RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SDHAF4Q5VUM1 108 aa15.02■□□□□ -0
SNX1-214ENST00000625244 PDCD7Q8N8D1 485 aaKnown RBP15.02■□□□□ -0
SNX1-214ENST00000625244 SPPL2BQ8TCT7 592 aa15.02■□□□□ -0
SNX1-214ENST00000625244 LRRC15Q8TF66 581 aa15.02■□□□□ -0
SNX1-214ENST00000625244 FCRL3Q96P31 734 aaPredicted RBP15.02■□□□□ -0
SNX1-214ENST00000625244 LARP6Q9BRS8 491 aaKnown RBP15.02■□□□□ -0
SNX1-214ENST00000625244 CLMPQ9H6B4 373 aa15.02■□□□□ -0
SNX1-214ENST00000625244 PRDM16Q9HAZ2 1276 aa15.02■□□□□ -0
SNX1-214ENST00000625244 IL21RQ9HBE5 538 aa15.02■□□□□ -0
SNX1-214ENST00000625244 UBQLN1Q9UMX0 589 aaKnown RBP15.02■□□□□ -0
SNX1-214ENST00000625244 COL6A6A6NMZ7 2263 aa15.02□□□□□ -0.01
SNX1-214ENST00000625244 OBSL1O75147 1896 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 TRAV19A0A0A6YYK7 116 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 IGHV1OR15-9A0A0B4J2B8 117 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 TTC26A0AVF1 554 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 GOLGA8CPA6NN73 597 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 CAPN9O14815 690 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 USP17L7P0C7H9 530 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 TOB2Q14106 344 aaPredicted RBP15.01□□□□□ -0.01
SNX1-214ENST00000625244 NOLC1Q14978 699 aaKnown RBP eCLIP15.01□□□□□ -0.01
SNX1-214ENST00000625244 GALNT15Q8N3T1 639 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 BAHD1Q8TBE0 780 aaPredicted RBP15.01□□□□□ -0.01
SNX1-214ENST00000625244 C2orf15Q8WU43 125 aaKnown RBP15.01□□□□□ -0.01
SNX1-214ENST00000625244 TNFRSF25Q93038 417 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 TMEM60Q9H2L4 133 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 TMEM206Q9H813 350 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 PLEKHA5Q9HAU0 1116 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 CALCOCO1Q9P1Z2 691 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 ARHGAP28Q9P2N2 729 aa15.01□□□□□ -0.01
SNX1-214ENST00000625244 STK36Q9NRP7 1315 aa15□□□□□ -0.01
SNX1-214ENST00000625244 KAT7O95251 611 aa15□□□□□ -0.01
SNX1-214ENST00000625244 CYP11A1P05108 521 aa15□□□□□ -0.01
SNX1-214ENST00000625244 CSH1P0DML2 217 aa15□□□□□ -0.01
SNX1-214ENST00000625244 CSH2P0DML3 217 aa15□□□□□ -0.01
SNX1-214ENST00000625244 GABRG2P18507 467 aa15□□□□□ -0.01
SNX1-214ENST00000625244 EIF2S3P41091 472 aaKnown RBP15□□□□□ -0.01
SNX1-214ENST00000625244 ZXDBP98169 803 aa15□□□□□ -0.01
SNX1-214ENST00000625244 SCRN1Q12765 414 aa15□□□□□ -0.01
SNX1-214ENST00000625244 STK3Q13188 491 aa15□□□□□ -0.01
SNX1-214ENST00000625244 ECM1Q16610 540 aa15□□□□□ -0.01
SNX1-214ENST00000625244 C12orf40Q86WS4 652 aa15□□□□□ -0.01
SNX1-214ENST00000625244 RGL4Q8IZJ4 473 aa15□□□□□ -0.01
SNX1-214ENST00000625244 ARL14EPQ8N8R7 260 aaPredicted RBP15□□□□□ -0.01
SNX1-214ENST00000625244 PNKPQ96T60 521 aa15□□□□□ -0.01
SNX1-214ENST00000625244 HAPLN2Q9GZV7 340 aa15□□□□□ -0.01
SNX1-214ENST00000625244 BHMT2Q9H2M3 363 aa15□□□□□ -0.01
SNX1-214ENST00000625244 FAM124BQ9H5Z6 455 aaPredicted RBP15□□□□□ -0.01
SNX1-214ENST00000625244 GCNT4Q9P109 453 aa15□□□□□ -0.01
SNX1-214ENST00000625244 KNL1Q8NG31 2342 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 MYO18AQ92614 2054 aaKnown RBP14.99□□□□□ -0.01
SNX1-214ENST00000625244 C2orf78A6NCI8 922 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 MYMKA6NI61 221 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 LACTBL1A8MY62 500 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 TOM1L1O75674 476 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 APODP05090 189 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 CYP17A1P05093 508 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 MAOBP27338 520 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 RPA1P27694 616 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 DAW1Q8N136 415 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 SPATA18Q8TC71 538 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 ZNF419Q96HQ0 510 aaPredicted RBP14.99□□□□□ -0.01
SNX1-214ENST00000625244 PI4K2AQ9BTU6 479 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 ZDHHC5Q9C0B5 715 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 KMT5AQ9NQR1 393 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 TMLHEQ9NVH6 421 aa14.99□□□□□ -0.01
SNX1-214ENST00000625244 A0A0A0MRY4 1105 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 TLX3O43711 291 aaPredicted RBP14.98□□□□□ -0.01
SNX1-214ENST00000625244 NOL4O94818 638 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 TCF3P15923 654 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 TNFSF9P41273 254 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 KCNC4Q03721 635 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 SMARCB1Q12824 385 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 SAFBQ15424 915 aaKnown RBP eCLIP14.98□□□□□ -0.01
SNX1-214ENST00000625244 SMAD1Q15797 465 aaKnown RBP14.98□□□□□ -0.01
SNX1-214ENST00000625244 DDR2Q16832 855 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 CPLX2Q6PUV4 134 aaKnown RBP14.98□□□□□ -0.01
SNX1-214ENST00000625244 ADGRG2Q8IZP9 1017 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 KIF2CQ99661 725 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 CD93Q9NPY3 652 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 ARHGEF4Q9NR80 690 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 SUSD2Q9UGT4 822 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 ARHGAP26Q9UNA1 814 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 CYP8B1Q9UNU6 501 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 FNDC3AQ9Y2H6 1198 aaKnown RBP14.98□□□□□ -0.01
SNX1-214ENST00000625244 TSC2P49815 1807 aa14.98□□□□□ -0.01
SNX1-214ENST00000625244 PLK4O00444 970 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 SLC16A4O15374 487 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 PRPF40AO75400 957 aaKnown RBP14.97□□□□□ -0.01
SNX1-214ENST00000625244 CLTAP09496 248 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 HLA-EP13747 358 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 GNSP15586 552 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 XBP1P17861 261 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 KRT2P35908 639 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 GRIA2P42262 883 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 KDSRQ06136 332 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 MCL1Q07820 350 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 SRSF1Q07955 248 aaKnown RBP eCLIP14.97□□□□□ -0.01
SNX1-214ENST00000625244 DHCR24Q15392 516 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 SPATA1Q5VX52 437 aa14.97□□□□□ -0.01
SNX1-214ENST00000625244 C9orf57Q5W0N0 161 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms