH8	P55286	799 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	USP46	P62068	366 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	FAM160A1	Q05DH4	1040 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	BIRC3	Q13489	604 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	CCIN	Q13939	588 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	LRRC32	Q14392	662 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	PON2	Q15165	354 aa		10.83	□□□□□ -0.68
EFHC1-238	ENST00000638075	SGSM1	Q2NKQ1	1148 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms