RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 PRPF39Q86UA1 669 aaKnown RBP11.55□□□□□ -0.56
VPS8-227ENST00000625842 C4orf19Q8IY42 314 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 INTS9Q9NV88 658 aaKnown RBP11.55□□□□□ -0.56
VPS8-227ENST00000625842 TRMT6Q9UJA5 497 aaKnown RBP11.55□□□□□ -0.56
VPS8-227ENST00000625842 NRXN1Q9ULB1 1477 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 H3BM21 787 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 VPS26AO75436 327 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 GUCA1CO95843 209 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 GNA13Q14344 377 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 DACT2Q5SW24 774 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 PRUNE1Q86TP1 453 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 TRIM55Q9BYV6 548 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 SOHLH2Q9NX45 425 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 CD274Q9NZQ7 290 aa11.55□□□□□ -0.56
VPS8-227ENST00000625842 OR6C75A6NL08 312 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 HNRNPRO43390 633 aaKnown RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 SULT2A1Q06520 285 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 XRCC4Q13426 336 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 NAA30Q147X3 362 aaPredicted RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 SPDYAQ5MJ70 313 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 ZC3H14Q6PJT7 736 aaKnown RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 FBXO28Q9NVF7 368 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 USP17L7P0C7H9 530 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 GLUD2P49448 558 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 EIF3EP60228 445 aaKnown RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 GUCY2DQ02846 1103 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 ITGA7Q13683 1181 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 SMIM5Q71RC9 77 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 ZSCAN1Q8NBB4 408 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 BHMTQ93088 406 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 TMEM159Q96B96 161 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 H2AFY2Q9P0M6 372 aaPredicted RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 SPASTQ9UBP0 616 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 VTNP04004 478 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 HNRNPH1P31943 449 aaKnown RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 ATP5C1P36542 298 aaKnown RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 HECTD3Q5T447 861 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 CATSPERGQ6ZRH7 1159 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 SYDE1Q6ZW31 735 aaPredicted RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 BBS7Q8IWZ6 715 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 SYTL5Q8TDW5 730 aaPredicted RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 CORO1BQ9BR76 489 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 FDXACB1Q9BRP7 624 aaPredicted RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 NMRK2Q9NPI5 230 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 DDX20Q9UHI6 824 aaKnown RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 APOBEC2Q9Y235 224 aaKnown RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 URADA6NGE7 173 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 LRRC72A6NJI9 287 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 FTLP02792 175 aaPredicted RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 MLNP12872 115 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 RPL9P32969 192 aaKnown RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 TBX4P57082 545 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 GRSF1Q12849 480 aaKnown RBP eCLIP11.54□□□□□ -0.56
VPS8-227ENST00000625842 NAA25Q14CX7 972 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 FOXR1Q6PIV2 292 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 CHPFQ8IZ52 775 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 CXorf40BQ96DE9 158 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 BRD8Q9H0E9 1235 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 TRIT1Q9H3H1 467 aaKnown RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 CNOT10Q9H9A5 744 aaKnown RBP11.54□□□□□ -0.56
VPS8-227ENST00000625842 NRKQ7Z2Y5 1582 aa11.54□□□□□ -0.56
VPS8-227ENST00000625842 CASTOR2A6NHX0 329 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 TCF3P15923 654 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 CDH2P19022 906 aaPredicted RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 SERPINB9P50453 376 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 NECTIN1Q15223 517 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 HSP90AA5PQ58FG0 334 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 GPR135Q8IZ08 494 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 UPF1Q92900 1129 aaKnown RBP eCLIP11.53□□□□□ -0.56
VPS8-227ENST00000625842 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 EEF2KMTQ96G04 330 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 ZNF518BQ9C0D4 1074 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 ZMYND8Q9ULU4 1186 aaPredicted RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 PPP2R2CQ9Y2T4 447 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 IRS2Q9Y4H2 1338 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 CACNB4O00305 520 aaPredicted RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 IRF6O14896 467 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 ZSCAN9O15535 394 aaPredicted RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 SPAG6O75602 509 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 ZNF286BP0CG31 522 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 MYBP10242 640 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 SERPINA4P29622 427 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 ATP2C1P98194 919 aaPredicted RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 ADCY2Q08462 1091 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 STAT4Q14765 748 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 ZBTB41Q5SVQ8 909 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 GPR158Q5T848 1215 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 MYO1HQ8N1T3 1032 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 SAYSD1Q9NPB0 183 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 PDGFCQ9NRA1 345 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 KCTD5Q9NXV2 234 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 DDX43Q9NXZ2 648 aaKnown RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 PAK5Q9P286 719 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 DRG1Q9Y295 367 aaKnown RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 PCDHA13Q9Y5I0 950 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 HDCP19113 662 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 TRPC1P48995 793 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 ESRRGP62508 458 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 LLGL2Q6P1M3 1020 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 PALB2Q86YC2 1186 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms