RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 CAPN11Q9UMQ6 739 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 MAGED2Q9UNF1 606 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 SCAF8Q9UPN6 1271 aaKnown RBP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 SHOC2Q9UQ13 582 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 MTO1Q9Y2Z2 717 aaKnown RBP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 CEP83Q9Y592 693 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 ADM5C9JUS6 153 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 SYT5O00445 386 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 RNASET2O00584 256 aaKnown RBP3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 ASNA1O43681 348 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 SKAP2O75563 359 aaPredicted RBP3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 PIAS2O75928 621 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 NDUFA10O95299 355 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 RHOP08100 348 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 C1SP09871 688 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 HGFP14210 728 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 PPP3CBP16298 524 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 ZNF20P17024 532 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 TPH1P17752 444 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 EGR1P18146 543 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 ITGALP20701 1170 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 DDX6P26196 483 aaKnown RBP eCLIP3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 CD6P30203 668 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 PPIFP30405 207 aaKnown RBP3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 ATICP31939 592 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 GRK6P43250 576 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 HNRNPMP52272 730 aaKnown RBP eCLIP3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 COPAP53621 1224 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 RPS7P62081 194 aaKnown RBP3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 RESTQ13127 1097 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 BLMHQ13867 455 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 PFKFB4Q16877 469 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 TMEM95Q3KNT9 176 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 MGAT5BQ3V5L5 792 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 ZACNQ401N2 412 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 PREPLQ4J6C6 727 aaPredicted RBP3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 CCDC38Q502W7 563 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 USP39Q53GS9 565 aaKnown RBP3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 FBLN7Q53RD9 439 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 TMTC4Q5T4D3 741 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 MANEALQ5VSG8 457 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 LDHAL6AQ6ZMR3 332 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 MICALCLQ6ZW33 695 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 SUGP1Q8IWZ8 645 aaKnown RBP3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 ZNF276Q8N554 614 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 MYRIPQ8NFW9 859 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 SSH3Q8TE77 659 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 CACTINQ8WUQ7 758 aaKnown RBP3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 ASB10Q8WXI3 467 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 LPIN2Q92539 896 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 SNX19Q92543 992 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 MOGAT1Q96PD6 335 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 HERPUD2Q9BSE4 406 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 PTDSS2Q9BVG9 487 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 ALOXE3Q9BYJ1 711 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 PCDHAC1Q9H158 963 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 DEF6Q9H4E7 631 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 ZMYND8Q9ULU4 1186 aaPredicted RBP3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 GPR52Q9Y2T5 361 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 SNX14Q9Y5W7 946 aa3.29□□□□□ -1.88
SCARNA4-202ENST00000625402 FER1L4A9Z1Z3 1794 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 SPATA31A3Q5VYP0 1347 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 A0A0B4J269 797 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 CENPVL1A0A0U1RR11 272 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 CCDC189A1A4V9 331 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 GAGE12BA1L429 117 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 GAGE12HA6NDE8 117 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 MYADML2A6NDP7 307 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 GOLGA6L3A6NEY3 463 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 BTBD11A6QL63 1104 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 PIP5K1BO14986 540 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 CD3EAPO15446 510 aaKnown RBP3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 DHHO43323 396 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 CDKL5O76039 1030 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 RECQL4O94761 1208 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 RASAL1O95294 804 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 VNN1O95497 513 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 XRCC6P12956 609 aaKnown RBP eCLIP3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 LRPAP1P30533 357 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 NTSR1P30989 418 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 SERPINF1P36955 418 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 PNLIPRP1P54315 467 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 DGCR2P98153 550 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 PLP2Q04941 152 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 TUBB3Q13509 450 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 TP53BP2Q13625 1128 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 FHL3Q13643 280 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 SPARCL1Q14515 664 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 HLXQ14774 488 aaPredicted RBP3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 INSCQ1MX18 579 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 ABLIM2Q6H8Q1 611 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 JMJD6Q6NYC1 403 aaPredicted RBP3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 PGBD2Q6P3X8 592 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 FOXR2Q6PJQ5 311 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 LAYNQ6UX15 382 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 RNF207Q6ZRF8 634 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 RHOUQ7L0Q8 258 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 SDR16C5Q8N3Y7 309 aa3.28□□□□□ -1.88
SCARNA4-202ENST00000625402 CHST13Q8NET6 341 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms