RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 TMEM139Q8IV31 216 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 ZNF606Q8WXB4 792 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 EML4Q9HC35 981 aaKnown RBP16.8■□□□□ 0.28
GABRB3-215ENST00000622697 PIH1D1Q9NWS0 290 aaKnown RBP16.8■□□□□ 0.28
GABRB3-215ENST00000622697 CD4P01730 458 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 BGNP21810 368 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 EPHB2P29323 1055 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 RNF217Q8TC41 542 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 DNAJC18Q9H819 358 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 MRPL40Q9NQ50 206 aaKnown RBP16.8■□□□□ 0.28
GABRB3-215ENST00000622697 TRADDQ15628 312 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 SLC15A2Q16348 729 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 BTNL9Q6UXG8 535 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 SZRD1Q7Z422 152 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 ZCWPW1Q9H0M4 648 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 DLGAP2Q9P1A6 1054 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 FRMPD4Q14CM0 1322 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 MEIS2O14770 477 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 TNPO2O14787 897 aaKnown RBP16.8■□□□□ 0.28
GABRB3-215ENST00000622697 SHBGP04278 402 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 SNX19Q92543 992 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 CEP41Q9BYV8 373 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 LRRC4BQ9NT99 713 aa16.8■□□□□ 0.28
GABRB3-215ENST00000622697 CXCL9Q07325 125 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 FAM131BQ86XD5 332 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 IRF2BP1Q8IU81 584 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 PURBQ96QR8 312 aaKnown RBP16.79■□□□□ 0.28
GABRB3-215ENST00000622697 KCNMB3Q9NPA1 279 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 SUFUQ9UMX1 484 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 C1orf186Q6ZWK4 172 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 RXFP2Q8WXD0 754 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.79■□□□□ 0.28
GABRB3-215ENST00000622697 PCDHA3Q9Y5H8 950 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 PMPCBO75439 489 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 KLHL2O95198 593 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 SLC25A27O95847 323 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 SSTR1P30872 391 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 DDR1Q08345 913 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 EFHC1Q5JVL4 640 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 PACS2Q86VP3 889 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 LNX1Q8TBB1 728 aaPredicted RBP16.79■□□□□ 0.28
GABRB3-215ENST00000622697 ASTN1O14525 1302 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 CDH8P55286 799 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 SNAPC2Q13487 334 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 LRP10Q7Z4F1 713 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 C3orf20Q8ND61 904 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 DDIT4Q9NX09 232 aa16.79■□□□□ 0.28
GABRB3-215ENST00000622697 PIK3CDO00329 1044 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 ANGPT2O15123 496 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 ZSCAN5DPP0CG00 497 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 PDAP1Q13442 181 aaKnown RBP16.78■□□□□ 0.28
GABRB3-215ENST00000622697 SV2CQ496J9 727 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 MFSD7Q6UXD7 560 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 ASAP3Q8TDY4 903 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 TRAPPC12Q8WVT3 735 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 ASIC4Q96FT7 647 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 MRPL1Q9BYD6 325 aaKnown RBP16.78■□□□□ 0.28
GABRB3-215ENST00000622697 RPS6KA5O75582 802 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 ACADSBP45954 432 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 CERS5Q8N5B7 392 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 FAM163AQ96GL9 167 aaPredicted RBP16.78■□□□□ 0.28
GABRB3-215ENST00000622697 FGFBP2Q9BYJ0 223 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 DNPEPQ9ULA0 475 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 A0A087WZ62 844 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 SYCE1LA8MT33 242 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 AKAP10O43572 662 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 GLRBP48167 497 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 LAMTOR4Q0VGL1 99 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 DAB2IPQ5VWQ8 1189 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 PRUNE1Q86TP1 453 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 CMTM5Q96DZ9 223 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 FDXACB1Q9BRP7 624 aaPredicted RBP16.78■□□□□ 0.28
GABRB3-215ENST00000622697 GANQ9H2C0 597 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 KDM4CQ9H3R0 1056 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 FAM198AQ9UFP1 575 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 PECAM1P16284 738 aaPredicted RBP16.78■□□□□ 0.28
GABRB3-215ENST00000622697 MARCKSL1P49006 195 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 SHROOM1Q2M3G4 852 aaPredicted RBP16.78■□□□□ 0.28
GABRB3-215ENST00000622697 TEDDM1Q5T9Z0 273 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 NOTUMQ6P988 496 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 SPATA20Q8TB22 786 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 EME1Q96AY2 570 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 NINJ2Q9NZG7 142 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 SMAPO00193 183 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 ACO1P21399 889 aaKnown RBP16.78■□□□□ 0.28
GABRB3-215ENST00000622697 TGM2P21980 687 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 PDCD2Q16342 344 aaPredicted RBP16.78■□□□□ 0.28
GABRB3-215ENST00000622697 C4orf32Q8N8J7 132 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 TNFRSF25Q93038 417 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 CDYLQ9Y232 598 aa16.78■□□□□ 0.28
GABRB3-215ENST00000622697 VDRP11473 427 aa16.77■□□□□ 0.28
GABRB3-215ENST00000622697 SERPINB4P48594 390 aa16.77■□□□□ 0.28
GABRB3-215ENST00000622697 EFHBQ8N7U6 833 aa16.77■□□□□ 0.28
GABRB3-215ENST00000622697 GPRC5AQ8NFJ5 357 aa16.77■□□□□ 0.28
GABRB3-215ENST00000622697 PRDM5Q9NQX1 630 aaPredicted RBP16.77■□□□□ 0.28
GABRB3-215ENST00000622697 SAE1Q9UBE0 346 aaPredicted RBP16.77■□□□□ 0.28
GABRB3-215ENST00000622697 MAPRE2Q15555 327 aa16.77■□□□□ 0.28
GABRB3-215ENST00000622697 DACT2Q5SW24 774 aa16.77■□□□□ 0.28
GABRB3-215ENST00000622697 TMEM237Q96Q45 408 aa16.77■□□□□ 0.28
GABRB3-215ENST00000622697 WDR18Q9BV38 432 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms