RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TSPAN17Q96FV3 270 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 SOX10P56693 466 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 SFSWAPQ12872 951 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 ZNF284Q2VY69 593 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 C11orf88Q6PI97 169 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 PARGQ86W56 976 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 ZNF669Q96BR6 464 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 IARS2Q9NSE4 1012 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 UBTFL6P0CB48 400 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 PRPF39Q86UA1 669 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 SEPT1Q8WYJ6 367 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 ACOX2Q99424 681 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 ADI1Q9BV57 179 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 NT5MQ9NPB1 228 aa18.51■□□□□ 0.55
CACNA1A-227ENST00000636549 MYBL1P10243 752 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 DGKKQ5KSL6 1271 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 LRRC74BQ6ZQY2 392 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 ELL3Q9HB65 397 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 SLC38A7Q9NVC3 462 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 IMPAD1Q9NX62 359 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 ERBB4Q15303 1308 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 IGSF1Q8N6C5 1336 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 FAM135BQ49AJ0 1406 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 C2orf81A6NN90 581 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 EVPLLA8MZ36 301 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 TEX28O15482 410 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 RABGAP1LQ5R372 815 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 MAP1SQ66K74 1059 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 TBC1D16Q8TBP0 767 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 GPSM3Q9Y4H4 160 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 A0A1W2PQ27 194 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 A0A1W2PQ64 194 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 A0A1W2PQD8 194 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 DLGAP3O95886 979 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 CDC25BP30305 580 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 BOP1Q14137 746 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 CHI3L2Q15782 390 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 SYTL5Q8TDW5 730 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 CCNT2O60583 730 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 RTN2O75298 545 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 GARTP22102 1010 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 RGS2P41220 211 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 MYCBPQ99417 103 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 IFNA16P05015 189 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 GPD1P21695 349 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 CCDC15Q0P6D6 951 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 STX3Q13277 289 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 C3orf62Q6ZUJ4 267 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 BRSK2Q8IWQ3 736 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 PTPRTO14522 1441 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 EFNA5P52803 228 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 FAM20AQ96MK3 541 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 SH3BP4Q9P0V3 963 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 SIK3Q9Y2K2 1263 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 PCDHB9Q9Y5E1 797 aa18.5■□□□□ 0.55
CACNA1A-227ENST00000636549 PHLPP2Q6ZVD8 1323 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 FAM205CA6NFA0 338 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 TRDMT1O14717 391 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 NPEPPSP55786 919 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 RHOAP61586 193 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 PPP2R2AP63151 447 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 GRIN3AQ8TCU5 1115 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 TADA1Q96BN2 335 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 OPTNQ96CV9 577 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 CNDP1Q96KN2 507 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 ZMYM5Q9UJ78 669 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 NUDT5Q9UKK9 219 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 CCDC103Q8IW40 242 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 TEX13BQ9BXU2 312 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 GPR108Q9NPR9 543 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 MGAT4DA6NG13 374 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 FAM25AB3EWG3 89 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 FAM25CB3EWG5 89 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 FAM25GB3EWG6 89 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 VSNL1P62760 191 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 EPS8Q12929 822 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 MAPRE2Q15555 327 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 CELF6Q96J87 481 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 GID8Q9NWU2 228 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 CHGBP05060 677 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 PRKAA1Q13131 559 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 TFR2Q9UP52 801 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 SUPT7LO94864 414 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 EPHX2P34913 555 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 SRBD1Q8N5C6 995 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 TFB1MQ8WVM0 346 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 HDHD2Q9H0R4 259 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 CYP39A1Q9NYL5 469 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 ERAP1Q9NZ08 941 aa18.49■□□□□ 0.55
CACNA1A-227ENST00000636549 IFRD1O00458 451 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 RHOCP08134 193 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 CYP2F1P24903 491 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 RUNX1T1Q06455 604 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 BTG3Q14201 252 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 ARHGEF26Q96DR7 871 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 GPRC5CQ9NQ84 441 aa18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 NOP53Q9NZM5 478 aaKnown RBP18.48■□□□□ 0.55
CACNA1A-227ENST00000636549 ERI2A8K979 691 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms