RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 LCLAT1Q6UWP7 414 aa11.29□□□□□ -0.6
CLN5-213ENST00000636681 CLEC20AQ6ZU45 233 aa11.29□□□□□ -0.6
CLN5-213ENST00000636681 ADGRD2Q7Z7M1 963 aa11.29□□□□□ -0.6
CLN5-213ENST00000636681 ARHGEF26Q96DR7 871 aa11.29□□□□□ -0.6
CLN5-213ENST00000636681 TNIP3Q96KP6 325 aa11.29□□□□□ -0.6
CLN5-213ENST00000636681 TCF25Q9BQ70 676 aa11.29□□□□□ -0.6
CLN5-213ENST00000636681 LACRTQ9GZZ8 138 aa11.29□□□□□ -0.6
CLN5-213ENST00000636681 PDCL3Q9H2J4 239 aa11.29□□□□□ -0.6
CLN5-213ENST00000636681 KRT82Q9NSB4 513 aa11.29□□□□□ -0.6
CLN5-213ENST00000636681 TRMT1Q9NXH9 659 aaKnown RBP11.29□□□□□ -0.6
CLN5-213ENST00000636681 MSRAQ9UJ68 235 aa11.29□□□□□ -0.6
CLN5-213ENST00000636681 ADGRG1Q9Y653 693 aa11.29□□□□□ -0.6
CLN5-213ENST00000636681 DUSP10Q9Y6W6 482 aa11.29□□□□□ -0.6
CLN5-213ENST00000636681 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.28□□□□□ -0.6
CLN5-213ENST00000636681 MTMR11A4FU01 709 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 ARHGAP6O43182 974 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 URODP06132 367 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 FAM163BP0C2L3 166 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 CTSAP10619 480 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 ABCB4P21439 1286 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 TSPY1Q01534 308 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 BMS1Q14692 1282 aaKnown RBP11.28□□□□□ -0.6
CLN5-213ENST00000636681 SLC18A3Q16572 532 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 ARHGAP17Q68EM7 881 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 ALKBH5Q6P6C2 394 aaKnown RBP11.28□□□□□ -0.6
CLN5-213ENST00000636681 ANKS3Q6ZW76 656 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 CLEC4CQ8WTT0 213 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 PIWIL1Q96J94 861 aaKnown RBP11.28□□□□□ -0.6
CLN5-213ENST00000636681 CPXM1Q96SM3 734 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 HNRNPABQ99729 332 aaKnown RBP11.28□□□□□ -0.6
CLN5-213ENST00000636681 SLC28A3Q9HAS3 691 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 ENTPD7Q9NQZ7 604 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 PCDHGC3Q9UN70 934 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 BZW2Q9Y6E2 419 aaKnown RBP11.28□□□□□ -0.6
CLN5-213ENST00000636681 EIF3CLB5ME19 914 aaKnown RBP11.28□□□□□ -0.6
CLN5-213ENST00000636681 H3BNC9 293 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 PER2O15055 1255 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 AP1G2O75843 785 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 LCA5LO95447 670 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 FTLP02792 175 aaPredicted RBP11.28□□□□□ -0.6
CLN5-213ENST00000636681 PAX3P23760 479 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 GTF2F1P35269 517 aaKnown RBP eCLIP11.28□□□□□ -0.6
CLN5-213ENST00000636681 NDUFV1P49821 464 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 GALCP54803 685 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 ADCY1Q08828 1119 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 PTP4A2Q12974 167 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 DUSP4Q13115 394 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 DDR2Q16832 855 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 PTPN20Q4JDL3 420 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 MMS22LQ6ZRQ5 1243 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 TTC39CQ8N584 583 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 CCDC112Q8NEF3 446 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 TIFAQ96CG3 184 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 EIF3CQ99613 913 aaKnown RBP11.28□□□□□ -0.6
CLN5-213ENST00000636681 C11orf70Q9BRQ4 267 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 MRPL17Q9NRX2 175 aaKnown RBP11.28□□□□□ -0.6
CLN5-213ENST00000636681 SALL4Q9UJQ4 1053 aa11.28□□□□□ -0.6
CLN5-213ENST00000636681 OBSL1O75147 1896 aa11.27□□□□□ -0.6
CLN5-213ENST00000636681 C2orf71A6NGG8 1288 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 OR6C75A6NL08 312 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 HHLA1C9JL84 531 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 F8VP50 259 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 H7C4K7 107 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 LPXNO60711 386 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 ERBB2P04626 1255 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 CCDC172P0C7W6 258 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 CYLC1P35663 651 aaPredicted RBP11.27□□□□□ -0.61
CLN5-213ENST00000636681 GPR17Q13304 367 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 MTMR3Q13615 1198 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 RAB30Q15771 203 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 SLC8B1Q6J4K2 584 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 RBM23Q86U06 439 aaKnown RBP11.27□□□□□ -0.61
CLN5-213ENST00000636681 ZNF677Q86XU0 584 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 SPATA2LQ8IUW3 424 aaPredicted RBP11.27□□□□□ -0.61
CLN5-213ENST00000636681 SCN4BQ8IWT1 228 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 ANKRD52Q8NB46 1076 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 SPATA18Q8TC71 538 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 MICAL1Q8TDZ2 1067 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 SLC35F5Q8WV83 523 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 PLVAPQ9BX97 442 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 DUSP16Q9BY84 665 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 THAP2Q9H0W7 228 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 TLR9Q9NR96 1032 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 ST7Q9NRC1 585 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 KIAA1257Q9ULG3 409 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 PCDHA13Q9Y5I0 950 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 BACE2Q9Y5Z0 518 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 BRWD1Q9NSI6 2320 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 ANAPC1Q9H1A4 1944 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 NOTCH4Q99466 2003 aa11.27□□□□□ -0.61
CLN5-213ENST00000636681 C2orf16Q68DN1 1984 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 ARHGEF37A1IGU5 675 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 E5RJQ4 531 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 FSCN2O14926 492 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 MED7O43513 233 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 LCP1P13796 627 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 CDH5P33151 784 aaPredicted RBP11.26□□□□□ -0.61
CLN5-213ENST00000636681 MAGEA1P43355 309 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 PGFP49763 221 aa11.26□□□□□ -0.61
CLN5-213ENST00000636681 CENPCQ03188 943 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms