RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 GLIS3Q8NEA6 775 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 TTC16Q8NEE8 873 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 OR5B17Q8NGF7 314 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 SH3RF2Q8TEC5 729 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 KBTBD7Q8WVZ9 684 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 DDX1Q92499 740 aaKnown RBP11.86□□□□□ -0.51
DDX41-218ENST00000625286 CD101Q93033 1021 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 PCIF1Q9H4Z3 704 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 MRPL44Q9H9J2 332 aaKnown RBP11.86□□□□□ -0.51
DDX41-218ENST00000625286 TRPC7Q9HCX4 862 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 CRTAC1Q9NQ79 661 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 VPS45Q9NRW7 570 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 ANGPTL2Q9UKU9 493 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 WASF3Q9UPY6 502 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 KIF3AQ9Y496 699 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 PCDHGA5Q9Y5G8 931 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 SNX9Q9Y5X1 595 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 ZFYVE26Q68DK2 2539 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 CACNA1EQ15878 2313 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 PCNX2A6NKB5 2137 aa11.86□□□□□ -0.51
DDX41-218ENST00000625286 HELZP42694 1942 aaKnown RBP11.86□□□□□ -0.51
DDX41-218ENST00000625286 BCLAF3A2AJT9 711 aaKnown RBP11.85□□□□□ -0.51
DDX41-218ENST00000625286 TULP1O00294 542 aaPredicted RBP11.85□□□□□ -0.51
DDX41-218ENST00000625286 HUS1O60921 280 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 TOP3BO95985 862 aaKnown RBP11.85□□□□□ -0.51
DDX41-218ENST00000625286 BCKDHBP21953 392 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 ABCD1P33897 745 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 HOXD13P35453 343 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 PNPLA4P41247 253 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 PI4KAP42356 2102 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 RPL10AP62906 217 aaKnown RBP11.85□□□□□ -0.51
DDX41-218ENST00000625286 CFAP221Q4G0U5 840 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 CC2D1AQ6P1N0 951 aaPredicted RBP11.85□□□□□ -0.51
DDX41-218ENST00000625286 SCN4BQ8IWT1 228 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 LRRC52Q8N7C0 313 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 RASSF8Q8NHQ8 419 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 USP33Q8TEY7 942 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 HVCN1Q96D96 273 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 ZNF560Q96MR9 790 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 ACCSQ96QU6 501 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 PANK2Q9BZ23 570 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 MTMR12Q9C0I1 747 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 RNF38Q9H0F5 515 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 TMEM206Q9H813 350 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 TMEM30AQ9NV96 361 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 RBAKQ9NYW8 714 aaPredicted RBP11.85□□□□□ -0.51
DDX41-218ENST00000625286 SMC3Q9UQE7 1217 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 DMXL2Q8TDJ6 3036 aa11.85□□□□□ -0.51
DDX41-218ENST00000625286 TRAV19A0A0A6YYK7 116 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 LNP1A1A4G5 178 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 FRMD3A2A2Y4 597 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 C4orf47A7E2U8 309 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 PATE3B3GLJ2 98 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 CDX4O14627 284 aaPredicted RBP11.84□□□□□ -0.51
DDX41-218ENST00000625286 PRPF6O94906 941 aaKnown RBP11.84□□□□□ -0.51
DDX41-218ENST00000625286 APBB3O95704 486 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 CAVIN2O95810 425 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 USP17L7P0C7H9 530 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 TCF3P15923 654 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 HDCP19113 662 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 GARTP22102 1010 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 SLC6A11P48066 632 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 CACNA2D1P54289 1103 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 SEC13P55735 322 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 PSMC1P62191 440 aaKnown RBP11.84□□□□□ -0.51
DDX41-218ENST00000625286 CREB5Q02930 508 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 PSMD2Q13200 908 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 FBXO43Q4G163 708 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 C2orf27AQ580R0 203 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 RNF43Q68DV7 783 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 PSAPL1Q6NUJ1 521 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 TMEM92Q6UXU6 159 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 BRAPQ7Z569 592 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 RASSF3Q86WH2 238 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 ADGRF2Q8IZF7 708 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 ADGRG2Q8IZP9 1017 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 TMEM86AQ8N2M4 240 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 CPA6Q8N4T0 437 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 TOP6BLQ8N6T0 577 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 FRMD1Q8N878 549 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 ATP2A3Q93084 1043 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 HPS3Q969F9 1004 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 TPSD1Q9BZJ3 242 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 UXTQ9UBK9 157 aaPredicted RBP11.84□□□□□ -0.51
DDX41-218ENST00000625286 ITGA11Q9UKX5 1188 aa11.84□□□□□ -0.51
DDX41-218ENST00000625286 SRPRBQ9Y5M8 271 aaKnown RBP11.84□□□□□ -0.51
DDX41-218ENST00000625286 SCAMP3O14828 347 aaKnown RBP11.83□□□□□ -0.52
DDX41-218ENST00000625286 GCNT3O95395 438 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 BMP15O95972 392 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 CST3P01034 146 aaPredicted RBP11.83□□□□□ -0.52
DDX41-218ENST00000625286 CKMP06732 381 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 KRT19P08727 400 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 PDGFRBP09619 1106 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 BDNFP23560 247 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 MAGEA11P43364 429 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 IFNAR2P48551 515 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 DGKEP52429 567 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 RBP5P82980 135 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 AMPD2Q01433 879 aa11.83□□□□□ -0.52
DDX41-218ENST00000625286 MYL7Q01449 175 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms