RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 A0A087X0B3 334 aa25.48■■□□□ 1.67
CPSF1-214ENST00000622776 MAGEA11P43364 429 aa25.48■■□□□ 1.67
CPSF1-214ENST00000622776 IFNAR2P48551 515 aa25.48■■□□□ 1.67
CPSF1-214ENST00000622776 USP4Q13107 963 aa25.48■■□□□ 1.67
CPSF1-214ENST00000622776 LMBRD2Q68DH5 695 aaPredicted RBP25.48■■□□□ 1.67
CPSF1-214ENST00000622776 IL31Q6EBC2 164 aa25.48■■□□□ 1.67
CPSF1-214ENST00000622776 DPH6Q7L8W6 267 aa25.48■■□□□ 1.67
CPSF1-214ENST00000622776 ANKRD36BP1Q96IX9 119 aa25.48■■□□□ 1.67
CPSF1-214ENST00000622776 HHIPQ96QV1 700 aa25.48■■□□□ 1.67
CPSF1-214ENST00000622776 INTS13Q9NVM9 706 aa25.48■■□□□ 1.67
CPSF1-214ENST00000622776 GCNT4Q9P109 453 aa25.48■■□□□ 1.67
CPSF1-214ENST00000622776 R3HCC1Q9Y3T6 440 aaKnown RBP25.48■■□□□ 1.67
CPSF1-214ENST00000622776 MYO1EQ12965 1108 aa25.47■■□□□ 1.67
CPSF1-214ENST00000622776 EML3Q32P44 896 aa25.47■■□□□ 1.67
CPSF1-214ENST00000622776 ARL14EPQ8N8R7 260 aaPredicted RBP25.47■■□□□ 1.67
CPSF1-214ENST00000622776 FSIP1Q8NA03 581 aa25.47■■□□□ 1.67
CPSF1-214ENST00000622776 OR5B17Q8NGF7 314 aa25.47■■□□□ 1.67
CPSF1-214ENST00000622776 RPLP0P6Q8NHW5 317 aa25.47■■□□□ 1.67
CPSF1-214ENST00000622776 EZH1Q92800 747 aaPredicted RBP25.47■■□□□ 1.67
CPSF1-214ENST00000622776 CD101Q93033 1021 aa25.47■■□□□ 1.67
CPSF1-214ENST00000622776 ATP2A3Q93084 1043 aa25.47■■□□□ 1.67
CPSF1-214ENST00000622776 ZC3H10Q96K80 434 aaKnown RBP25.47■■□□□ 1.67
CPSF1-214ENST00000622776 PCDHGA5Q9Y5G8 931 aa25.47■■□□□ 1.67
CPSF1-214ENST00000622776 ANAPC1Q9H1A4 1944 aa25.47■■□□□ 1.67
CPSF1-214ENST00000622776 CEP295Q9C0D2 2601 aa25.47■■□□□ 1.67
CPSF1-214ENST00000622776 EML5Q05BV3 1969 aa25.46■■□□□ 1.67
CPSF1-214ENST00000622776 KIAA0391O15091 583 aaKnown RBP25.46■■□□□ 1.67
CPSF1-214ENST00000622776 ATP2C2O75185 946 aa25.46■■□□□ 1.67
CPSF1-214ENST00000622776 KRT37O76014 449 aa25.46■■□□□ 1.67
CPSF1-214ENST00000622776 SYT1P21579 422 aa25.46■■□□□ 1.67
CPSF1-214ENST00000622776 C4orf50Q6ZRC1 276 aa25.46■■□□□ 1.67
CPSF1-214ENST00000622776 SYT13Q7L8C5 426 aa25.46■■□□□ 1.67
CPSF1-214ENST00000622776 LIMS2Q7Z4I7 341 aa25.46■■□□□ 1.67
CPSF1-214ENST00000622776 CCDC65Q8IXS2 484 aa25.46■■□□□ 1.67
CPSF1-214ENST00000622776 SH3RF2Q8TEC5 729 aa25.46■■□□□ 1.67
CPSF1-214ENST00000622776 HPDLQ96IR7 371 aa25.46■■□□□ 1.67
CPSF1-214ENST00000622776 SYT15Q9BQS2 421 aa25.46■■□□□ 1.67
CPSF1-214ENST00000622776 RXFP3Q9NSD7 469 aa25.46■■□□□ 1.67
CPSF1-214ENST00000622776 MAGEC2Q9UBF1 373 aaPredicted RBP25.46■■□□□ 1.67
CPSF1-214ENST00000622776 MORC2Q9Y6X9 1032 aaPredicted RBP25.46■■□□□ 1.67
CPSF1-214ENST00000622776 PTPRJQ12913 1337 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 C2orf78A6NCI8 922 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 TNNC2P02585 160 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 HDCP19113 662 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 KCNA4P22459 653 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 LMO2P25791 158 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 NR1H3Q13133 447 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 KCNB1Q14721 858 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 SLC39A14Q15043 492 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 PLK5Q496M5 336 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 PLA2G2CQ5R387 149 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 KBTBD7Q8WVZ9 684 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 USP28Q96RU2 1077 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 CDH9Q9ULB4 789 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 USP24Q9UPU5 2620 aa25.45■■□□□ 1.66
CPSF1-214ENST00000622776 ZNF233A6NK53 670 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 TM4SF5O14894 197 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 TCF3P15923 654 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 PSMC1P62191 440 aaKnown RBP25.44■■□□□ 1.66
CPSF1-214ENST00000622776 PSMD2Q13200 908 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 DMC1Q14565 340 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 SURF1Q15526 300 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 DUOXA2Q1HG44 320 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 VSTM1Q6UX27 236 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 CBWD2Q8IUF1 395 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 PDILTQ8N807 584 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 MYLPFQ96A32 169 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 ACDQ96AP0 544 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 SPATA17Q96L03 361 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 LINC00597Q9H2U6 94 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 SMOC1Q9H4F8 434 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 CRTAC1Q9NQ79 661 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 ARHGAP26Q9UNA1 814 aa25.44■■□□□ 1.66
CPSF1-214ENST00000622776 APBB3O95704 486 aa25.43■■□□□ 1.66
CPSF1-214ENST00000622776 BDNFP23560 247 aa25.43■■□□□ 1.66
CPSF1-214ENST00000622776 MPLP40238 635 aa25.43■■□□□ 1.66
CPSF1-214ENST00000622776 MAPRE1Q15691 268 aaKnown RBP25.43■■□□□ 1.66
CPSF1-214ENST00000622776 STPG1Q5TH74 334 aa25.43■■□□□ 1.66
CPSF1-214ENST00000622776 STXBP4Q6ZWJ1 553 aa25.43■■□□□ 1.66
CPSF1-214ENST00000622776 GLIS3Q8NEA6 775 aa25.43■■□□□ 1.66
CPSF1-214ENST00000622776 DUSP15Q9H1R2 295 aaPredicted RBP25.43■■□□□ 1.66
CPSF1-214ENST00000622776 EBF1Q9UH73 591 aa25.43■■□□□ 1.66
CPSF1-214ENST00000622776 ABCA7Q8IZY2 2146 aa25.43■■□□□ 1.66
CPSF1-214ENST00000622776 PDGFRBP09619 1106 aa25.42■■□□□ 1.66
CPSF1-214ENST00000622776 WARSP23381 471 aaKnown RBP25.42■■□□□ 1.66
CPSF1-214ENST00000622776 GRIK1P39086 918 aa25.42■■□□□ 1.66
CPSF1-214ENST00000622776 HPS3Q969F9 1004 aa25.42■■□□□ 1.66
CPSF1-214ENST00000622776 CEP295NLQ96MC4 621 aa25.42■■□□□ 1.66
CPSF1-214ENST00000622776 VPS45Q9NRW7 570 aa25.42■■□□□ 1.66
CPSF1-214ENST00000622776 PDE6CP51160 858 aa25.41■■□□□ 1.66
CPSF1-214ENST00000622776 USP46P62068 366 aa25.41■■□□□ 1.66
CPSF1-214ENST00000622776 ELF2Q15723 593 aa25.41■■□□□ 1.66
CPSF1-214ENST00000622776 DENND5BQ6ZUT9 1274 aa25.41■■□□□ 1.66
CPSF1-214ENST00000622776 MMS19Q96T76 1030 aa25.41■■□□□ 1.66
CPSF1-214ENST00000622776 HSPBP1Q9NZL4 362 aa25.41■■□□□ 1.66
CPSF1-214ENST00000622776 TRPM5Q9NZQ8 1165 aa25.41■■□□□ 1.66
CPSF1-214ENST00000622776 MTMR6Q9Y217 621 aa25.41■■□□□ 1.66
CPSF1-214ENST00000622776 DCLK1O15075 740 aa25.4■■□□□ 1.66
CPSF1-214ENST00000622776 RHOBTB1O94844 696 aa25.4■■□□□ 1.66
CPSF1-214ENST00000622776 NFATC1O95644 943 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms