RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 NDUFS2O75306 463 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 SUN1O94901 812 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 ZBED1O96006 694 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 NHLRC4P0CG21 123 aaPredicted RBP3.9□□□□□ -1.79
VPS8-228ENST00000628962 PRR23D2P0DMB1 279 aaPredicted RBP3.9□□□□□ -1.79
VPS8-228ENST00000628962 GSPT1P15170 499 aaKnown RBP3.9□□□□□ -1.79
VPS8-228ENST00000628962 SERPINB3P29508 390 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 CCKARP32238 428 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 CCT8P50990 548 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 ANXA11P50995 505 aaKnown RBP3.9□□□□□ -1.79
VPS8-228ENST00000628962 SLC5A3P53794 718 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 AK2P54819 239 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 POU5F1BQ06416 359 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 CHAF1AQ13111 956 aaPredicted RBP3.9□□□□□ -1.79
VPS8-228ENST00000628962 HLXQ14774 488 aaPredicted RBP3.9□□□□□ -1.79
VPS8-228ENST00000628962 ZNF260Q3ZCT1 412 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 CEP78Q5JTW2 689 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 ATAT1Q5SQI0 421 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 ERAP2Q6P179 960 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 TOGARAM2Q6ZUX3 1019 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 SRLQ86TD4 932 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 KRT73Q86Y46 540 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 FAM186BQ8IYM0 893 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 PAF1Q8N7H5 531 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 ANKRD42Q8N9B4 389 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 MYRIPQ8NFW9 859 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 NLGN4YQ8NFZ3 816 aaPredicted RBP3.9□□□□□ -1.79
VPS8-228ENST00000628962 CCHCR1Q8TD31 782 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 DIS3LQ8TF46 1054 aaKnown RBP3.9□□□□□ -1.79
VPS8-228ENST00000628962 SNX19Q92543 992 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 HPS3Q969F9 1004 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 ACO2Q99798 780 aaKnown RBP3.9□□□□□ -1.79
VPS8-228ENST00000628962 SH2D3AQ9BRG2 576 aa3.9□□□□□ -1.79
VPS8-228ENST00000628962 GTPBP4Q9BZE4 634 aaKnown RBP3.9□□□□□ -1.79
VPS8-228ENST00000628962 ZNF277Q9NRM2 450 aaPredicted RBP3.9□□□□□ -1.79
VPS8-228ENST00000628962 CEP170Q5SW79 1584 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 SOGA1O94964 1423 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 TISP43B9A030 160 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 TBX3O15119 743 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 PQBP1O60828 265 aaKnown RBP3.89□□□□□ -1.79
VPS8-228ENST00000628962 POU2F2P09086 479 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 CYP2D6P10635 497 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 DDCP20711 480 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 MTNR1BP49286 362 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 PPM1FP49593 454 aaPredicted RBP3.89□□□□□ -1.79
VPS8-228ENST00000628962 SLC16A1P53985 500 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 FAM193AP78312 1265 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 MC2RQ01718 297 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 KIAA0753Q2KHM9 967 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 XRRA1Q6P2D8 792 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 SLC2A7Q6PXP3 512 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 DENND1CQ8IV53 801 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 CPXCR1Q8N123 301 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 PPM1NQ8N819 430 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 B3GALNT2Q8NCR0 500 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 FAM156AQ8NDB6 213 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.89□□□□□ -1.79
VPS8-228ENST00000628962 REPS1Q96D71 796 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 MVB12AQ96EY5 273 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 HMCESQ96FZ2 354 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 LRIG1Q96JA1 1093 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 SLC2A13Q96QE2 648 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 TMEM79Q9BSE2 394 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 ADI1Q9BV57 179 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 MAF1Q9H063 256 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 TUBA8Q9NY65 449 aaPredicted RBP3.89□□□□□ -1.79
VPS8-228ENST00000628962 PNMA2Q9UL42 364 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 CDYLQ9Y232 598 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 PCDHB1Q9Y5F3 818 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 PCDHGB6Q9Y5F9 930 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 PTPRMP28827 1452 aa3.89□□□□□ -1.79
VPS8-228ENST00000628962 TOP2BQ02880 1626 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 TSPOAP1O95153 1857 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 POLA1P09884 1462 aaPredicted RBP3.88□□□□□ -1.79
VPS8-228ENST00000628962 MAGI1Q96QZ7 1491 aaPredicted RBP3.88□□□□□ -1.79
VPS8-228ENST00000628962 CCDC187A0A096LP49 1063 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 A6NNZ2 444 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 FAM171A2A8MVW0 826 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 AGFG2O95081 481 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 FGAP02671 866 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 HRGP04196 525 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 TUBB4AP04350 444 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 SETSIPP0DME0 302 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 ZNF134P52741 427 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 ZNF844Q08AG5 666 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 IFIT5Q13325 482 aaKnown RBP3.88□□□□□ -1.79
VPS8-228ENST00000628962 PGS1Q32NB8 556 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 TMEM95Q3KNT9 176 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 PREPLQ4J6C6 727 aaPredicted RBP3.88□□□□□ -1.79
VPS8-228ENST00000628962 MIDNQ504T8 468 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 DARS2Q6PI48 645 aaKnown RBP3.88□□□□□ -1.79
VPS8-228ENST00000628962 USP45Q70EL2 814 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 OVCH2Q7RTZ1 564 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 SMAP1Q8IYB5 467 aaPredicted RBP3.88□□□□□ -1.79
VPS8-228ENST00000628962 DCBLD1Q8N8Z6 715 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 OR2I1PQ8NGU4 316 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 PPP1R35Q8TAP8 253 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 ADAMTS15Q8TE58 950 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 UBE2Q2Q8WVN8 375 aa3.88□□□□□ -1.79
VPS8-228ENST00000628962 C1GALT1C1Q96EU7 318 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms