RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 TSEN2Q8NCE0 465 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-231ENST00000636816 ATG4AQ8WYN0 398 aa16.72■□□□□ 0.27
CACNA1A-231ENST00000636816 TSEN34Q9BSV6 310 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-231ENST00000636816 B3GNT5Q9BYG0 378 aa16.72■□□□□ 0.27
CACNA1A-231ENST00000636816 RAB6CQ9H0N0 254 aa16.72■□□□□ 0.27
CACNA1A-231ENST00000636816 STARD7Q9NQZ5 370 aa16.72■□□□□ 0.27
CACNA1A-231ENST00000636816 CHST7Q9NS84 486 aa16.72■□□□□ 0.27
CACNA1A-231ENST00000636816 MTUS1Q9ULD2 1270 aa16.72■□□□□ 0.27
CACNA1A-231ENST00000636816 HPCAL4Q9UM19 191 aa16.72■□□□□ 0.27
CACNA1A-231ENST00000636816 R3HDM2Q9Y2K5 976 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-231ENST00000636816 TRIM17Q9Y577 477 aa16.72■□□□□ 0.27
CACNA1A-231ENST00000636816 KRT10P13645 584 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 IL1R2P27930 398 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 COILP38432 576 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 SH3PXD2AQ5TCZ1 1133 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 JAMLQ86YT9 394 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 SLC43A3Q8NBI5 491 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 EXD1Q8NHP7 514 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 IPO4Q8TEX9 1081 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 RAPGEF5Q92565 580 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 SENP8Q96LD8 212 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 FAM118BQ9BPY3 351 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 PLVAPQ9BX97 442 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 SLC4A5Q9BY07 1137 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 SLC38A7Q9NVC3 462 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 TIMM13Q9Y5L4 95 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 TDRD15B5MCY1 1934 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 H3BQF6 201 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 PODXLO00592 558 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 LRCH4O75427 683 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 WARSP23381 471 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 TKTP29401 623 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 KLF1Q13351 362 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 HLTFQ14527 1009 aaKnown RBP eCLIP16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 PPP2R5EQ16537 467 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 ZFYVE27Q5T4F4 411 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 KIAA0319Q5VV43 1072 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 TOP6BLQ8N6T0 577 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 SLC2A14Q8TDB8 520 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 CAVIN3Q969G5 261 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 TRAIPQ9BWF2 469 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 OSBPL8Q9BZF1 889 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 ZWILCHQ9H900 591 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 RSAD1Q9HA92 442 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 HESX1Q9UBX0 185 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 PCYOX1Q9UHG3 505 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 PTPN22Q9Y2R2 807 aa16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 UTP11Q9Y3A2 253 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-231ENST00000636816 CLDN5O00501 218 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 KRT1P04264 644 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 KCNT1Q5JUK3 1230 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 DUPD1Q68J44 220 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 EMBQ6PCB8 327 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 MFSD7Q6UXD7 560 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 TMEM110Q86TL2 294 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 RXFP2Q8WXD0 754 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 SEC14L1Q92503 715 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 KHSRPQ92945 711 aaKnown RBP eCLIP16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 SLITRK1Q96PX8 696 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 ERP44Q9BS26 406 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 MIS12Q9H081 205 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 LRRC19Q9H756 370 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 PCSK1NQ9UHG2 260 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 INPP5FQ9Y2H2 1132 aa16.7■□□□□ 0.26
CACNA1A-231ENST00000636816 I3L4J1 428 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 PAPSS1O43252 624 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 FLT3P36888 993 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 SLC25A11Q02978 314 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 DHX34Q14147 1143 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 SMTNL2Q2TAL5 461 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 PAN2Q504Q3 1202 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 LRRC38Q5VT99 294 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 KAZNQ674X7 775 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 OLFML1Q6UWY5 402 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 CCDC105Q8IYK2 499 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 RCOR2Q8IZ40 523 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 C12orf50Q8NA57 414 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 ANKRD52Q8NB46 1076 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 B3GALNT2Q8NCR0 500 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 FNIP1Q8TF40 1166 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 CLEC4CQ8WTT0 213 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 UNC93B1Q9H1C4 597 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 SNX24Q9Y343 169 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 FAM187AA6NFU0 413 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 GABRDO14764 452 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 YY1P25490 414 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 RAB27AP51159 221 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 CUL1Q13616 776 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 UPP1Q16831 310 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 C15orf59Q2T9L4 293 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 ECHDC2Q86YB7 292 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 DCLK3Q9C098 648 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 LCMT1Q9UIC8 334 aa16.69■□□□□ 0.26
CACNA1A-231ENST00000636816 C2CD4BA6NLJ0 364 aa16.68■□□□□ 0.26
CACNA1A-231ENST00000636816 ARVCFO00192 962 aa16.68■□□□□ 0.26
CACNA1A-231ENST00000636816 SETSIPP0DME0 302 aa16.68■□□□□ 0.26
CACNA1A-231ENST00000636816 PTPN1P18031 435 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-231ENST00000636816 OAS2P29728 719 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms