RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	CTC1	Q2NKJ3	1217 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TSNAXIP1	Q2TAA8	658 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	DENND1B	Q6P3S1	775 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	FAM151A	Q8WW52	585 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RBM41	Q96IZ5	413 aa	Known RBP	13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	FBXL18	Q96ME1	805 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	THTPA	Q9BU02	230 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	IQCG	Q9H095	443 aa	Known RBP	13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RNF19A	Q9NV58	838 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SLC17A6	Q9P2U8	582 aa		13.66	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PRPF4	O43172	522 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SORBS2	O94875	1100 aa	Known RBP	13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MUT	P22033	750 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MMP8	P22894	467 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SP2	Q02086	613 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	KLC1	Q07866	573 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PEX6	Q13608	980 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	OASL	Q15646	514 aa	Known RBP	13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	WDTC1	Q8N5D0	677 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CFAP61	Q8NHU2	1237 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	TRIM11	Q96F44	468 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	IMPG2	Q9BZV3	1241 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ACSS2	Q9NR19	701 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CISH	Q9NSE2	258 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ZNRF3	Q9ULT6	936 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SCIN	Q9Y6U3	715 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	STAM2	O75886	525 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	INHBA	P08476	426 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	RBP3	P10745	1247 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ATP6V1C1	P21283	382 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PGM1	P36871	562 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	EIF3E	P60228	445 aa	Known RBP	13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ACTR2	P61160	394 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	GRIK3	Q13003	919 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	EMC2	Q15006	297 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MORF4L2	Q15014	288 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PARP6	Q2NL67	630 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	BSPRY	Q5W0U4	402 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SNRNP48	Q6IEG0	339 aa	Known RBP	13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	KBTBD2	Q8IY47	623 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	LRRC71	Q8N4P6	559 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	KCTD17	Q8N5Z5	321 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	ARFGAP1	Q8N6T3	406 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	POU5F2	Q8N7G0	328 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	SPATA18	Q8TC71	538 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	CCDC124	Q96CT7	223 aa	Known RBP	13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	PGLYRP2	Q96PD5	576 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	BTBD10	Q9BSF8	475 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033	MAD1L1	Q9Y6D9	718 aa		13.65	□□□□□ -0.22
CHRNA7-223	ENST00000637033		A0A1B0GVG6	124 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	CXorf49	A8MYA2	514 aa	Predicted RBP	13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	FCHO1	O14526	889 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	RGS20	O76081	388 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	KRT3	P12035	628 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	SKIV2L2	P42285	1042 aa	Known RBP	13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	PSMC1	P62191	440 aa	Known RBP	13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	SARNP	P82979	210 aa	Known RBP	13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	TMPRSS15	P98073	1019 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	DARS2	Q6PI48	645 aa	Known RBP	13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	MCF2L2	Q86YR7	1114 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	PDIK1L	Q8N165	341 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	ATP11C	Q8NB49	1132 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	UBA3	Q8TBC4	463 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	TTC25	Q96NG3	672 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	IL1RAPL1	Q9NZN1	696 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	C2CD2	Q9Y426	696 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	LRRC42	Q9Y546	428 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	ACTL7B	Q9Y614	415 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	CNTNAP1	P78357	1384 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	TCRBV9S1A1T	A0A576	114 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	TRIM49D1	C9J1S8	452 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033		H7C0C1	242 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	C2CD2L	O14523	706 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	LUC7L3	O95232	432 aa	Known RBP	13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	ATP5O	P48047	213 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	JAK3	P52333	1124 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	KRT76	Q01546	638 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	CCDC15	Q0P6D6	951 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	UBAP2L	Q14157	1087 aa	Known RBP	13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	MROH9	Q5TGP6	573 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	CCDC62	Q6P9F0	684 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	TREML1	Q86YW5	311 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	NSL1	Q96IY1	281 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	MAGEB5	Q9BZ81	275 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	JPH1	Q9HDC5	661 aa	Predicted RBP	13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	CYTH4	Q9UIA0	394 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	CCDC22	O60826	627 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	APBA3	O96018	575 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	LMNB2	Q03252	620 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	RASA2	Q15283	850 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	SLC45A4	Q5BKX6	768 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	UNC5B	Q8IZJ1	945 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	DCLRE1B	Q9H816	532 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	KCNK13	Q9HB14	408 aa		13.64	□□□□□ -0.23
CHRNA7-223	ENST00000637033	FOCAD	Q5VW36	1801 aa		13.63	□□□□□ -0.23
CHRNA7-223	ENST00000637033		A6NHS1	94 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms