RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 CBFA2T3O75081 653 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 CNOT3O75175 753 aaKnown RBP11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 ALADP13716 330 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 LCP1P13796 627 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 ATP6V1C1P21283 382 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 ARPP19P56211 112 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 MTFR1Q15390 333 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 CCNG2Q16589 344 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 SPDYE7PQ495Y7 208 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 AGAP9Q5VTM2 703 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 ARMC3Q5W041 872 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 CDH24Q86UP0 819 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 ATPAF2Q8N5M1 289 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 OR6Y1Q8NGX8 325 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 LENG1Q96BZ8 264 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 CD274Q9NZQ7 290 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 KLHL3Q9UH77 587 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 PDE9AO76083 593 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 GH2P01242 217 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 HIST1H2AGP0C0S8 130 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 HIST1H2ADP20671 130 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 FOXO4P98177 505 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 TBCELQ5QJ74 424 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 SWSAP1Q6NVH7 229 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 TTC27Q6P3X3 843 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 ANKS3Q6ZW76 656 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 NANOGNBQ7Z5D8 188 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 DLG3Q92796 817 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 ZNF669Q96BR6 464 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 HIST1H2AHQ96KK5 128 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 HIST1H2AJQ99878 128 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 APOL4Q9BPW4 351 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 H2AFJQ9BTM1 129 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 CYLDQ9NQC7 956 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 LMCD1Q9NZU5 365 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 AFF4Q9UHB7 1163 aaKnown RBP11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 ARIH2O95376 493 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 NCOA4Q13772 614 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 PRCCQ92733 491 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 ZNF512BQ96KM6 892 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 DCUN1D5Q9BTE7 237 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 STARD13Q9Y3M8 1113 aa11.72□□□□□ -0.53
SMARCA2-258ENST00000637103 NCKAP1LP55160 1127 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 MCL1Q07820 350 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 NDUFA5Q16718 116 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 PKN3Q6P5Z2 889 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 DAGLBQ8NCG7 672 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 VPS37AQ8NEZ2 397 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 MAGEC3Q8TD91 643 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 TRPC4APQ8TEL6 797 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 VPS33AQ96AX1 596 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 ABHD8Q96I13 439 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 SEMA4AQ9H3S1 761 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 ZNF408Q9H9D4 720 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 HPS5Q9UPZ3 1129 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 PRPF4O43172 522 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 NDUFS3O75489 264 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 RECQLP46063 649 aaPredicted RBP11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 MAPRE1Q15691 268 aaKnown RBP11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 PKN2Q16513 984 aaKnown RBP11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 TTI2Q6NXR4 508 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 CCDC149Q6ZUS6 474 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 TDRD5Q8NAT2 981 aaKnown RBP11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 NAT9Q9BTE0 207 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 SFMBT1Q9UHJ3 866 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 EIF3LQ9Y262 564 aaKnown RBP11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 E2F8A0AVK6 867 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 MFN2O95140 757 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 LCA5LO95447 670 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 GZMAP12544 262 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 PRDX5P30044 214 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 SOX11P35716 441 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 SLC45A4Q5BKX6 768 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 CLEC4MQ9H2X3 399 aaPredicted RBP11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 KLHL31Q9H511 634 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 WDR70Q9NW82 654 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 STK39Q9UEW8 545 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 PCDHA10Q9Y5I2 948 aa11.71□□□□□ -0.53
SMARCA2-258ENST00000637103 CNTNAP5Q8WYK1 1306 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 PNPLA6Q8IY17 1366 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 TULP2O00295 520 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 SOAT2O75908 522 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 SMNDC1O75940 238 aaKnown RBP eCLIP11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 FAM153BP0C7A2 387 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 PTGER2P43116 358 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 SF3B3Q15393 1217 aaKnown RBP11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 FAM153CQ494X1 144 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 ATG9AQ7Z3C6 839 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 MREGQ8N565 214 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 EFHBQ8N7U6 833 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 PACSIN1Q9BY11 444 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 ARHGAP20Q9P2F6 1191 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 LRFN2Q9ULH4 789 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 MAP3K4Q9Y6R4 1608 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 EFCAB6Q5THR3 1501 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 INO80Q9ULG1 1556 aaPredicted RBP11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 UNC5CO95185 931 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 ASNSP08243 561 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 ERVK-9P63128 1117 aa11.71□□□□□ -0.54
SMARCA2-258ENST00000637103 ITGB3BPQ13352 177 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms