RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 NXF1Q9UBU9 619 aaKnown RBP14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 GINS2Q9Y248 185 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 LOXHD1Q8IVV2 1947 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 DKC1O60832 514 aaKnown RBP eCLIP14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 NOP14P78316 857 aaKnown RBP14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 STAT4Q14765 748 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 TMEM154Q6P9G4 183 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 TEX9Q8N6V9 391 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 SPATA33Q96N06 139 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 C17orf75Q9HAS0 396 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 PREBQ9HCU5 417 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 GALNT8Q9NY28 637 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 EURLQ9NYK6 297 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 NEU2Q9Y3R4 380 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 MYPNQ86TC9 1320 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 MAPK13O15264 365 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 TCEA3O75764 348 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 KRT19P08727 400 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 TPBGLP0DKB5 382 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 CALB2P22676 271 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 RPL7AP62424 266 aaKnown RBP14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 NCOA4Q13772 614 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 TAF1BQ53T94 588 aaPredicted RBP14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 LMNTD2Q8IXW0 634 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 CCDC89Q8N998 374 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 LRMDAQ9H2I8 198 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 RNPEPQ9H4A4 650 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 MINDY3Q9H8M7 445 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 NPHS2Q9NP85 383 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 NRBP2Q9NSY0 501 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 USH1CQ9Y6N9 552 aa14.06□□□□□ -0.16
PCDHB17P-202ENST00000623466 LTBP3Q9NS15 1303 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 ATF7P17544 494 aaPredicted RBP14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 GNAZP19086 355 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 GNA15P30679 374 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 RFC5P40937 340 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 NSFP46459 744 aaKnown RBP14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 LAMTOR4Q0VGL1 99 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 KLF1Q13351 362 aaPredicted RBP14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 ACVR2BQ13705 512 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 MOGSQ13724 837 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 PSMD6Q15008 389 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 EEF1DP3Q658K8 133 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 RIOX2Q8IUF8 465 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 ANKMY2Q8IV38 441 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 LRRC8CQ8TDW0 803 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 KLF6Q99612 283 aaPredicted RBP14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 DENND2DQ9H6A0 471 aaPredicted RBP14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 UBN1Q9NPG3 1134 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 DNPEPQ9ULA0 475 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 ZNF148Q9UQR1 794 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 PHIPQ8WWQ0 1821 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 A0A0B4J269 797 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 GOLGA8RI6L899 631 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 ZNF189O75820 626 aaPredicted RBP14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 CNMDO75829 334 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 ATG7O95352 703 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 NAMPTP43490 491 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 RAP1GAPP47736 663 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 CD151P48509 253 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 CDH8P55286 799 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 CUL2Q13617 745 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 SPARCL1Q14515 664 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 RFWD3Q6PCD5 774 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 SDCCAG8Q86SQ7 713 aaPredicted RBP14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 RBBP8NLQ8NC74 664 aaPredicted RBP14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 DNERQ8NFT8 737 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 VTI1AQ96AJ9 217 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 GRAMD1AQ96CP6 724 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 OPTNQ96CV9 577 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 C10orf88Q9H8K7 445 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 DLGAP2Q9P1A6 1054 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 STARD13Q9Y3M8 1113 aa14.05□□□□□ -0.16
PCDHB17P-202ENST00000623466 PIK3R2O00459 728 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 NPTXRO95502 500 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 UNGP13051 313 aaPredicted RBP14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 SKIV2L2P42285 1042 aaKnown RBP14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 YARSP54577 528 aaKnown RBP14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 CAV1Q03135 178 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 MPP3Q13368 585 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 C15orf39Q6ZRI6 1047 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 USP37Q86T82 979 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 MTDHQ86UE4 582 aaKnown RBP14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 ZBED8Q8IZ13 594 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 DENND1AQ8TEH3 1009 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 STK32AQ8WU08 396 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 TJP2Q9UDY2 1190 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 ASB3Q9Y575 518 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 ADCY3O60266 1144 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 IFNB1P01574 187 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 IQCF3P0C7M6 154 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 POTEJP0CG39 1038 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 TXNP10599 105 aaKnown RBP14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 ACO1P21399 889 aaKnown RBP14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 PTDSS1P48651 473 aaKnown RBP14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 GAD2Q05329 585 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 PLEKHG4Q58EX7 1191 aa14.04□□□□□ -0.16
PCDHB17P-202ENST00000623466 C9orf131Q5VYM1 1079 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms